RNA–Protein interactions for RNA: ENST00000390980.1

RNU6-578P-201, Transcript of RNA, U6 small nuclear 578, pseudogene, humanhuman

BASIC

Gene RNU6-578P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-578P-201ENST00000390980 AEBP2Q6ZN18 517 aaPredicted RBP14.72□□□□□ -0.05
RNU6-578P-201ENST00000390980 CHIC1Q5VXU3 224 aa13.84□□□□□ -0.19
RNU6-578P-201ENST00000390980 SENP3Q9H4L4 574 aaPredicted RBP12.56□□□□□ -0.4
RNU6-578P-201ENST00000390980 PHF23Q9BUL5 403 aaPredicted RBP12.39□□□□□ -0.43
RNU6-578P-201ENST00000390980 FOXD1Q16676 465 aa11.74□□□□□ -0.53
RNU6-578P-201ENST00000390980 MSH5O43196 834 aa11.01□□□□□ -0.65
RNU6-578P-201ENST00000390980 PLPPR3Q6T4P5 718 aa10.99□□□□□ -0.65
RNU6-578P-201ENST00000390980 POTEDQ86YR6 584 aa10.99□□□□□ -0.65
RNU6-578P-201ENST00000390980 PIAS4Q8N2W9 510 aaPredicted RBP10.92□□□□□ -0.66
RNU6-578P-201ENST00000390980 PPP6R1Q9UPN7 881 aa10.88□□□□□ -0.67
RNU6-578P-201ENST00000390980 ADRA2BP18089 450 aa10.84□□□□□ -0.67
RNU6-578P-201ENST00000390980 MAPK8IP2Q13387 824 aaPredicted RBP10.01□□□□□ -0.81
RNU6-578P-201ENST00000390980 DMRT2Q9Y5R5 561 aa9.94□□□□□ -0.82
RNU6-578P-201ENST00000390980 SCAF1Q9H7N4 1312 aaKnown RBP9.9□□□□□ -0.82
RNU6-578P-201ENST00000390980 PPP4R3CPQ6ZMV5 832 aa9.63□□□□□ -0.87
RNU6-578P-201ENST00000390980 DCAF8L1A6NGE4 600 aa9.55□□□□□ -0.88
RNU6-578P-201ENST00000390980 CACNB1Q02641 598 aaPredicted RBP9.54□□□□□ -0.88
RNU6-578P-201ENST00000390980 HOXD11P31277 338 aaPredicted RBP9.52□□□□□ -0.89
RNU6-578P-201ENST00000390980 CNKSR2Q8WXI2 1034 aa9.47□□□□□ -0.89
RNU6-578P-201ENST00000390980 RNF216Q9NWF9 866 aaPredicted RBP9.41□□□□□ -0.9
RNU6-578P-201ENST00000390980 RNF39Q9H2S5 420 aa9.4□□□□□ -0.9
RNU6-578P-201ENST00000390980 C1QBPQ07021 282 aaKnown RBP9.24□□□□□ -0.93
RNU6-578P-201ENST00000390980 NCBP3Q53F19 620 aaKnown RBP9.21□□□□□ -0.94
RNU6-578P-201ENST00000390980 DNAJC5BQ9UF47 199 aa9.21□□□□□ -0.94
RNU6-578P-201ENST00000390980 NPM3O75607 178 aaKnown RBP9.09□□□□□ -0.95
RNU6-578P-201ENST00000390980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.08□□□□□ -0.96
RNU6-578P-201ENST00000390980 U3KPZ7 1027 aaPredicted RBP8.88□□□□□ -0.99
RNU6-578P-201ENST00000390980 KCNA4P22459 653 aa8.81□□□□□ -1
RNU6-578P-201ENST00000390980 SPINK5Q9NQ38 1064 aaPredicted RBP8.8□□□□□ -1
RNU6-578P-201ENST00000390980 CAPN15O75808 1086 aa8.78□□□□□ -1
RNU6-578P-201ENST00000390980 DSG3P32926 999 aa8.76□□□□□ -1.01
RNU6-578P-201ENST00000390980 SLC4A2P04920 1241 aa8.72□□□□□ -1.01
RNU6-578P-201ENST00000390980 TRHP20396 242 aaPredicted RBP8.61□□□□□ -1.03
RNU6-578P-201ENST00000390980 APLP2Q06481 763 aa8.59□□□□□ -1.03
RNU6-578P-201ENST00000390980 POTEHQ6S545 545 aa8.58□□□□□ -1.04
RNU6-578P-201ENST00000390980 ABCB7O75027 752 aa8.57□□□□□ -1.04
RNU6-578P-201ENST00000390980 ZNF219Q9P2Y4 722 aaPredicted RBP8.57□□□□□ -1.04
RNU6-578P-201ENST00000390980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.56□□□□□ -1.04
RNU6-578P-201ENST00000390980 HNRNPUL2Q1KMD3 747 aaKnown RBP8.56□□□□□ -1.04
RNU6-578P-201ENST00000390980 SAMD1Q6SPF0 538 aaPredicted RBP8.51□□□□□ -1.05
RNU6-578P-201ENST00000390980 MYCNP04198 464 aaPredicted RBP8.4□□□□□ -1.06
RNU6-578P-201ENST00000390980 POLA2Q14181 598 aa8.35□□□□□ -1.07
RNU6-578P-201ENST00000390980 RBM42Q9BTD8 480 aaKnown RBP8.34□□□□□ -1.07
RNU6-578P-201ENST00000390980 SLC4A1APQ9BWU0 796 aaKnown RBP8.28□□□□□ -1.08
RNU6-578P-201ENST00000390980 FOXD4L1Q9NU39 408 aa8.24□□□□□ -1.09
RNU6-578P-201ENST00000390980 ATF5Q9Y2D1 282 aaPredicted RBP8.24□□□□□ -1.09
RNU6-578P-201ENST00000390980 CHRDL2Q6WN34 429 aa8.22□□□□□ -1.09
RNU6-578P-201ENST00000390980 ZBTB12Q9Y330 459 aaPredicted RBP8.15□□□□□ -1.1
RNU6-578P-201ENST00000390980 AKT1S1Q96B36 256 aa8.13□□□□□ -1.11
RNU6-578P-201ENST00000390980 ZBTB22O15209 634 aa8.1□□□□□ -1.11
RNU6-578P-201ENST00000390980 OSCARQ8IYS5 282 aa8.08□□□□□ -1.12
RNU6-578P-201ENST00000390980 REM2Q8IYK8 340 aaPredicted RBP8.07□□□□□ -1.12
RNU6-578P-201ENST00000390980 PIP4P2Q8N4L2 257 aa8.01□□□□□ -1.13
RNU6-578P-201ENST00000390980 ATXN8OSP0DMR3 200 aa8□□□□□ -1.13
RNU6-578P-201ENST00000390980 PITPNM1O00562 1244 aa7.98□□□□□ -1.13
RNU6-578P-201ENST00000390980 SP7Q8TDD2 431 aaPredicted RBP7.98□□□□□ -1.13
RNU6-578P-201ENST00000390980 FXR2P51116 673 aaKnown RBP eCLIP7.93□□□□□ -1.14
RNU6-578P-201ENST00000390980 HAX1O00165 279 aa7.9□□□□□ -1.14
RNU6-578P-201ENST00000390980 FBLN2P98095 1184 aa7.9□□□□□ -1.14
RNU6-578P-201ENST00000390980 SPDYE2BA6NHP3 402 aa7.89□□□□□ -1.15
RNU6-578P-201ENST00000390980 SPDYE6P0CI01 402 aa7.89□□□□□ -1.15
RNU6-578P-201ENST00000390980 SPDYE2Q495Y8 402 aa7.89□□□□□ -1.15
RNU6-578P-201ENST00000390980 MKRN4PQ13434 485 aaPredicted RBP7.85□□□□□ -1.15
RNU6-578P-201ENST00000390980 EVX2Q03828 476 aa7.81□□□□□ -1.16
RNU6-578P-201ENST00000390980 CLEC11AQ9Y240 323 aa7.8□□□□□ -1.16
RNU6-578P-201ENST00000390980 SPDYE1Q8NFV5 336 aaPredicted RBP7.79□□□□□ -1.16
RNU6-578P-201ENST00000390980 ZNF692Q9BU19 519 aaPredicted RBP7.79□□□□□ -1.16
RNU6-578P-201ENST00000390980 SSUH2Q9Y2M2 353 aa7.78□□□□□ -1.16
RNU6-578P-201ENST00000390980 PRKAR2AP13861 404 aaKnown RBP7.77□□□□□ -1.17
RNU6-578P-201ENST00000390980 C19orf67A6NJJ6 358 aa7.69□□□□□ -1.18
RNU6-578P-201ENST00000390980 CHADLQ6NUI6 762 aa7.67□□□□□ -1.18
RNU6-578P-201ENST00000390980 PABPN1Q86U42 306 aaKnown RBP eCLIP7.67□□□□□ -1.18
RNU6-578P-201ENST00000390980 PRR29P0C7W0 189 aa7.64□□□□□ -1.19
RNU6-578P-201ENST00000390980 GABBR2O75899 941 aa7.61□□□□□ -1.19
RNU6-578P-201ENST00000390980 CSRNP3Q8WYN3 585 aa7.6□□□□□ -1.19
RNU6-578P-201ENST00000390980 FARP1Q9Y4F1 1045 aaPredicted RBP7.53□□□□□ -1.2
RNU6-578P-201ENST00000390980 CD44P16070 742 aaKnown RBP7.52□□□□□ -1.21
RNU6-578P-201ENST00000390980 LHX8Q68G74 356 aa7.49□□□□□ -1.21
RNU6-578P-201ENST00000390980 POTEIP0CG38 1075 aa7.45□□□□□ -1.22
RNU6-578P-201ENST00000390980 EHMT2Q96KQ7 1210 aa7.44□□□□□ -1.22
RNU6-578P-201ENST00000390980 CREBZFQ9NS37 354 aa7.43□□□□□ -1.22
RNU6-578P-201ENST00000390980 CLCN6P51797 869 aa7.42□□□□□ -1.22
RNU6-578P-201ENST00000390980 STAG3Q9UJ98 1225 aa7.42□□□□□ -1.22
RNU6-578P-201ENST00000390980 SPDYE4A6NLX3 237 aa7.4□□□□□ -1.22
RNU6-578P-201ENST00000390980 ZNF579Q8NAF0 562 aaKnown RBP7.39□□□□□ -1.23
RNU6-578P-201ENST00000390980 ZRANB1Q9UGI0 708 aa7.39□□□□□ -1.23
RNU6-578P-201ENST00000390980 DCBLD2Q96PD2 775 aa7.37□□□□□ -1.23
RNU6-578P-201ENST00000390980 GALR2O43603 387 aaPredicted RBP7.32□□□□□ -1.24
RNU6-578P-201ENST00000390980 PAK3O75914 559 aaPredicted RBP7.29□□□□□ -1.24
RNU6-578P-201ENST00000390980 NPM1P06748 294 aaKnown RBP eCLIP7.28□□□□□ -1.24
RNU6-578P-201ENST00000390980 MNX1P50219 401 aaPredicted RBP7.28□□□□□ -1.24
RNU6-578P-201ENST00000390980 PHF12Q96QT6 1004 aa7.28□□□□□ -1.24
RNU6-578P-201ENST00000390980 POTEB2H3BUK9 544 aa7.21□□□□□ -1.26
RNU6-578P-201ENST00000390980 PELP1Q8IZL8 1130 aaKnown RBP7.2□□□□□ -1.26
RNU6-578P-201ENST00000390980 PROM2Q8N271 834 aa7.2□□□□□ -1.26
RNU6-578P-201ENST00000390980 OTUD5Q96G74 571 aa7.2□□□□□ -1.26
RNU6-578P-201ENST00000390980 MS4A3Q96HJ5 214 aa7.18□□□□□ -1.26
RNU6-578P-201ENST00000390980 TSPYL2Q9H2G4 693 aaPredicted RBP7.16□□□□□ -1.26
RNU6-578P-201ENST00000390980 ASTLQ6HA08 431 aaPredicted RBP7.15□□□□□ -1.26
RNU6-578P-201ENST00000390980 ATMINO43313 823 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms