RNA–Protein interactions for RNA: ENST00000391052.1

RNU6-1242P-201, Transcript of RNA, U6 small nuclear 1242, pseudogene, humanhuman

BASIC

Gene RNU6-1242P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1242P-201ENST00000391052 AEBP2Q6ZN18 517 aaPredicted RBP24.19■■□□□ 1.46
RNU6-1242P-201ENST00000391052 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
RNU6-1242P-201ENST00000391052 SENP3Q9H4L4 574 aaPredicted RBP20.78■□□□□ 0.92
RNU6-1242P-201ENST00000391052 PHF23Q9BUL5 403 aaPredicted RBP20.77■□□□□ 0.92
RNU6-1242P-201ENST00000391052 PLPPR3Q6T4P5 718 aa19.41■□□□□ 0.7
RNU6-1242P-201ENST00000391052 FOXD1Q16676 465 aa19.13■□□□□ 0.65
RNU6-1242P-201ENST00000391052 ADRA2BP18089 450 aa18.38■□□□□ 0.53
RNU6-1242P-201ENST00000391052 PPP6R1Q9UPN7 881 aa18.32■□□□□ 0.52
RNU6-1242P-201ENST00000391052 PIAS4Q8N2W9 510 aaPredicted RBP18.16■□□□□ 0.5
RNU6-1242P-201ENST00000391052 MSH5O43196 834 aa17.83■□□□□ 0.44
RNU6-1242P-201ENST00000391052 SCAF1Q9H7N4 1312 aaKnown RBP17.09■□□□□ 0.33
RNU6-1242P-201ENST00000391052 PPP4R3CPQ6ZMV5 832 aa17.03■□□□□ 0.32
RNU6-1242P-201ENST00000391052 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.28
RNU6-1242P-201ENST00000391052 MAPK8IP2Q13387 824 aaPredicted RBP16.63■□□□□ 0.25
RNU6-1242P-201ENST00000391052 CNKSR2Q8WXI2 1034 aa16.61■□□□□ 0.25
RNU6-1242P-201ENST00000391052 KCNA4P22459 653 aa16.56■□□□□ 0.24
RNU6-1242P-201ENST00000391052 DMRT2Q9Y5R5 561 aa16.51■□□□□ 0.23
RNU6-1242P-201ENST00000391052 NPM3O75607 178 aaKnown RBP16.3■□□□□ 0.2
RNU6-1242P-201ENST00000391052 RNF216Q9NWF9 866 aaPredicted RBP16.27■□□□□ 0.2
RNU6-1242P-201ENST00000391052 HOXD11P31277 338 aaPredicted RBP16.14■□□□□ 0.17
RNU6-1242P-201ENST00000391052 POTEDQ86YR6 584 aa16.08■□□□□ 0.16
RNU6-1242P-201ENST00000391052 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
RNU6-1242P-201ENST00000391052 SLC4A1APQ9BWU0 796 aaKnown RBP15.9■□□□□ 0.14
RNU6-1242P-201ENST00000391052 DNAJC5BQ9UF47 199 aa15.83■□□□□ 0.12
RNU6-1242P-201ENST00000391052 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.53■□□□□ 0.08
RNU6-1242P-201ENST00000391052 EHMT2Q96KQ7 1210 aa15.4■□□□□ 0.06
RNU6-1242P-201ENST00000391052 FOXD4L1Q9NU39 408 aa15.36■□□□□ 0.05
RNU6-1242P-201ENST00000391052 SLC4A2P04920 1241 aa15.31■□□□□ 0.04
RNU6-1242P-201ENST00000391052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
RNU6-1242P-201ENST00000391052 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
RNU6-1242P-201ENST00000391052 MYCNP04198 464 aaPredicted RBP15.18■□□□□ 0.02
RNU6-1242P-201ENST00000391052 RNF39Q9H2S5 420 aa15.15■□□□□ 0.02
RNU6-1242P-201ENST00000391052 ZBTB22O15209 634 aa15.13■□□□□ 0.01
RNU6-1242P-201ENST00000391052 CSRNP3Q8WYN3 585 aa15.12■□□□□ 0.01
RNU6-1242P-201ENST00000391052 U3KPZ7 1027 aaPredicted RBP15.11■□□□□ 0.01
RNU6-1242P-201ENST00000391052 APLP2Q06481 763 aa15.1■□□□□ 0.01
RNU6-1242P-201ENST00000391052 C1QBPQ07021 282 aaKnown RBP15.08■□□□□ 0
RNU6-1242P-201ENST00000391052 SAMD1Q6SPF0 538 aaPredicted RBP15.07■□□□□ 0
RNU6-1242P-201ENST00000391052 CACNB1Q02641 598 aaPredicted RBP14.88□□□□□ -0.03
RNU6-1242P-201ENST00000391052 ATXN8OSP0DMR3 200 aa14.87□□□□□ -0.03
RNU6-1242P-201ENST00000391052 CAPN15O75808 1086 aa14.78□□□□□ -0.04
RNU6-1242P-201ENST00000391052 ZNF219Q9P2Y4 722 aaPredicted RBP14.75□□□□□ -0.05
RNU6-1242P-201ENST00000391052 TRHP20396 242 aaPredicted RBP14.69□□□□□ -0.06
RNU6-1242P-201ENST00000391052 SPINK5Q9NQ38 1064 aaPredicted RBP14.67□□□□□ -0.06
RNU6-1242P-201ENST00000391052 ATF5Q9Y2D1 282 aaPredicted RBP14.55□□□□□ -0.08
RNU6-1242P-201ENST00000391052 ABCB7O75027 752 aa14.41□□□□□ -0.1
RNU6-1242P-201ENST00000391052 DSG3P32926 999 aa14.41□□□□□ -0.1
RNU6-1242P-201ENST00000391052 POLA2Q14181 598 aa14.41□□□□□ -0.1
RNU6-1242P-201ENST00000391052 ZBTB12Q9Y330 459 aaPredicted RBP14.34□□□□□ -0.11
RNU6-1242P-201ENST00000391052 FBLN2P98095 1184 aa14.26□□□□□ -0.13
RNU6-1242P-201ENST00000391052 MKRN4PQ13434 485 aaPredicted RBP13.94□□□□□ -0.18
RNU6-1242P-201ENST00000391052 RBM42Q9BTD8 480 aaKnown RBP13.93□□□□□ -0.18
RNU6-1242P-201ENST00000391052 OSCARQ8IYS5 282 aa13.88□□□□□ -0.19
RNU6-1242P-201ENST00000391052 SPDYE2BA6NHP3 402 aa13.85□□□□□ -0.19
RNU6-1242P-201ENST00000391052 SPDYE6P0CI01 402 aa13.85□□□□□ -0.19
RNU6-1242P-201ENST00000391052 SPDYE2Q495Y8 402 aa13.85□□□□□ -0.19
RNU6-1242P-201ENST00000391052 SPDYE4A6NLX3 237 aa13.8□□□□□ -0.2
RNU6-1242P-201ENST00000391052 ZNF692Q9BU19 519 aaPredicted RBP13.8□□□□□ -0.2
RNU6-1242P-201ENST00000391052 FKBP8Q14318 412 aa13.79□□□□□ -0.2
RNU6-1242P-201ENST00000391052 AKT1S1Q96B36 256 aa13.68□□□□□ -0.22
RNU6-1242P-201ENST00000391052 SSUH2Q9Y2M2 353 aa13.64□□□□□ -0.23
RNU6-1242P-201ENST00000391052 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
RNU6-1242P-201ENST00000391052 SPDYE1Q8NFV5 336 aaPredicted RBP13.48□□□□□ -0.25
RNU6-1242P-201ENST00000391052 STAG3Q9UJ98 1225 aa13.48□□□□□ -0.25
RNU6-1242P-201ENST00000391052 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
RNU6-1242P-201ENST00000391052 FBXO3Q9UK99 471 aa13.46□□□□□ -0.25
RNU6-1242P-201ENST00000391052 PROM2Q8N271 834 aa13.44□□□□□ -0.26
RNU6-1242P-201ENST00000391052 CLEC11AQ9Y240 323 aa13.4□□□□□ -0.26
RNU6-1242P-201ENST00000391052 PITPNM1O00562 1244 aa13.3□□□□□ -0.28
RNU6-1242P-201ENST00000391052 PRR29P0C7W0 189 aa13.29□□□□□ -0.28
RNU6-1242P-201ENST00000391052 PLEKHG5O94827 1062 aa13.27□□□□□ -0.29
RNU6-1242P-201ENST00000391052 CHRDL2Q6WN34 429 aa13.23□□□□□ -0.29
RNU6-1242P-201ENST00000391052 PLCD3Q8N3E9 789 aa13.17□□□□□ -0.3
RNU6-1242P-201ENST00000391052 MIER1Q8N108 512 aa13.15□□□□□ -0.3
RNU6-1242P-201ENST00000391052 VASPP50552 380 aaPredicted RBP13.12□□□□□ -0.31
RNU6-1242P-201ENST00000391052 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
RNU6-1242P-201ENST00000391052 FXR2P51116 673 aaKnown RBP eCLIP13.04□□□□□ -0.32
RNU6-1242P-201ENST00000391052 KLHL34Q8N239 644 aa13.03□□□□□ -0.32
RNU6-1242P-201ENST00000391052 PRKAR2AP13861 404 aaKnown RBP13.02□□□□□ -0.33
RNU6-1242P-201ENST00000391052 PIP4P2Q8N4L2 257 aa13.01□□□□□ -0.33
RNU6-1242P-201ENST00000391052 NPM1P06748 294 aaKnown RBP eCLIP12.98□□□□□ -0.33
RNU6-1242P-201ENST00000391052 CREBZFQ9NS37 354 aa12.97□□□□□ -0.33
RNU6-1242P-201ENST00000391052 CHADLQ6NUI6 762 aa12.94□□□□□ -0.34
RNU6-1242P-201ENST00000391052 FARP1Q9Y4F1 1045 aaPredicted RBP12.88□□□□□ -0.35
RNU6-1242P-201ENST00000391052 IFNLR1Q8IU57 520 aaPredicted RBP12.86□□□□□ -0.35
RNU6-1242P-201ENST00000391052 SPOCK2Q92563 424 aa12.86□□□□□ -0.35
RNU6-1242P-201ENST00000391052 PAK3O75914 559 aaPredicted RBP12.81□□□□□ -0.36
RNU6-1242P-201ENST00000391052 POTEHQ6S545 545 aa12.8□□□□□ -0.36
RNU6-1242P-201ENST00000391052 MNX1P50219 401 aaPredicted RBP12.77□□□□□ -0.37
RNU6-1242P-201ENST00000391052 FAM212AQ96EL1 285 aa12.75□□□□□ -0.37
RNU6-1242P-201ENST00000391052 GSE1Q14687 1217 aa12.71□□□□□ -0.37
RNU6-1242P-201ENST00000391052 HAX1O00165 279 aa12.7□□□□□ -0.38
RNU6-1242P-201ENST00000391052 DCAF8Q5TAQ9 597 aa12.69□□□□□ -0.38
RNU6-1242P-201ENST00000391052 CIZ1Q9ULV3 898 aaPredicted RBP12.68□□□□□ -0.38
RNU6-1242P-201ENST00000391052 CD44P16070 742 aaKnown RBP12.67□□□□□ -0.38
RNU6-1242P-201ENST00000391052 NUBP1P53384 320 aa12.67□□□□□ -0.38
RNU6-1242P-201ENST00000391052 AMER1Q5JTC6 1135 aaPredicted RBP12.65□□□□□ -0.38
RNU6-1242P-201ENST00000391052 TSPYL2Q9H2G4 693 aaPredicted RBP12.64□□□□□ -0.39
RNU6-1242P-201ENST00000391052 RASEFQ8IZ41 740 aa12.62□□□□□ -0.39
RNU6-1242P-201ENST00000391052 TRIM41Q8WV44 630 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms