RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 AEBP2Q6ZN18 517 aaPredicted RBP21.06■□□□□ 0.96
SNORA40.3-201ENST00000390964 CHIC1Q5VXU3 224 aa20.54■□□□□ 0.88
SNORA40.3-201ENST00000390964 PHF23Q9BUL5 403 aaPredicted RBP18.03■□□□□ 0.48
SNORA40.3-201ENST00000390964 SENP3Q9H4L4 574 aaPredicted RBP17.99■□□□□ 0.47
SNORA40.3-201ENST00000390964 FOXD1Q16676 465 aa16.76■□□□□ 0.27
SNORA40.3-201ENST00000390964 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
SNORA40.3-201ENST00000390964 POTEDQ86YR6 584 aa15.97■□□□□ 0.15
SNORA40.3-201ENST00000390964 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
SNORA40.3-201ENST00000390964 ADRA2BP18089 450 aa15.88■□□□□ 0.13
SNORA40.3-201ENST00000390964 MSH5O43196 834 aa15.86■□□□□ 0.13
SNORA40.3-201ENST00000390964 PIAS4Q8N2W9 510 aaPredicted RBP15.64■□□□□ 0.09
SNORA40.3-201ENST00000390964 PPP4R3CPQ6ZMV5 832 aa14.66□□□□□ -0.06
SNORA40.3-201ENST00000390964 SCAF1Q9H7N4 1312 aaKnown RBP14.61□□□□□ -0.07
SNORA40.3-201ENST00000390964 MAPK8IP2Q13387 824 aaPredicted RBP14.43□□□□□ -0.1
SNORA40.3-201ENST00000390964 DMRT2Q9Y5R5 561 aa14.29□□□□□ -0.12
SNORA40.3-201ENST00000390964 NCBP3Q53F19 620 aaKnown RBP14.28□□□□□ -0.12
SNORA40.3-201ENST00000390964 CNKSR2Q8WXI2 1034 aa14.28□□□□□ -0.12
SNORA40.3-201ENST00000390964 KCNA4P22459 653 aa14.22□□□□□ -0.13
SNORA40.3-201ENST00000390964 NPM3O75607 178 aaKnown RBP14.04□□□□□ -0.16
SNORA40.3-201ENST00000390964 RNF216Q9NWF9 866 aaPredicted RBP14.02□□□□□ -0.17
SNORA40.3-201ENST00000390964 HOXD11P31277 338 aaPredicted RBP13.99□□□□□ -0.17
SNORA40.3-201ENST00000390964 CACNB1Q02641 598 aaPredicted RBP13.77□□□□□ -0.21
SNORA40.3-201ENST00000390964 DNAJC5BQ9UF47 199 aa13.73□□□□□ -0.21
SNORA40.3-201ENST00000390964 DCAF8L1A6NGE4 600 aa13.62□□□□□ -0.23
SNORA40.3-201ENST00000390964 SLC4A1APQ9BWU0 796 aaKnown RBP13.54□□□□□ -0.24
SNORA40.3-201ENST00000390964 RNF39Q9H2S5 420 aa13.48□□□□□ -0.25
SNORA40.3-201ENST00000390964 C1QBPQ07021 282 aaKnown RBP13.29□□□□□ -0.28
SNORA40.3-201ENST00000390964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.29□□□□□ -0.28
SNORA40.3-201ENST00000390964 SLC4A2P04920 1241 aa13.27□□□□□ -0.29
SNORA40.3-201ENST00000390964 FOXD4L1Q9NU39 408 aa13.14□□□□□ -0.31
SNORA40.3-201ENST00000390964 ZBTB22O15209 634 aa13.07□□□□□ -0.32
SNORA40.3-201ENST00000390964 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
SNORA40.3-201ENST00000390964 EHMT2Q96KQ7 1210 aa13.03□□□□□ -0.32
SNORA40.3-201ENST00000390964 MYCNP04198 464 aaPredicted RBP12.99□□□□□ -0.33
SNORA40.3-201ENST00000390964 CSRNP3Q8WYN3 585 aa12.96□□□□□ -0.33
SNORA40.3-201ENST00000390964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.94□□□□□ -0.34
SNORA40.3-201ENST00000390964 HNRNPUL2Q1KMD3 747 aaKnown RBP12.94□□□□□ -0.34
SNORA40.3-201ENST00000390964 SAMD1Q6SPF0 538 aaPredicted RBP12.87□□□□□ -0.35
SNORA40.3-201ENST00000390964 APLP2Q06481 763 aa12.82□□□□□ -0.36
SNORA40.3-201ENST00000390964 ATXN8OSP0DMR3 200 aa12.72□□□□□ -0.37
SNORA40.3-201ENST00000390964 SPINK5Q9NQ38 1064 aaPredicted RBP12.7□□□□□ -0.38
SNORA40.3-201ENST00000390964 CAPN15O75808 1086 aa12.66□□□□□ -0.38
SNORA40.3-201ENST00000390964 ZNF219Q9P2Y4 722 aaPredicted RBP12.63□□□□□ -0.39
SNORA40.3-201ENST00000390964 ATF5Q9Y2D1 282 aaPredicted RBP12.6□□□□□ -0.39
SNORA40.3-201ENST00000390964 TRHP20396 242 aaPredicted RBP12.58□□□□□ -0.4
SNORA40.3-201ENST00000390964 DSG3P32926 999 aa12.51□□□□□ -0.41
SNORA40.3-201ENST00000390964 POTEHQ6S545 545 aa12.46□□□□□ -0.41
SNORA40.3-201ENST00000390964 ABCB7O75027 752 aa12.4□□□□□ -0.42
SNORA40.3-201ENST00000390964 POLA2Q14181 598 aa12.39□□□□□ -0.43
SNORA40.3-201ENST00000390964 ZBTB12Q9Y330 459 aaPredicted RBP12.22□□□□□ -0.45
SNORA40.3-201ENST00000390964 FBLN2P98095 1184 aa12.12□□□□□ -0.47
SNORA40.3-201ENST00000390964 MKRN4PQ13434 485 aaPredicted RBP12.06□□□□□ -0.48
SNORA40.3-201ENST00000390964 RBM42Q9BTD8 480 aaKnown RBP11.98□□□□□ -0.49
SNORA40.3-201ENST00000390964 OSCARQ8IYS5 282 aa11.94□□□□□ -0.5
SNORA40.3-201ENST00000390964 SPDYE2BA6NHP3 402 aa11.88□□□□□ -0.51
SNORA40.3-201ENST00000390964 SPDYE6P0CI01 402 aa11.88□□□□□ -0.51
SNORA40.3-201ENST00000390964 SPDYE2Q495Y8 402 aa11.88□□□□□ -0.51
SNORA40.3-201ENST00000390964 CHRDL2Q6WN34 429 aa11.81□□□□□ -0.52
SNORA40.3-201ENST00000390964 ZNF692Q9BU19 519 aaPredicted RBP11.79□□□□□ -0.52
SNORA40.3-201ENST00000390964 SPDYE4A6NLX3 237 aa11.78□□□□□ -0.52
SNORA40.3-201ENST00000390964 AKT1S1Q96B36 256 aa11.77□□□□□ -0.53
SNORA40.3-201ENST00000390964 SSUH2Q9Y2M2 353 aa11.77□□□□□ -0.53
SNORA40.3-201ENST00000390964 FKBP8Q14318 412 aa11.71□□□□□ -0.53
SNORA40.3-201ENST00000390964 PABPN1Q86U42 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
SNORA40.3-201ENST00000390964 REM2Q8IYK8 340 aaPredicted RBP11.62□□□□□ -0.55
SNORA40.3-201ENST00000390964 PROM2Q8N271 834 aa11.61□□□□□ -0.55
SNORA40.3-201ENST00000390964 SP7Q8TDD2 431 aaPredicted RBP11.54□□□□□ -0.56
SNORA40.3-201ENST00000390964 SPDYE1Q8NFV5 336 aaPredicted RBP11.53□□□□□ -0.56
SNORA40.3-201ENST00000390964 PITPNM1O00562 1244 aa11.48□□□□□ -0.57
SNORA40.3-201ENST00000390964 STAG3Q9UJ98 1225 aa11.47□□□□□ -0.57
SNORA40.3-201ENST00000390964 PIP4P2Q8N4L2 257 aa11.46□□□□□ -0.57
SNORA40.3-201ENST00000390964 CLEC11AQ9Y240 323 aa11.45□□□□□ -0.58
SNORA40.3-201ENST00000390964 FBXO3Q9UK99 471 aa11.37□□□□□ -0.59
SNORA40.3-201ENST00000390964 PRR29P0C7W0 189 aa11.36□□□□□ -0.59
SNORA40.3-201ENST00000390964 FXR2P51116 673 aaKnown RBP eCLIP11.35□□□□□ -0.59
SNORA40.3-201ENST00000390964 HAX1O00165 279 aa11.33□□□□□ -0.6
SNORA40.3-201ENST00000390964 PRKAR2AP13861 404 aaKnown RBP11.2□□□□□ -0.62
SNORA40.3-201ENST00000390964 CREBZFQ9NS37 354 aa11.19□□□□□ -0.62
SNORA40.3-201ENST00000390964 VASPP50552 380 aaPredicted RBP11.18□□□□□ -0.62
SNORA40.3-201ENST00000390964 MIER1Q8N108 512 aa11.17□□□□□ -0.62
SNORA40.3-201ENST00000390964 CHADLQ6NUI6 762 aa11.16□□□□□ -0.62
SNORA40.3-201ENST00000390964 PLEKHG5O94827 1062 aa11.15□□□□□ -0.62
SNORA40.3-201ENST00000390964 PLCD3Q8N3E9 789 aa11.15□□□□□ -0.62
SNORA40.3-201ENST00000390964 EVX2Q03828 476 aa11.13□□□□□ -0.63
SNORA40.3-201ENST00000390964 MNX1P50219 401 aaPredicted RBP11.08□□□□□ -0.64
SNORA40.3-201ENST00000390964 ZBTB47Q9UFB7 747 aaPredicted RBP11.08□□□□□ -0.64
SNORA40.3-201ENST00000390964 FARP1Q9Y4F1 1045 aaPredicted RBP11.08□□□□□ -0.64
SNORA40.3-201ENST00000390964 NPM1P06748 294 aaKnown RBP eCLIP11.03□□□□□ -0.64
SNORA40.3-201ENST00000390964 IFNLR1Q8IU57 520 aaPredicted RBP11.02□□□□□ -0.65
SNORA40.3-201ENST00000390964 C19orf67A6NJJ6 358 aa10.99□□□□□ -0.65
SNORA40.3-201ENST00000390964 KLHL34Q8N239 644 aa10.99□□□□□ -0.65
SNORA40.3-201ENST00000390964 SPOCK2Q92563 424 aa10.91□□□□□ -0.66
SNORA40.3-201ENST00000390964 GABBR2O75899 941 aa10.9□□□□□ -0.66
SNORA40.3-201ENST00000390964 NUBP1P53384 320 aa10.9□□□□□ -0.66
SNORA40.3-201ENST00000390964 CD44P16070 742 aaKnown RBP10.87□□□□□ -0.67
SNORA40.3-201ENST00000390964 PAK3O75914 559 aaPredicted RBP10.85□□□□□ -0.67
SNORA40.3-201ENST00000390964 RASEFQ8IZ41 740 aa10.85□□□□□ -0.67
SNORA40.3-201ENST00000390964 FAM212AQ96EL1 285 aa10.82□□□□□ -0.68
SNORA40.3-201ENST00000390964 LHX8Q68G74 356 aa10.81□□□□□ -0.68
SNORA40.3-201ENST00000390964 TSPYL2Q9H2G4 693 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms