RNA–Protein interactions for RNA: ENST00000384920.1

MIR558-201, microRNA 558, humanhuman

BASIC

Gene MIR558, Length 94 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR558-201ENST00000384920 AEBP2Q6ZN18 517 aaPredicted RBP17.04■□□□□ 0.32
MIR558-201ENST00000384920 CHIC1Q5VXU3 224 aa16.71■□□□□ 0.27
MIR558-201ENST00000384920 PHF23Q9BUL5 403 aaPredicted RBP14.73□□□□□ -0.05
MIR558-201ENST00000384920 SENP3Q9H4L4 574 aaPredicted RBP14.41□□□□□ -0.1
MIR558-201ENST00000384920 PLPPR3Q6T4P5 718 aa13.61□□□□□ -0.23
MIR558-201ENST00000384920 FOXD1Q16676 465 aa13.38□□□□□ -0.27
MIR558-201ENST00000384920 ADRA2BP18089 450 aa12.98□□□□□ -0.33
MIR558-201ENST00000384920 PPP6R1Q9UPN7 881 aa12.98□□□□□ -0.33
MIR558-201ENST00000384920 PIAS4Q8N2W9 510 aaPredicted RBP12.65□□□□□ -0.38
MIR558-201ENST00000384920 MSH5O43196 834 aa12.26□□□□□ -0.45
MIR558-201ENST00000384920 PPP4R3CPQ6ZMV5 832 aa12.01□□□□□ -0.49
MIR558-201ENST00000384920 KCNA4P22459 653 aa11.87□□□□□ -0.51
MIR558-201ENST00000384920 SCAF1Q9H7N4 1312 aaKnown RBP11.82□□□□□ -0.52
MIR558-201ENST00000384920 MAPK8IP2Q13387 824 aaPredicted RBP11.75□□□□□ -0.53
MIR558-201ENST00000384920 NCBP3Q53F19 620 aaKnown RBP11.71□□□□□ -0.53
MIR558-201ENST00000384920 CNKSR2Q8WXI2 1034 aa11.64□□□□□ -0.55
MIR558-201ENST00000384920 NPM3O75607 178 aaKnown RBP11.56□□□□□ -0.56
MIR558-201ENST00000384920 DMRT2Q9Y5R5 561 aa11.52□□□□□ -0.57
MIR558-201ENST00000384920 RNF216Q9NWF9 866 aaPredicted RBP11.38□□□□□ -0.59
MIR558-201ENST00000384920 SLC4A1APQ9BWU0 796 aaKnown RBP11.32□□□□□ -0.6
MIR558-201ENST00000384920 HOXD11P31277 338 aaPredicted RBP11.31□□□□□ -0.6
MIR558-201ENST00000384920 EHMT2Q96KQ7 1210 aa11.14□□□□□ -0.63
MIR558-201ENST00000384920 DNAJC5BQ9UF47 199 aa11.14□□□□□ -0.63
MIR558-201ENST00000384920 DCAF8L1A6NGE4 600 aa11.06□□□□□ -0.64
MIR558-201ENST00000384920 POTEDQ86YR6 584 aa11.03□□□□□ -0.64
MIR558-201ENST00000384920 ZBTB22O15209 634 aa10.94□□□□□ -0.66
MIR558-201ENST00000384920 CSRNP3Q8WYN3 585 aa10.94□□□□□ -0.66
MIR558-201ENST00000384920 SLC4A2P04920 1241 aa10.9□□□□□ -0.66
MIR558-201ENST00000384920 FOXD4L1Q9NU39 408 aa10.87□□□□□ -0.67
MIR558-201ENST00000384920 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.82□□□□□ -0.68
MIR558-201ENST00000384920 MYCNP04198 464 aaPredicted RBP10.66□□□□□ -0.7
MIR558-201ENST00000384920 U3KPZ7 1027 aaPredicted RBP10.64□□□□□ -0.71
MIR558-201ENST00000384920 RNF39Q9H2S5 420 aa10.55□□□□□ -0.72
MIR558-201ENST00000384920 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.5□□□□□ -0.73
MIR558-201ENST00000384920 HNRNPUL2Q1KMD3 747 aaKnown RBP10.5□□□□□ -0.73
MIR558-201ENST00000384920 SAMD1Q6SPF0 538 aaPredicted RBP10.49□□□□□ -0.73
MIR558-201ENST00000384920 ATXN8OSP0DMR3 200 aa10.46□□□□□ -0.73
MIR558-201ENST00000384920 ATF5Q9Y2D1 282 aaPredicted RBP10.41□□□□□ -0.74
MIR558-201ENST00000384920 C1QBPQ07021 282 aaKnown RBP10.4□□□□□ -0.74
MIR558-201ENST00000384920 APLP2Q06481 763 aa10.36□□□□□ -0.75
MIR558-201ENST00000384920 SPINK5Q9NQ38 1064 aaPredicted RBP10.34□□□□□ -0.75
MIR558-201ENST00000384920 CAPN15O75808 1086 aa10.28□□□□□ -0.76
MIR558-201ENST00000384920 TRHP20396 242 aaPredicted RBP10.27□□□□□ -0.77
MIR558-201ENST00000384920 ZNF219Q9P2Y4 722 aaPredicted RBP10.23□□□□□ -0.77
MIR558-201ENST00000384920 CACNB1Q02641 598 aaPredicted RBP10.21□□□□□ -0.77
MIR558-201ENST00000384920 ABCB7O75027 752 aa10.11□□□□□ -0.79
MIR558-201ENST00000384920 POLA2Q14181 598 aa10.1□□□□□ -0.79
MIR558-201ENST00000384920 DSG3P32926 999 aa10.07□□□□□ -0.8
MIR558-201ENST00000384920 MKRN4PQ13434 485 aaPredicted RBP9.95□□□□□ -0.82
MIR558-201ENST00000384920 FBLN2P98095 1184 aa9.93□□□□□ -0.82
MIR558-201ENST00000384920 ZBTB12Q9Y330 459 aaPredicted RBP9.9□□□□□ -0.82
MIR558-201ENST00000384920 FKBP8Q14318 412 aa9.89□□□□□ -0.83
MIR558-201ENST00000384920 OSCARQ8IYS5 282 aa9.78□□□□□ -0.84
MIR558-201ENST00000384920 SPDYE4A6NLX3 237 aa9.77□□□□□ -0.85
MIR558-201ENST00000384920 SPDYE2BA6NHP3 402 aa9.67□□□□□ -0.86
MIR558-201ENST00000384920 SPDYE6P0CI01 402 aa9.67□□□□□ -0.86
MIR558-201ENST00000384920 SPDYE2Q495Y8 402 aa9.67□□□□□ -0.86
MIR558-201ENST00000384920 ZNF692Q9BU19 519 aaPredicted RBP9.67□□□□□ -0.86
MIR558-201ENST00000384920 PROM2Q8N271 834 aa9.6□□□□□ -0.87
MIR558-201ENST00000384920 SSUH2Q9Y2M2 353 aa9.6□□□□□ -0.87
MIR558-201ENST00000384920 RBM42Q9BTD8 480 aaKnown RBP9.57□□□□□ -0.88
MIR558-201ENST00000384920 PABPN1Q86U42 306 aaKnown RBP eCLIP9.55□□□□□ -0.88
MIR558-201ENST00000384920 AKT1S1Q96B36 256 aa9.48□□□□□ -0.89
MIR558-201ENST00000384920 FBXO3Q9UK99 471 aa9.47□□□□□ -0.89
MIR558-201ENST00000384920 REM2Q8IYK8 340 aaPredicted RBP9.41□□□□□ -0.9
MIR558-201ENST00000384920 VASPP50552 380 aaPredicted RBP9.37□□□□□ -0.91
MIR558-201ENST00000384920 STAG3Q9UJ98 1225 aa9.37□□□□□ -0.91
MIR558-201ENST00000384920 SPDYE1Q8NFV5 336 aaPredicted RBP9.36□□□□□ -0.91
MIR558-201ENST00000384920 CLEC11AQ9Y240 323 aa9.34□□□□□ -0.91
MIR558-201ENST00000384920 PITPNM1O00562 1244 aa9.3□□□□□ -0.92
MIR558-201ENST00000384920 PRR29P0C7W0 189 aa9.26□□□□□ -0.93
MIR558-201ENST00000384920 IFNLR1Q8IU57 520 aaPredicted RBP9.26□□□□□ -0.93
MIR558-201ENST00000384920 MIER1Q8N108 512 aa9.26□□□□□ -0.93
MIR558-201ENST00000384920 PLCD3Q8N3E9 789 aa9.26□□□□□ -0.93
MIR558-201ENST00000384920 KLHL34Q8N239 644 aa9.2□□□□□ -0.94
MIR558-201ENST00000384920 PLEKHG5O94827 1062 aa9.18□□□□□ -0.94
MIR558-201ENST00000384920 RTN4Q9NQC3 1192 aaKnown RBP9.18□□□□□ -0.94
MIR558-201ENST00000384920 CREBZFQ9NS37 354 aa9.17□□□□□ -0.94
MIR558-201ENST00000384920 AMER1Q5JTC6 1135 aaPredicted RBP9.16□□□□□ -0.94
MIR558-201ENST00000384920 CHRDL2Q6WN34 429 aa9.16□□□□□ -0.94
MIR558-201ENST00000384920 CHADLQ6NUI6 762 aa9.12□□□□□ -0.95
MIR558-201ENST00000384920 SPOCK2Q92563 424 aa9.12□□□□□ -0.95
MIR558-201ENST00000384920 ZBTB47Q9UFB7 747 aaPredicted RBP9.11□□□□□ -0.95
MIR558-201ENST00000384920 FXR2P51116 673 aaKnown RBP eCLIP9.09□□□□□ -0.95
MIR558-201ENST00000384920 MNX1P50219 401 aaPredicted RBP9.08□□□□□ -0.96
MIR558-201ENST00000384920 PRKAR2AP13861 404 aaKnown RBP9.07□□□□□ -0.96
MIR558-201ENST00000384920 PIP4P2Q8N4L2 257 aa9.07□□□□□ -0.96
MIR558-201ENST00000384920 FARP1Q9Y4F1 1045 aaPredicted RBP9.01□□□□□ -0.97
MIR558-201ENST00000384920 NPM1P06748 294 aaKnown RBP eCLIP9□□□□□ -0.97
MIR558-201ENST00000384920 NUBP1P53384 320 aa9□□□□□ -0.97
MIR558-201ENST00000384920 PKD2Q13563 968 aa8.98□□□□□ -0.97
MIR558-201ENST00000384920 CIZ1Q9ULV3 898 aaPredicted RBP8.98□□□□□ -0.97
MIR558-201ENST00000384920 RASEFQ8IZ41 740 aa8.96□□□□□ -0.98
MIR558-201ENST00000384920 DCAF8Q5TAQ9 597 aa8.94□□□□□ -0.98
MIR558-201ENST00000384920 FAM212AQ96EL1 285 aa8.93□□□□□ -0.98
MIR558-201ENST00000384920 ECM2O94769 699 aaPredicted RBP8.91□□□□□ -0.98
MIR558-201ENST00000384920 GSE1Q14687 1217 aa8.91□□□□□ -0.98
MIR558-201ENST00000384920 TSPYL2Q9H2G4 693 aaPredicted RBP8.89□□□□□ -0.99
MIR558-201ENST00000384920 DCAF8L2P0C7V8 631 aa8.84□□□□□ -0.99
MIR558-201ENST00000384920 TRIM41Q8WV44 630 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms