RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 AEBP2Q6ZN18 517 aaPredicted RBP24.5■■□□□ 1.51
RNU6-1009P-201ENST00000390996 CHIC1Q5VXU3 224 aa23.25■■□□□ 1.31
RNU6-1009P-201ENST00000390996 SENP3Q9H4L4 574 aaPredicted RBP20.83■□□□□ 0.93
RNU6-1009P-201ENST00000390996 PHF23Q9BUL5 403 aaPredicted RBP20.57■□□□□ 0.88
RNU6-1009P-201ENST00000390996 FOXD1Q16676 465 aa19.45■□□□□ 0.7
RNU6-1009P-201ENST00000390996 PLPPR3Q6T4P5 718 aa18.54■□□□□ 0.56
RNU6-1009P-201ENST00000390996 PPP6R1Q9UPN7 881 aa18.22■□□□□ 0.51
RNU6-1009P-201ENST00000390996 MSH5O43196 834 aa18.15■□□□□ 0.5
RNU6-1009P-201ENST00000390996 ADRA2BP18089 450 aa18.13■□□□□ 0.49
RNU6-1009P-201ENST00000390996 PIAS4Q8N2W9 510 aaPredicted RBP18.13■□□□□ 0.49
RNU6-1009P-201ENST00000390996 POTEDQ86YR6 584 aa17.72■□□□□ 0.43
RNU6-1009P-201ENST00000390996 MAPK8IP2Q13387 824 aaPredicted RBP16.65■□□□□ 0.26
RNU6-1009P-201ENST00000390996 DMRT2Q9Y5R5 561 aa16.55■□□□□ 0.24
RNU6-1009P-201ENST00000390996 SCAF1Q9H7N4 1312 aaKnown RBP16.52■□□□□ 0.24
RNU6-1009P-201ENST00000390996 PPP4R3CPQ6ZMV5 832 aa16.27■□□□□ 0.2
RNU6-1009P-201ENST00000390996 HOXD11P31277 338 aaPredicted RBP15.96■□□□□ 0.15
RNU6-1009P-201ENST00000390996 CNKSR2Q8WXI2 1034 aa15.96■□□□□ 0.15
RNU6-1009P-201ENST00000390996 RNF216Q9NWF9 866 aaPredicted RBP15.83■□□□□ 0.12
RNU6-1009P-201ENST00000390996 DCAF8L1A6NGE4 600 aa15.77■□□□□ 0.12
RNU6-1009P-201ENST00000390996 NCBP3Q53F19 620 aaKnown RBP15.61■□□□□ 0.09
RNU6-1009P-201ENST00000390996 CACNB1Q02641 598 aaPredicted RBP15.54■□□□□ 0.08
RNU6-1009P-201ENST00000390996 RNF39Q9H2S5 420 aa15.53■□□□□ 0.08
RNU6-1009P-201ENST00000390996 NPM3O75607 178 aaKnown RBP15.44■□□□□ 0.06
RNU6-1009P-201ENST00000390996 DNAJC5BQ9UF47 199 aa15.41■□□□□ 0.06
RNU6-1009P-201ENST00000390996 C1QBPQ07021 282 aaKnown RBP15.27■□□□□ 0.04
RNU6-1009P-201ENST00000390996 KCNA4P22459 653 aa15.17■□□□□ 0.02
RNU6-1009P-201ENST00000390996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.13■□□□□ 0.01
RNU6-1009P-201ENST00000390996 U3KPZ7 1027 aaPredicted RBP14.88□□□□□ -0.03
RNU6-1009P-201ENST00000390996 SLC4A2P04920 1241 aa14.77□□□□□ -0.05
RNU6-1009P-201ENST00000390996 SPINK5Q9NQ38 1064 aaPredicted RBP14.65□□□□□ -0.06
RNU6-1009P-201ENST00000390996 CAPN15O75808 1086 aa14.56□□□□□ -0.08
RNU6-1009P-201ENST00000390996 DSG3P32926 999 aa14.54□□□□□ -0.08
RNU6-1009P-201ENST00000390996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.39□□□□□ -0.11
RNU6-1009P-201ENST00000390996 HNRNPUL2Q1KMD3 747 aaKnown RBP14.39□□□□□ -0.11
RNU6-1009P-201ENST00000390996 APLP2Q06481 763 aa14.38□□□□□ -0.11
RNU6-1009P-201ENST00000390996 TRHP20396 242 aaPredicted RBP14.34□□□□□ -0.11
RNU6-1009P-201ENST00000390996 SAMD1Q6SPF0 538 aaPredicted RBP14.33□□□□□ -0.12
RNU6-1009P-201ENST00000390996 ZNF219Q9P2Y4 722 aaPredicted RBP14.33□□□□□ -0.12
RNU6-1009P-201ENST00000390996 SLC4A1APQ9BWU0 796 aaKnown RBP14.28□□□□□ -0.12
RNU6-1009P-201ENST00000390996 MYCNP04198 464 aaPredicted RBP14.26□□□□□ -0.13
RNU6-1009P-201ENST00000390996 ABCB7O75027 752 aa14.25□□□□□ -0.13
RNU6-1009P-201ENST00000390996 FOXD4L1Q9NU39 408 aa14.12□□□□□ -0.15
RNU6-1009P-201ENST00000390996 ZBTB22O15209 634 aa13.99□□□□□ -0.17
RNU6-1009P-201ENST00000390996 POLA2Q14181 598 aa13.98□□□□□ -0.17
RNU6-1009P-201ENST00000390996 ATF5Q9Y2D1 282 aaPredicted RBP13.98□□□□□ -0.17
RNU6-1009P-201ENST00000390996 POTEHQ6S545 545 aa13.87□□□□□ -0.19
RNU6-1009P-201ENST00000390996 RBM42Q9BTD8 480 aaKnown RBP13.82□□□□□ -0.2
RNU6-1009P-201ENST00000390996 ATXN8OSP0DMR3 200 aa13.7□□□□□ -0.22
RNU6-1009P-201ENST00000390996 ZBTB12Q9Y330 459 aaPredicted RBP13.69□□□□□ -0.22
RNU6-1009P-201ENST00000390996 OSCARQ8IYS5 282 aa13.55□□□□□ -0.24
RNU6-1009P-201ENST00000390996 CHRDL2Q6WN34 429 aa13.54□□□□□ -0.24
RNU6-1009P-201ENST00000390996 AKT1S1Q96B36 256 aa13.54□□□□□ -0.24
RNU6-1009P-201ENST00000390996 REM2Q8IYK8 340 aaPredicted RBP13.42□□□□□ -0.26
RNU6-1009P-201ENST00000390996 FBLN2P98095 1184 aa13.34□□□□□ -0.27
RNU6-1009P-201ENST00000390996 MKRN4PQ13434 485 aaPredicted RBP13.34□□□□□ -0.27
RNU6-1009P-201ENST00000390996 CSRNP3Q8WYN3 585 aa13.33□□□□□ -0.28
RNU6-1009P-201ENST00000390996 SPDYE2BA6NHP3 402 aa13.29□□□□□ -0.28
RNU6-1009P-201ENST00000390996 SPDYE6P0CI01 402 aa13.29□□□□□ -0.28
RNU6-1009P-201ENST00000390996 SPDYE2Q495Y8 402 aa13.29□□□□□ -0.28
RNU6-1009P-201ENST00000390996 PITPNM1O00562 1244 aa13.28□□□□□ -0.28
RNU6-1009P-201ENST00000390996 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
RNU6-1009P-201ENST00000390996 FXR2P51116 673 aaKnown RBP eCLIP13.18□□□□□ -0.3
RNU6-1009P-201ENST00000390996 SSUH2Q9Y2M2 353 aa13.15□□□□□ -0.3
RNU6-1009P-201ENST00000390996 EHMT2Q96KQ7 1210 aa13.1□□□□□ -0.31
RNU6-1009P-201ENST00000390996 ZNF692Q9BU19 519 aaPredicted RBP13.1□□□□□ -0.31
RNU6-1009P-201ENST00000390996 SPDYE1Q8NFV5 336 aaPredicted RBP13.04□□□□□ -0.32
RNU6-1009P-201ENST00000390996 SP7Q8TDD2 431 aaPredicted RBP13.01□□□□□ -0.33
RNU6-1009P-201ENST00000390996 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
RNU6-1009P-201ENST00000390996 HAX1O00165 279 aa12.94□□□□□ -0.34
RNU6-1009P-201ENST00000390996 PABPN1Q86U42 306 aaKnown RBP eCLIP12.93□□□□□ -0.34
RNU6-1009P-201ENST00000390996 PRKAR2AP13861 404 aaKnown RBP12.91□□□□□ -0.34
RNU6-1009P-201ENST00000390996 EVX2Q03828 476 aa12.86□□□□□ -0.35
RNU6-1009P-201ENST00000390996 PRR29P0C7W0 189 aa12.78□□□□□ -0.36
RNU6-1009P-201ENST00000390996 CHADLQ6NUI6 762 aa12.77□□□□□ -0.37
RNU6-1009P-201ENST00000390996 C19orf67A6NJJ6 358 aa12.75□□□□□ -0.37
RNU6-1009P-201ENST00000390996 SPDYE4A6NLX3 237 aa12.66□□□□□ -0.38
RNU6-1009P-201ENST00000390996 FARP1Q9Y4F1 1045 aaPredicted RBP12.6□□□□□ -0.39
RNU6-1009P-201ENST00000390996 STAG3Q9UJ98 1225 aa12.55□□□□□ -0.4
RNU6-1009P-201ENST00000390996 GABBR2O75899 941 aa12.53□□□□□ -0.4
RNU6-1009P-201ENST00000390996 CREBZFQ9NS37 354 aa12.53□□□□□ -0.4
RNU6-1009P-201ENST00000390996 CD44P16070 742 aaKnown RBP12.5□□□□□ -0.41
RNU6-1009P-201ENST00000390996 PROM2Q8N271 834 aa12.44□□□□□ -0.42
RNU6-1009P-201ENST00000390996 MNX1P50219 401 aaPredicted RBP12.35□□□□□ -0.43
RNU6-1009P-201ENST00000390996 ZNF579Q8NAF0 562 aaKnown RBP12.34□□□□□ -0.43
RNU6-1009P-201ENST00000390996 POTEIP0CG38 1075 aa12.32□□□□□ -0.44
RNU6-1009P-201ENST00000390996 CLCN6P51797 869 aa12.32□□□□□ -0.44
RNU6-1009P-201ENST00000390996 ZRANB1Q9UGI0 708 aa12.31□□□□□ -0.44
RNU6-1009P-201ENST00000390996 NPM1P06748 294 aaKnown RBP eCLIP12.23□□□□□ -0.45
RNU6-1009P-201ENST00000390996 LHX8Q68G74 356 aa12.19□□□□□ -0.46
RNU6-1009P-201ENST00000390996 GALR2O43603 387 aaPredicted RBP12.18□□□□□ -0.46
RNU6-1009P-201ENST00000390996 PHF12Q96QT6 1004 aa12.18□□□□□ -0.46
RNU6-1009P-201ENST00000390996 PAK3O75914 559 aaPredicted RBP12.17□□□□□ -0.46
RNU6-1009P-201ENST00000390996 DCBLD2Q96PD2 775 aa12.15□□□□□ -0.46
RNU6-1009P-201ENST00000390996 MIER1Q8N108 512 aa12.04□□□□□ -0.48
RNU6-1009P-201ENST00000390996 FKBP8Q14318 412 aa12.03□□□□□ -0.48
RNU6-1009P-201ENST00000390996 TSPYL2Q9H2G4 693 aaPredicted RBP12.02□□□□□ -0.49
RNU6-1009P-201ENST00000390996 CCDC61Q9Y6R9 512 aa12.02□□□□□ -0.49
RNU6-1009P-201ENST00000390996 MS4A3Q96HJ5 214 aa12.01□□□□□ -0.49
RNU6-1009P-201ENST00000390996 PLEKHG5O94827 1062 aa11.98□□□□□ -0.49
RNU6-1009P-201ENST00000390996 RASEFQ8IZ41 740 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms