RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 AEBP2Q6ZN18 517 aaPredicted RBP15.56■□□□□ 0.08
SNORA40.19-201ENST00000390846 CHIC1Q5VXU3 224 aa14.6□□□□□ -0.07
SNORA40.19-201ENST00000390846 SENP3Q9H4L4 574 aaPredicted RBP12.99□□□□□ -0.33
SNORA40.19-201ENST00000390846 PHF23Q9BUL5 403 aaPredicted RBP12.96□□□□□ -0.33
SNORA40.19-201ENST00000390846 FOXD1Q16676 465 aa12.29□□□□□ -0.44
SNORA40.19-201ENST00000390846 PPP6R1Q9UPN7 881 aa11.57□□□□□ -0.56
SNORA40.19-201ENST00000390846 PLPPR3Q6T4P5 718 aa11.53□□□□□ -0.56
SNORA40.19-201ENST00000390846 ADRA2BP18089 450 aa11.43□□□□□ -0.58
SNORA40.19-201ENST00000390846 PIAS4Q8N2W9 510 aaPredicted RBP11.31□□□□□ -0.6
SNORA40.19-201ENST00000390846 MSH5O43196 834 aa11.29□□□□□ -0.6
SNORA40.19-201ENST00000390846 POTEDQ86YR6 584 aa11.23□□□□□ -0.61
SNORA40.19-201ENST00000390846 MAPK8IP2Q13387 824 aaPredicted RBP10.56□□□□□ -0.72
SNORA40.19-201ENST00000390846 DMRT2Q9Y5R5 561 aa10.4□□□□□ -0.74
SNORA40.19-201ENST00000390846 SCAF1Q9H7N4 1312 aaKnown RBP10.18□□□□□ -0.78
SNORA40.19-201ENST00000390846 PPP4R3CPQ6ZMV5 832 aa10.18□□□□□ -0.78
SNORA40.19-201ENST00000390846 HOXD11P31277 338 aaPredicted RBP10.05□□□□□ -0.8
SNORA40.19-201ENST00000390846 CNKSR2Q8WXI2 1034 aa9.94□□□□□ -0.82
SNORA40.19-201ENST00000390846 RNF216Q9NWF9 866 aaPredicted RBP9.89□□□□□ -0.83
SNORA40.19-201ENST00000390846 RNF39Q9H2S5 420 aa9.79□□□□□ -0.84
SNORA40.19-201ENST00000390846 DCAF8L1A6NGE4 600 aa9.74□□□□□ -0.85
SNORA40.19-201ENST00000390846 NPM3O75607 178 aaKnown RBP9.69□□□□□ -0.86
SNORA40.19-201ENST00000390846 CACNB1Q02641 598 aaPredicted RBP9.68□□□□□ -0.86
SNORA40.19-201ENST00000390846 DNAJC5BQ9UF47 199 aa9.66□□□□□ -0.86
SNORA40.19-201ENST00000390846 NCBP3Q53F19 620 aaKnown RBP9.59□□□□□ -0.87
SNORA40.19-201ENST00000390846 C1QBPQ07021 282 aaKnown RBP9.53□□□□□ -0.88
SNORA40.19-201ENST00000390846 KCNA4P22459 653 aa9.51□□□□□ -0.89
SNORA40.19-201ENST00000390846 U3KPZ7 1027 aaPredicted RBP9.37□□□□□ -0.91
SNORA40.19-201ENST00000390846 SLC4A2P04920 1241 aa9.36□□□□□ -0.91
SNORA40.19-201ENST00000390846 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.35□□□□□ -0.91
SNORA40.19-201ENST00000390846 SPINK5Q9NQ38 1064 aaPredicted RBP9.24□□□□□ -0.93
SNORA40.19-201ENST00000390846 DSG3P32926 999 aa9.17□□□□□ -0.94
SNORA40.19-201ENST00000390846 CAPN15O75808 1086 aa9.02□□□□□ -0.97
SNORA40.19-201ENST00000390846 ABCB7O75027 752 aa8.9□□□□□ -0.98
SNORA40.19-201ENST00000390846 TRHP20396 242 aaPredicted RBP8.9□□□□□ -0.98
SNORA40.19-201ENST00000390846 ZBTB22O15209 634 aa8.87□□□□□ -0.99
SNORA40.19-201ENST00000390846 ATF5Q9Y2D1 282 aaPredicted RBP8.87□□□□□ -0.99
SNORA40.19-201ENST00000390846 ZNF219Q9P2Y4 722 aaPredicted RBP8.84□□□□□ -0.99
SNORA40.19-201ENST00000390846 MYCNP04198 464 aaPredicted RBP8.83□□□□□ -1
SNORA40.19-201ENST00000390846 SAMD1Q6SPF0 538 aaPredicted RBP8.83□□□□□ -1
SNORA40.19-201ENST00000390846 SLC4A1APQ9BWU0 796 aaKnown RBP8.83□□□□□ -1
SNORA40.19-201ENST00000390846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.81□□□□□ -1
SNORA40.19-201ENST00000390846 HNRNPUL2Q1KMD3 747 aaKnown RBP8.81□□□□□ -1
SNORA40.19-201ENST00000390846 FOXD4L1Q9NU39 408 aa8.76□□□□□ -1.01
SNORA40.19-201ENST00000390846 APLP2Q06481 763 aa8.74□□□□□ -1.01
SNORA40.19-201ENST00000390846 POLA2Q14181 598 aa8.73□□□□□ -1.01
SNORA40.19-201ENST00000390846 POTEHQ6S545 545 aa8.72□□□□□ -1.01
SNORA40.19-201ENST00000390846 RBM42Q9BTD8 480 aaKnown RBP8.51□□□□□ -1.05
SNORA40.19-201ENST00000390846 ATXN8OSP0DMR3 200 aa8.49□□□□□ -1.05
SNORA40.19-201ENST00000390846 CHRDL2Q6WN34 429 aa8.46□□□□□ -1.06
SNORA40.19-201ENST00000390846 OSCARQ8IYS5 282 aa8.46□□□□□ -1.06
SNORA40.19-201ENST00000390846 MKRN4PQ13434 485 aaPredicted RBP8.45□□□□□ -1.06
SNORA40.19-201ENST00000390846 REM2Q8IYK8 340 aaPredicted RBP8.41□□□□□ -1.06
SNORA40.19-201ENST00000390846 AKT1S1Q96B36 256 aa8.41□□□□□ -1.06
SNORA40.19-201ENST00000390846 ZBTB12Q9Y330 459 aaPredicted RBP8.38□□□□□ -1.07
SNORA40.19-201ENST00000390846 CSRNP3Q8WYN3 585 aa8.37□□□□□ -1.07
SNORA40.19-201ENST00000390846 PITPNM1O00562 1244 aa8.33□□□□□ -1.08
SNORA40.19-201ENST00000390846 PIP4P2Q8N4L2 257 aa8.33□□□□□ -1.08
SNORA40.19-201ENST00000390846 FXR2P51116 673 aaKnown RBP eCLIP8.3□□□□□ -1.08
SNORA40.19-201ENST00000390846 SSUH2Q9Y2M2 353 aa8.25□□□□□ -1.09
SNORA40.19-201ENST00000390846 SPDYE2BA6NHP3 402 aa8.23□□□□□ -1.09
SNORA40.19-201ENST00000390846 SPDYE6P0CI01 402 aa8.23□□□□□ -1.09
SNORA40.19-201ENST00000390846 EVX2Q03828 476 aa8.23□□□□□ -1.09
SNORA40.19-201ENST00000390846 SPDYE2Q495Y8 402 aa8.23□□□□□ -1.09
SNORA40.19-201ENST00000390846 FBLN2P98095 1184 aa8.16□□□□□ -1.1
SNORA40.19-201ENST00000390846 SP7Q8TDD2 431 aaPredicted RBP8.16□□□□□ -1.1
SNORA40.19-201ENST00000390846 ZNF692Q9BU19 519 aaPredicted RBP8.11□□□□□ -1.11
SNORA40.19-201ENST00000390846 EHMT2Q96KQ7 1210 aa8.06□□□□□ -1.12
SNORA40.19-201ENST00000390846 PRKAR2AP13861 404 aaKnown RBP8.04□□□□□ -1.12
SNORA40.19-201ENST00000390846 SPDYE1Q8NFV5 336 aaPredicted RBP8.04□□□□□ -1.12
SNORA40.19-201ENST00000390846 C19orf67A6NJJ6 358 aa8.03□□□□□ -1.12
SNORA40.19-201ENST00000390846 PABPN1Q86U42 306 aaKnown RBP eCLIP8.03□□□□□ -1.12
SNORA40.19-201ENST00000390846 HAX1O00165 279 aa8.02□□□□□ -1.13
SNORA40.19-201ENST00000390846 CHADLQ6NUI6 762 aa8.01□□□□□ -1.13
SNORA40.19-201ENST00000390846 CLEC11AQ9Y240 323 aa8□□□□□ -1.13
SNORA40.19-201ENST00000390846 GABBR2O75899 941 aa7.89□□□□□ -1.15
SNORA40.19-201ENST00000390846 PRR29P0C7W0 189 aa7.89□□□□□ -1.15
SNORA40.19-201ENST00000390846 CREBZFQ9NS37 354 aa7.88□□□□□ -1.15
SNORA40.19-201ENST00000390846 POTEIP0CG38 1075 aa7.87□□□□□ -1.15
SNORA40.19-201ENST00000390846 PROM2Q8N271 834 aa7.85□□□□□ -1.15
SNORA40.19-201ENST00000390846 FARP1Q9Y4F1 1045 aaPredicted RBP7.85□□□□□ -1.15
SNORA40.19-201ENST00000390846 MNX1P50219 401 aaPredicted RBP7.84□□□□□ -1.15
SNORA40.19-201ENST00000390846 SPDYE4A6NLX3 237 aa7.83□□□□□ -1.16
SNORA40.19-201ENST00000390846 CD44P16070 742 aaKnown RBP7.76□□□□□ -1.17
SNORA40.19-201ENST00000390846 ZNF579Q8NAF0 562 aaKnown RBP7.71□□□□□ -1.18
SNORA40.19-201ENST00000390846 STAG3Q9UJ98 1225 aa7.68□□□□□ -1.18
SNORA40.19-201ENST00000390846 GALR2O43603 387 aaPredicted RBP7.66□□□□□ -1.18
SNORA40.19-201ENST00000390846 ZRANB1Q9UGI0 708 aa7.64□□□□□ -1.19
SNORA40.19-201ENST00000390846 LHX8Q68G74 356 aa7.63□□□□□ -1.19
SNORA40.19-201ENST00000390846 PHF12Q96QT6 1004 aa7.62□□□□□ -1.19
SNORA40.19-201ENST00000390846 POTEB2H3BUK9 544 aa7.61□□□□□ -1.19
SNORA40.19-201ENST00000390846 PELP1Q8IZL8 1130 aaKnown RBP7.61□□□□□ -1.19
SNORA40.19-201ENST00000390846 CLCN6P51797 869 aa7.57□□□□□ -1.2
SNORA40.19-201ENST00000390846 CCDC61Q9Y6R9 512 aa7.55□□□□□ -1.2
SNORA40.19-201ENST00000390846 POTEJP0CG39 1038 aa7.54□□□□□ -1.2
SNORA40.19-201ENST00000390846 MS4A3Q96HJ5 214 aa7.52□□□□□ -1.21
SNORA40.19-201ENST00000390846 RASEFQ8IZ41 740 aa7.5□□□□□ -1.21
SNORA40.19-201ENST00000390846 OTUD5Q96G74 571 aa7.5□□□□□ -1.21
SNORA40.19-201ENST00000390846 TRPC6Q9Y210 931 aa7.5□□□□□ -1.21
SNORA40.19-201ENST00000390846 ASTLQ6HA08 431 aaPredicted RBP7.49□□□□□ -1.21
SNORA40.19-201ENST00000390846 POTEFA5A3E0 1075 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms