RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 RYR1P21817 5038 aa0.16□□□□□ -2.38
TRAJ54-201ENST00000390484 MDN1Q9NU22 5596 aa0.15□□□□□ -2.39
TRAJ54-201ENST00000390484 PCLOQ9Y6V0 5065 aa0.14□□□□□ -2.39
TRAJ54-201ENST00000390484 FCGBPQ9Y6R7 5405 aaPredicted RBP0.14□□□□□ -2.39
TRAJ54-201ENST00000390484 KMT2DO14686 5537 aa0.14□□□□□ -2.39
TRAJ54-201ENST00000390484 UBR4Q5T4S7 5183 aa0.13□□□□□ -2.39
TRAJ54-201ENST00000390484 HYDINQ4G0P3 5121 aa0.13□□□□□ -2.39
TRAJ54-201ENST00000390484 KMT2CQ8NEZ4 4911 aaKnown RBP0.13□□□□□ -2.39
TRAJ54-201ENST00000390484 RYR2Q92736 4967 aa0.13□□□□□ -2.39
TRAJ54-201ENST00000390484 HMCN1Q96RW7 5635 aa0.12□□□□□ -2.39
TRAJ54-201ENST00000390484 MUC12Q9UKN1 5478 aa0.12□□□□□ -2.39
TRAJ54-201ENST00000390484 MUC5ACP98088 5654 aa0.12□□□□□ -2.39
TRAJ54-201ENST00000390484 MUC5BQ9HC84 5762 aaPredicted RBP0.11□□□□□ -2.39
TRAJ54-201ENST00000390484 ABCA13Q86UQ4 5058 aa0.11□□□□□ -2.39
TRAJ54-201ENST00000390484 DNHD1Q96M86 4753 aa0.11□□□□□ -2.39
TRAJ54-201ENST00000390484 FAT4Q6V0I7 4981 aa0.11□□□□□ -2.39
TRAJ54-201ENST00000390484 SSPOA2VEC9 5147 aa0.11□□□□□ -2.39
TRAJ54-201ENST00000390484 AHNAK2Q8IVF2 5795 aa0.11□□□□□ -2.39
TRAJ54-201ENST00000390484 EPPK1P58107 5090 aaKnown RBP0.11□□□□□ -2.39
TRAJ54-201ENST00000390484 RNF213Q63HN8 5207 aa0.1□□□□□ -2.39
TRAJ54-201ENST00000390484 RYR3Q15413 4870 aa0.1□□□□□ -2.39
TRAJ54-201ENST00000390484 LRP2P98164 4655 aa0.1□□□□□ -2.39
TRAJ54-201ENST00000390484 MUC2Q02817 5179 aa0.1□□□□□ -2.39
TRAJ54-201ENST00000390484 HMCN2Q8NDA2 5059 aa0.1□□□□□ -2.39
TRAJ54-201ENST00000390484 GPR98Q8WXG9 6306 aa0.1□□□□□ -2.39
TRAJ54-201ENST00000390484 KIAA1109Q2LD37 5005 aa0.1□□□□□ -2.39
TRAJ54-201ENST00000390484 BIRC6Q9NR09 4857 aa0.09□□□□□ -2.39
TRAJ54-201ENST00000390484 HERC2O95714 4834 aa0.09□□□□□ -2.39
TRAJ54-201ENST00000390484 HERC1Q15751 4861 aa0.09□□□□□ -2.4
TRAJ54-201ENST00000390484 AHNAKQ09666 5890 aaKnown RBP0.09□□□□□ -2.4
TRAJ54-201ENST00000390484 STARD9Q9P2P6 4700 aa0.09□□□□□ -2.4
TRAJ54-201ENST00000390484 USH2AO75445 5202 aa0.09□□□□□ -2.4
TRAJ54-201ENST00000390484 AEBP2Q6ZN18 517 aaPredicted RBP0.08□□□□□ -2.4
TRAJ54-201ENST00000390484 POTEDQ86YR6 584 aa0.08□□□□□ -2.4
TRAJ54-201ENST00000390484 SYNE1Q8NF91 8797 aaKnown RBP0.08□□□□□ -2.4
TRAJ54-201ENST00000390484 DNAH5Q8TE73 4624 aa0.07□□□□□ -2.4
TRAJ54-201ENST00000390484 SACSQ9NZJ4 4579 aa0.07□□□□□ -2.4
TRAJ54-201ENST00000390484 SYNE2Q8WXH0 6885 aaKnown RBP0.07□□□□□ -2.4
TRAJ54-201ENST00000390484 DYNC1H1Q14204 4646 aaKnown RBP0.07□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP17-1Q9BYP8 105 aa0.07□□□□□ -2.4
TRAJ54-201ENST00000390484 FSIP2Q5CZC0 6907 aa0.07□□□□□ -2.4
TRAJ54-201ENST00000390484 FAT1Q14517 4588 aa0.07□□□□□ -2.4
TRAJ54-201ENST00000390484 MUC16Q8WXI7 14507 aa0.07□□□□□ -2.4
TRAJ54-201ENST00000390484 NEBP20929 6669 aa0.07□□□□□ -2.4
TRAJ54-201ENST00000390484 MYCBP2O75592 4640 aa0.07□□□□□ -2.4
TRAJ54-201ENST00000390484 PLECQ15149 4684 aaKnown RBP0.07□□□□□ -2.4
TRAJ54-201ENST00000390484 LRP1Q07954 4544 aaKnown RBP0.06□□□□□ -2.4
TRAJ54-201ENST00000390484 HUWE1Q7Z6Z7 4374 aaKnown RBP0.06□□□□□ -2.4
TRAJ54-201ENST00000390484 LRP1BQ9NZR2 4599 aa0.06□□□□□ -2.4
TRAJ54-201ENST00000390484 DNAH7Q8WXX0 4024 aa0.06□□□□□ -2.4
TRAJ54-201ENST00000390484 POTEIP0CG38 1075 aa0.06□□□□□ -2.4
TRAJ54-201ENST00000390484 EVX2Q03828 476 aa0.06□□□□□ -2.4
TRAJ54-201ENST00000390484 FOXD1Q16676 465 aa0.06□□□□□ -2.4
TRAJ54-201ENST00000390484 LCE2DQ5TA82 110 aaPredicted RBP0.06□□□□□ -2.4
TRAJ54-201ENST00000390484 PHF23Q9BUL5 403 aaPredicted RBP0.06□□□□□ -2.4
TRAJ54-201ENST00000390484 PPP6R1Q9UPN7 881 aa0.06□□□□□ -2.4
TRAJ54-201ENST00000390484 FAT3Q8TDW7 4589 aa0.06□□□□□ -2.4
TRAJ54-201ENST00000390484 DNAH17Q9UFH2 4485 aa0.06□□□□□ -2.4
TRAJ54-201ENST00000390484 LPAP08519 4548 aa0.06□□□□□ -2.4
TRAJ54-201ENST00000390484 KMT2AQ03164 3969 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 DNAH10Q8IVF4 4471 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 DNAH11Q96DT5 4516 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 PKHD1P08F94 4074 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 CMYA5Q8N3K9 4069 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 DYNC2H1Q8NCM8 4307 aaKnown RBP0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 APOBP04114 4563 aaKnown RBP0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 ANK3Q12955 4377 aaKnown RBP0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 LOC100996750A0A140TA64 210 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 POTEB3A0JP26 581 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 POTEFA5A3E0 1075 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 POTEB2H3BUK9 544 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 LCE2BO14633 110 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 POTEJP0CG39 1038 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 MAPK8IP2Q13387 824 aaPredicted RBP0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 LCE2AQ5TA79 106 aaPredicted RBP0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 POTEHQ6S545 545 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 POTEBQ6S5H4 581 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP9-9Q9BYP9 154 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP9-4Q9BYQ2 154 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP4-6Q9BYQ5 205 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 DNAH6Q9C0G6 4158 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 MACF1Q9UPN3 7388 aaKnown RBP0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 FRAS1Q86XX4 4008 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 FAT2Q9NYQ8 4349 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 VPS13DQ5THJ4 4388 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 DNAH9Q9NYC9 4486 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 TNXBP22105 4242 aa0.05□□□□□ -2.4
TRAJ54-201ENST00000390484 DNAH1Q9P2D7 4330 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 DNAH3Q8TD57 4116 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 DNAH8Q96JB1 4490 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 HSPG2P98160 4391 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP9-6A0A140TA67 174 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 KDM4FA0A1W2PPD8 638 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 SLC4A2P04920 1241 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 ADRA2BP18089 450 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 LORP23490 312 aaPredicted RBP0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 HOXD11P31277 338 aaPredicted RBP0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 GSK3AP49840 483 aa0.04□□□□□ -2.4
TRAJ54-201ENST00000390484 LCE2CQ5TA81 110 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms