RNA–Protein interactions for RNA: ENST00000384664.1

RNU6-1060P-201, Transcript of RNA, U6 small nuclear 1060, pseudogene, humanhuman

BASIC

Gene RNU6-1060P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1060P-201ENST00000384664 AEBP2Q6ZN18 517 aaPredicted RBP16.64■□□□□ 0.25
RNU6-1060P-201ENST00000384664 CHIC1Q5VXU3 224 aa16.35■□□□□ 0.21
RNU6-1060P-201ENST00000384664 PHF23Q9BUL5 403 aaPredicted RBP14.37□□□□□ -0.11
RNU6-1060P-201ENST00000384664 SENP3Q9H4L4 574 aaPredicted RBP14.12□□□□□ -0.15
RNU6-1060P-201ENST00000384664 PLPPR3Q6T4P5 718 aa13.29□□□□□ -0.28
RNU6-1060P-201ENST00000384664 FOXD1Q16676 465 aa13.08□□□□□ -0.32
RNU6-1060P-201ENST00000384664 PPP6R1Q9UPN7 881 aa12.63□□□□□ -0.39
RNU6-1060P-201ENST00000384664 ADRA2BP18089 450 aa12.6□□□□□ -0.39
RNU6-1060P-201ENST00000384664 PIAS4Q8N2W9 510 aaPredicted RBP12.31□□□□□ -0.44
RNU6-1060P-201ENST00000384664 POTEDQ86YR6 584 aa12.16□□□□□ -0.46
RNU6-1060P-201ENST00000384664 MSH5O43196 834 aa12.06□□□□□ -0.48
RNU6-1060P-201ENST00000384664 PPP4R3CPQ6ZMV5 832 aa11.71□□□□□ -0.53
RNU6-1060P-201ENST00000384664 SCAF1Q9H7N4 1312 aaKnown RBP11.57□□□□□ -0.56
RNU6-1060P-201ENST00000384664 KCNA4P22459 653 aa11.5□□□□□ -0.57
RNU6-1060P-201ENST00000384664 NCBP3Q53F19 620 aaKnown RBP11.43□□□□□ -0.58
RNU6-1060P-201ENST00000384664 MAPK8IP2Q13387 824 aaPredicted RBP11.41□□□□□ -0.58
RNU6-1060P-201ENST00000384664 CNKSR2Q8WXI2 1034 aa11.38□□□□□ -0.59
RNU6-1060P-201ENST00000384664 DMRT2Q9Y5R5 561 aa11.29□□□□□ -0.6
RNU6-1060P-201ENST00000384664 NPM3O75607 178 aaKnown RBP11.26□□□□□ -0.61
RNU6-1060P-201ENST00000384664 RNF216Q9NWF9 866 aaPredicted RBP11.16□□□□□ -0.62
RNU6-1060P-201ENST00000384664 HOXD11P31277 338 aaPredicted RBP11.11□□□□□ -0.63
RNU6-1060P-201ENST00000384664 DNAJC5BQ9UF47 199 aa11.07□□□□□ -0.64
RNU6-1060P-201ENST00000384664 SLC4A1APQ9BWU0 796 aaKnown RBP10.95□□□□□ -0.66
RNU6-1060P-201ENST00000384664 DCAF8L1A6NGE4 600 aa10.67□□□□□ -0.7
RNU6-1060P-201ENST00000384664 EHMT2Q96KQ7 1210 aa10.66□□□□□ -0.7
RNU6-1060P-201ENST00000384664 SLC4A2P04920 1241 aa10.63□□□□□ -0.71
RNU6-1060P-201ENST00000384664 CSRNP3Q8WYN3 585 aa10.6□□□□□ -0.71
RNU6-1060P-201ENST00000384664 ZBTB22O15209 634 aa10.59□□□□□ -0.71
RNU6-1060P-201ENST00000384664 FOXD4L1Q9NU39 408 aa10.59□□□□□ -0.71
RNU6-1060P-201ENST00000384664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.5□□□□□ -0.73
RNU6-1060P-201ENST00000384664 MYCNP04198 464 aaPredicted RBP10.42□□□□□ -0.74
RNU6-1060P-201ENST00000384664 U3KPZ7 1027 aaPredicted RBP10.38□□□□□ -0.75
RNU6-1060P-201ENST00000384664 RNF39Q9H2S5 420 aa10.34□□□□□ -0.75
RNU6-1060P-201ENST00000384664 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.29□□□□□ -0.76
RNU6-1060P-201ENST00000384664 HNRNPUL2Q1KMD3 747 aaKnown RBP10.29□□□□□ -0.76
RNU6-1060P-201ENST00000384664 ATXN8OSP0DMR3 200 aa10.26□□□□□ -0.77
RNU6-1060P-201ENST00000384664 SAMD1Q6SPF0 538 aaPredicted RBP10.25□□□□□ -0.77
RNU6-1060P-201ENST00000384664 C1QBPQ07021 282 aaKnown RBP10.23□□□□□ -0.77
RNU6-1060P-201ENST00000384664 APLP2Q06481 763 aa10.16□□□□□ -0.78
RNU6-1060P-201ENST00000384664 ATF5Q9Y2D1 282 aaPredicted RBP10.1□□□□□ -0.79
RNU6-1060P-201ENST00000384664 SPINK5Q9NQ38 1064 aaPredicted RBP10.04□□□□□ -0.8
RNU6-1060P-201ENST00000384664 ZNF219Q9P2Y4 722 aaPredicted RBP10□□□□□ -0.81
RNU6-1060P-201ENST00000384664 CAPN15O75808 1086 aa9.97□□□□□ -0.81
RNU6-1060P-201ENST00000384664 CACNB1Q02641 598 aaPredicted RBP9.95□□□□□ -0.82
RNU6-1060P-201ENST00000384664 TRHP20396 242 aaPredicted RBP9.93□□□□□ -0.82
RNU6-1060P-201ENST00000384664 DSG3P32926 999 aa9.85□□□□□ -0.83
RNU6-1060P-201ENST00000384664 POLA2Q14181 598 aa9.82□□□□□ -0.84
RNU6-1060P-201ENST00000384664 ABCB7O75027 752 aa9.77□□□□□ -0.85
RNU6-1060P-201ENST00000384664 ZBTB12Q9Y330 459 aaPredicted RBP9.71□□□□□ -0.86
RNU6-1060P-201ENST00000384664 MKRN4PQ13434 485 aaPredicted RBP9.69□□□□□ -0.86
RNU6-1060P-201ENST00000384664 FBLN2P98095 1184 aa9.67□□□□□ -0.86
RNU6-1060P-201ENST00000384664 FKBP8Q14318 412 aa9.53□□□□□ -0.88
RNU6-1060P-201ENST00000384664 SPDYE4A6NLX3 237 aa9.47□□□□□ -0.89
RNU6-1060P-201ENST00000384664 OSCARQ8IYS5 282 aa9.47□□□□□ -0.89
RNU6-1060P-201ENST00000384664 SPDYE2BA6NHP3 402 aa9.46□□□□□ -0.9
RNU6-1060P-201ENST00000384664 SPDYE6P0CI01 402 aa9.46□□□□□ -0.9
RNU6-1060P-201ENST00000384664 SPDYE2Q495Y8 402 aa9.46□□□□□ -0.9
RNU6-1060P-201ENST00000384664 PROM2Q8N271 834 aa9.43□□□□□ -0.9
RNU6-1060P-201ENST00000384664 SSUH2Q9Y2M2 353 aa9.41□□□□□ -0.9
RNU6-1060P-201ENST00000384664 RBM42Q9BTD8 480 aaKnown RBP9.39□□□□□ -0.91
RNU6-1060P-201ENST00000384664 ZNF692Q9BU19 519 aaPredicted RBP9.38□□□□□ -0.91
RNU6-1060P-201ENST00000384664 POTEHQ6S545 545 aa9.31□□□□□ -0.92
RNU6-1060P-201ENST00000384664 AKT1S1Q96B36 256 aa9.3□□□□□ -0.92
RNU6-1060P-201ENST00000384664 PABPN1Q86U42 306 aaKnown RBP eCLIP9.26□□□□□ -0.93
RNU6-1060P-201ENST00000384664 FBXO3Q9UK99 471 aa9.22□□□□□ -0.93
RNU6-1060P-201ENST00000384664 REM2Q8IYK8 340 aaPredicted RBP9.18□□□□□ -0.94
RNU6-1060P-201ENST00000384664 STAG3Q9UJ98 1225 aa9.17□□□□□ -0.94
RNU6-1060P-201ENST00000384664 SPDYE1Q8NFV5 336 aaPredicted RBP9.14□□□□□ -0.95
RNU6-1060P-201ENST00000384664 VASPP50552 380 aaPredicted RBP9.08□□□□□ -0.96
RNU6-1060P-201ENST00000384664 PITPNM1O00562 1244 aa9.06□□□□□ -0.96
RNU6-1060P-201ENST00000384664 CLEC11AQ9Y240 323 aa9.02□□□□□ -0.97
RNU6-1060P-201ENST00000384664 PRR29P0C7W0 189 aa9□□□□□ -0.97
RNU6-1060P-201ENST00000384664 IFNLR1Q8IU57 520 aaPredicted RBP8.97□□□□□ -0.97
RNU6-1060P-201ENST00000384664 MIER1Q8N108 512 aa8.95□□□□□ -0.98
RNU6-1060P-201ENST00000384664 CHRDL2Q6WN34 429 aa8.94□□□□□ -0.98
RNU6-1060P-201ENST00000384664 PLCD3Q8N3E9 789 aa8.94□□□□□ -0.98
RNU6-1060P-201ENST00000384664 FXR2P51116 673 aaKnown RBP eCLIP8.93□□□□□ -0.98
RNU6-1060P-201ENST00000384664 CREBZFQ9NS37 354 aa8.93□□□□□ -0.98
RNU6-1060P-201ENST00000384664 PLEKHG5O94827 1062 aa8.91□□□□□ -0.98
RNU6-1060P-201ENST00000384664 ZBTB47Q9UFB7 747 aaPredicted RBP8.9□□□□□ -0.98
RNU6-1060P-201ENST00000384664 MNX1P50219 401 aaPredicted RBP8.88□□□□□ -0.99
RNU6-1060P-201ENST00000384664 AMER1Q5JTC6 1135 aaPredicted RBP8.86□□□□□ -0.99
RNU6-1060P-201ENST00000384664 KLHL34Q8N239 644 aa8.85□□□□□ -0.99
RNU6-1060P-201ENST00000384664 PIP4P2Q8N4L2 257 aa8.85□□□□□ -0.99
RNU6-1060P-201ENST00000384664 SPOCK2Q92563 424 aa8.84□□□□□ -0.99
RNU6-1060P-201ENST00000384664 PRKAR2AP13861 404 aaKnown RBP8.82□□□□□ -1
RNU6-1060P-201ENST00000384664 CHADLQ6NUI6 762 aa8.81□□□□□ -1
RNU6-1060P-201ENST00000384664 RTN4Q9NQC3 1192 aaKnown RBP8.79□□□□□ -1
RNU6-1060P-201ENST00000384664 FARP1Q9Y4F1 1045 aaPredicted RBP8.79□□□□□ -1
RNU6-1060P-201ENST00000384664 NUBP1P53384 320 aa8.78□□□□□ -1
RNU6-1060P-201ENST00000384664 NPM1P06748 294 aaKnown RBP eCLIP8.77□□□□□ -1.01
RNU6-1060P-201ENST00000384664 PKD2Q13563 968 aa8.7□□□□□ -1.02
RNU6-1060P-201ENST00000384664 GSE1Q14687 1217 aa8.69□□□□□ -1.02
RNU6-1060P-201ENST00000384664 RASEFQ8IZ41 740 aa8.69□□□□□ -1.02
RNU6-1060P-201ENST00000384664 FAM212AQ96EL1 285 aa8.67□□□□□ -1.02
RNU6-1060P-201ENST00000384664 TRIM41Q8WV44 630 aa8.66□□□□□ -1.02
RNU6-1060P-201ENST00000384664 CIZ1Q9ULV3 898 aaPredicted RBP8.64□□□□□ -1.03
RNU6-1060P-201ENST00000384664 DCAF8Q5TAQ9 597 aa8.63□□□□□ -1.03
RNU6-1060P-201ENST00000384664 C19orf67A6NJJ6 358 aa8.61□□□□□ -1.03
RNU6-1060P-201ENST00000384664 CHRM1P11229 460 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms