RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 AEBP2Q6ZN18 517 aaPredicted RBP21.58■■□□□ 1.05
SNORA40.2-201ENST00000390847 CHIC1Q5VXU3 224 aa21.3■■□□□ 1
SNORA40.2-201ENST00000390847 PHF23Q9BUL5 403 aaPredicted RBP18.73■□□□□ 0.59
SNORA40.2-201ENST00000390847 SENP3Q9H4L4 574 aaPredicted RBP18.32■□□□□ 0.52
SNORA40.2-201ENST00000390847 PLPPR3Q6T4P5 718 aa17.42■□□□□ 0.38
SNORA40.2-201ENST00000390847 FOXD1Q16676 465 aa16.96■□□□□ 0.31
SNORA40.2-201ENST00000390847 ADRA2BP18089 450 aa16.51■□□□□ 0.23
SNORA40.2-201ENST00000390847 PPP6R1Q9UPN7 881 aa16.48■□□□□ 0.23
SNORA40.2-201ENST00000390847 PIAS4Q8N2W9 510 aaPredicted RBP16.1■□□□□ 0.17
SNORA40.2-201ENST00000390847 MSH5O43196 834 aa15.58■□□□□ 0.08
SNORA40.2-201ENST00000390847 PPP4R3CPQ6ZMV5 832 aa15.37■□□□□ 0.05
SNORA40.2-201ENST00000390847 KCNA4P22459 653 aa15.26■□□□□ 0.03
SNORA40.2-201ENST00000390847 SCAF1Q9H7N4 1312 aaKnown RBP15.13■□□□□ 0.01
SNORA40.2-201ENST00000390847 NCBP3Q53F19 620 aaKnown RBP15.06■□□□□ 0
SNORA40.2-201ENST00000390847 MAPK8IP2Q13387 824 aaPredicted RBP14.91□□□□□ -0.02
SNORA40.2-201ENST00000390847 CNKSR2Q8WXI2 1034 aa14.89□□□□□ -0.03
SNORA40.2-201ENST00000390847 NPM3O75607 178 aaKnown RBP14.8□□□□□ -0.04
SNORA40.2-201ENST00000390847 DMRT2Q9Y5R5 561 aa14.64□□□□□ -0.07
SNORA40.2-201ENST00000390847 SLC4A1APQ9BWU0 796 aaKnown RBP14.6□□□□□ -0.07
SNORA40.2-201ENST00000390847 RNF216Q9NWF9 866 aaPredicted RBP14.54□□□□□ -0.08
SNORA40.2-201ENST00000390847 EHMT2Q96KQ7 1210 aa14.47□□□□□ -0.09
SNORA40.2-201ENST00000390847 HOXD11P31277 338 aaPredicted RBP14.4□□□□□ -0.1
SNORA40.2-201ENST00000390847 DNAJC5BQ9UF47 199 aa14.25□□□□□ -0.13
SNORA40.2-201ENST00000390847 CSRNP3Q8WYN3 585 aa14.12□□□□□ -0.15
SNORA40.2-201ENST00000390847 DCAF8L1A6NGE4 600 aa14.11□□□□□ -0.15
SNORA40.2-201ENST00000390847 ZBTB22O15209 634 aa14.02□□□□□ -0.17
SNORA40.2-201ENST00000390847 FOXD4L1Q9NU39 408 aa13.98□□□□□ -0.17
SNORA40.2-201ENST00000390847 SLC4A2P04920 1241 aa13.9□□□□□ -0.18
SNORA40.2-201ENST00000390847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.81□□□□□ -0.2
SNORA40.2-201ENST00000390847 POTEDQ86YR6 584 aa13.8□□□□□ -0.2
SNORA40.2-201ENST00000390847 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
SNORA40.2-201ENST00000390847 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
SNORA40.2-201ENST00000390847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.49□□□□□ -0.25
SNORA40.2-201ENST00000390847 HNRNPUL2Q1KMD3 747 aaKnown RBP13.49□□□□□ -0.25
SNORA40.2-201ENST00000390847 ATXN8OSP0DMR3 200 aa13.46□□□□□ -0.25
SNORA40.2-201ENST00000390847 SAMD1Q6SPF0 538 aaPredicted RBP13.45□□□□□ -0.26
SNORA40.2-201ENST00000390847 RNF39Q9H2S5 420 aa13.35□□□□□ -0.27
SNORA40.2-201ENST00000390847 APLP2Q06481 763 aa13.31□□□□□ -0.28
SNORA40.2-201ENST00000390847 ATF5Q9Y2D1 282 aaPredicted RBP13.29□□□□□ -0.28
SNORA40.2-201ENST00000390847 C1QBPQ07021 282 aaKnown RBP13.21□□□□□ -0.29
SNORA40.2-201ENST00000390847 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
SNORA40.2-201ENST00000390847 CAPN15O75808 1086 aa13.11□□□□□ -0.31
SNORA40.2-201ENST00000390847 TRHP20396 242 aaPredicted RBP13.1□□□□□ -0.31
SNORA40.2-201ENST00000390847 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
SNORA40.2-201ENST00000390847 POLA2Q14181 598 aa12.91□□□□□ -0.34
SNORA40.2-201ENST00000390847 CACNB1Q02641 598 aaPredicted RBP12.9□□□□□ -0.34
SNORA40.2-201ENST00000390847 ABCB7O75027 752 aa12.88□□□□□ -0.35
SNORA40.2-201ENST00000390847 FKBP8Q14318 412 aa12.81□□□□□ -0.36
SNORA40.2-201ENST00000390847 FBLN2P98095 1184 aa12.78□□□□□ -0.36
SNORA40.2-201ENST00000390847 DSG3P32926 999 aa12.77□□□□□ -0.37
SNORA40.2-201ENST00000390847 ZBTB12Q9Y330 459 aaPredicted RBP12.72□□□□□ -0.37
SNORA40.2-201ENST00000390847 MKRN4PQ13434 485 aaPredicted RBP12.71□□□□□ -0.37
SNORA40.2-201ENST00000390847 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
SNORA40.2-201ENST00000390847 OSCARQ8IYS5 282 aa12.47□□□□□ -0.41
SNORA40.2-201ENST00000390847 ZNF692Q9BU19 519 aaPredicted RBP12.38□□□□□ -0.43
SNORA40.2-201ENST00000390847 SPDYE2BA6NHP3 402 aa12.36□□□□□ -0.43
SNORA40.2-201ENST00000390847 SPDYE6P0CI01 402 aa12.36□□□□□ -0.43
SNORA40.2-201ENST00000390847 SPDYE2Q495Y8 402 aa12.36□□□□□ -0.43
SNORA40.2-201ENST00000390847 PROM2Q8N271 834 aa12.31□□□□□ -0.44
SNORA40.2-201ENST00000390847 FBXO3Q9UK99 471 aa12.29□□□□□ -0.44
SNORA40.2-201ENST00000390847 SSUH2Q9Y2M2 353 aa12.27□□□□□ -0.45
SNORA40.2-201ENST00000390847 PABPN1Q86U42 306 aaKnown RBP eCLIP12.23□□□□□ -0.45
SNORA40.2-201ENST00000390847 RBM42Q9BTD8 480 aaKnown RBP12.2□□□□□ -0.46
SNORA40.2-201ENST00000390847 VASPP50552 380 aaPredicted RBP12.1□□□□□ -0.47
SNORA40.2-201ENST00000390847 AKT1S1Q96B36 256 aa12.07□□□□□ -0.48
SNORA40.2-201ENST00000390847 STAG3Q9UJ98 1225 aa12.05□□□□□ -0.48
SNORA40.2-201ENST00000390847 AMER1Q5JTC6 1135 aaPredicted RBP12.03□□□□□ -0.48
SNORA40.2-201ENST00000390847 RTN4Q9NQC3 1192 aaKnown RBP12□□□□□ -0.49
SNORA40.2-201ENST00000390847 REM2Q8IYK8 340 aaPredicted RBP11.97□□□□□ -0.49
SNORA40.2-201ENST00000390847 SPDYE1Q8NFV5 336 aaPredicted RBP11.97□□□□□ -0.49
SNORA40.2-201ENST00000390847 PLCD3Q8N3E9 789 aa11.95□□□□□ -0.5
SNORA40.2-201ENST00000390847 CLEC11AQ9Y240 323 aa11.95□□□□□ -0.5
SNORA40.2-201ENST00000390847 MIER1Q8N108 512 aa11.94□□□□□ -0.5
SNORA40.2-201ENST00000390847 IFNLR1Q8IU57 520 aaPredicted RBP11.93□□□□□ -0.5
SNORA40.2-201ENST00000390847 KLHL34Q8N239 644 aa11.91□□□□□ -0.5
SNORA40.2-201ENST00000390847 PLEKHG5O94827 1062 aa11.88□□□□□ -0.51
SNORA40.2-201ENST00000390847 PRR29P0C7W0 189 aa11.85□□□□□ -0.51
SNORA40.2-201ENST00000390847 PITPNM1O00562 1244 aa11.83□□□□□ -0.52
SNORA40.2-201ENST00000390847 SPOCK2Q92563 424 aa11.79□□□□□ -0.52
SNORA40.2-201ENST00000390847 ZBTB47Q9UFB7 747 aaPredicted RBP11.78□□□□□ -0.52
SNORA40.2-201ENST00000390847 CREBZFQ9NS37 354 aa11.7□□□□□ -0.54
SNORA40.2-201ENST00000390847 PKD2Q13563 968 aa11.61□□□□□ -0.55
SNORA40.2-201ENST00000390847 CHRDL2Q6WN34 429 aa11.61□□□□□ -0.55
SNORA40.2-201ENST00000390847 CIZ1Q9ULV3 898 aaPredicted RBP11.61□□□□□ -0.55
SNORA40.2-201ENST00000390847 CHADLQ6NUI6 762 aa11.6□□□□□ -0.55
SNORA40.2-201ENST00000390847 MNX1P50219 401 aaPredicted RBP11.58□□□□□ -0.56
SNORA40.2-201ENST00000390847 PRKAR2AP13861 404 aaKnown RBP11.56□□□□□ -0.56
SNORA40.2-201ENST00000390847 ECM2O94769 699 aaPredicted RBP11.55□□□□□ -0.56
SNORA40.2-201ENST00000390847 NPM1P06748 294 aaKnown RBP eCLIP11.55□□□□□ -0.56
SNORA40.2-201ENST00000390847 DCAF8L2P0C7V8 631 aa11.55□□□□□ -0.56
SNORA40.2-201ENST00000390847 NUBP1P53384 320 aa11.54□□□□□ -0.56
SNORA40.2-201ENST00000390847 FXR2P51116 673 aaKnown RBP eCLIP11.53□□□□□ -0.56
SNORA40.2-201ENST00000390847 DCAF8Q5TAQ9 597 aa11.52□□□□□ -0.57
SNORA40.2-201ENST00000390847 GSE1Q14687 1217 aa11.51□□□□□ -0.57
SNORA40.2-201ENST00000390847 PIP4P2Q8N4L2 257 aa11.5□□□□□ -0.57
SNORA40.2-201ENST00000390847 FAM212AQ96EL1 285 aa11.5□□□□□ -0.57
SNORA40.2-201ENST00000390847 FARP1Q9Y4F1 1045 aaPredicted RBP11.5□□□□□ -0.57
SNORA40.2-201ENST00000390847 RASEFQ8IZ41 740 aa11.47□□□□□ -0.57
SNORA40.2-201ENST00000390847 TRIM41Q8WV44 630 aa11.44□□□□□ -0.58
SNORA40.2-201ENST00000390847 RGL2O15211 777 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 260 ms