RNA–Protein interactions for RNA: ENST00000384302.1

RNU6-43P-201, Transcript of RNA, U6 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU6-43P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-43P-201ENST00000384302 AEBP2Q6ZN18 517 aaPredicted RBP21.37■■□□□ 1.01
RNU6-43P-201ENST00000384302 CHIC1Q5VXU3 224 aa20.29■□□□□ 0.84
RNU6-43P-201ENST00000384302 SENP3Q9H4L4 574 aaPredicted RBP18.26■□□□□ 0.51
RNU6-43P-201ENST00000384302 PHF23Q9BUL5 403 aaPredicted RBP18.02■□□□□ 0.48
RNU6-43P-201ENST00000384302 FOXD1Q16676 465 aa17■□□□□ 0.31
RNU6-43P-201ENST00000384302 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
RNU6-43P-201ENST00000384302 MSH5O43196 834 aa15.93■□□□□ 0.14
RNU6-43P-201ENST00000384302 PIAS4Q8N2W9 510 aaPredicted RBP15.9■□□□□ 0.14
RNU6-43P-201ENST00000384302 PPP6R1Q9UPN7 881 aa15.89■□□□□ 0.13
RNU6-43P-201ENST00000384302 ADRA2BP18089 450 aa15.85■□□□□ 0.13
RNU6-43P-201ENST00000384302 POTEDQ86YR6 584 aa15.56■□□□□ 0.08
RNU6-43P-201ENST00000384302 MAPK8IP2Q13387 824 aaPredicted RBP14.56□□□□□ -0.08
RNU6-43P-201ENST00000384302 SCAF1Q9H7N4 1312 aaKnown RBP14.52□□□□□ -0.08
RNU6-43P-201ENST00000384302 DMRT2Q9Y5R5 561 aa14.46□□□□□ -0.09
RNU6-43P-201ENST00000384302 PPP4R3CPQ6ZMV5 832 aa14.21□□□□□ -0.13
RNU6-43P-201ENST00000384302 CNKSR2Q8WXI2 1034 aa13.96□□□□□ -0.17
RNU6-43P-201ENST00000384302 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
RNU6-43P-201ENST00000384302 HOXD11P31277 338 aaPredicted RBP13.91□□□□□ -0.18
RNU6-43P-201ENST00000384302 RNF216Q9NWF9 866 aaPredicted RBP13.83□□□□□ -0.2
RNU6-43P-201ENST00000384302 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
RNU6-43P-201ENST00000384302 NCBP3Q53F19 620 aaKnown RBP13.69□□□□□ -0.22
RNU6-43P-201ENST00000384302 RNF39Q9H2S5 420 aa13.58□□□□□ -0.24
RNU6-43P-201ENST00000384302 NPM3O75607 178 aaKnown RBP13.46□□□□□ -0.25
RNU6-43P-201ENST00000384302 DNAJC5BQ9UF47 199 aa13.44□□□□□ -0.26
RNU6-43P-201ENST00000384302 C1QBPQ07021 282 aaKnown RBP13.4□□□□□ -0.26
RNU6-43P-201ENST00000384302 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.31□□□□□ -0.28
RNU6-43P-201ENST00000384302 KCNA4P22459 653 aa13.19□□□□□ -0.3
RNU6-43P-201ENST00000384302 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
RNU6-43P-201ENST00000384302 SLC4A2P04920 1241 aa12.85□□□□□ -0.35
RNU6-43P-201ENST00000384302 CAPN15O75808 1086 aa12.81□□□□□ -0.36
RNU6-43P-201ENST00000384302 SPINK5Q9NQ38 1064 aaPredicted RBP12.81□□□□□ -0.36
RNU6-43P-201ENST00000384302 DSG3P32926 999 aa12.72□□□□□ -0.37
RNU6-43P-201ENST00000384302 APLP2Q06481 763 aa12.66□□□□□ -0.38
RNU6-43P-201ENST00000384302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.65□□□□□ -0.38
RNU6-43P-201ENST00000384302 HNRNPUL2Q1KMD3 747 aaKnown RBP12.65□□□□□ -0.38
RNU6-43P-201ENST00000384302 TRHP20396 242 aaPredicted RBP12.61□□□□□ -0.39
RNU6-43P-201ENST00000384302 ZNF219Q9P2Y4 722 aaPredicted RBP12.58□□□□□ -0.4
RNU6-43P-201ENST00000384302 SAMD1Q6SPF0 538 aaPredicted RBP12.57□□□□□ -0.4
RNU6-43P-201ENST00000384302 ABCB7O75027 752 aa12.51□□□□□ -0.41
RNU6-43P-201ENST00000384302 SLC4A1APQ9BWU0 796 aaKnown RBP12.47□□□□□ -0.41
RNU6-43P-201ENST00000384302 MYCNP04198 464 aaPredicted RBP12.46□□□□□ -0.41
RNU6-43P-201ENST00000384302 FOXD4L1Q9NU39 408 aa12.32□□□□□ -0.44
RNU6-43P-201ENST00000384302 POLA2Q14181 598 aa12.26□□□□□ -0.45
RNU6-43P-201ENST00000384302 POTEHQ6S545 545 aa12.2□□□□□ -0.46
RNU6-43P-201ENST00000384302 ATF5Q9Y2D1 282 aaPredicted RBP12.16□□□□□ -0.46
RNU6-43P-201ENST00000384302 RBM42Q9BTD8 480 aaKnown RBP12.15□□□□□ -0.46
RNU6-43P-201ENST00000384302 ZBTB22O15209 634 aa12.11□□□□□ -0.47
RNU6-43P-201ENST00000384302 ZBTB12Q9Y330 459 aaPredicted RBP12.01□□□□□ -0.49
RNU6-43P-201ENST00000384302 ATXN8OSP0DMR3 200 aa11.94□□□□□ -0.5
RNU6-43P-201ENST00000384302 CHRDL2Q6WN34 429 aa11.88□□□□□ -0.51
RNU6-43P-201ENST00000384302 AKT1S1Q96B36 256 aa11.87□□□□□ -0.51
RNU6-43P-201ENST00000384302 OSCARQ8IYS5 282 aa11.86□□□□□ -0.51
RNU6-43P-201ENST00000384302 REM2Q8IYK8 340 aaPredicted RBP11.75□□□□□ -0.53
RNU6-43P-201ENST00000384302 FBLN2P98095 1184 aa11.72□□□□□ -0.53
RNU6-43P-201ENST00000384302 SPDYE2BA6NHP3 402 aa11.63□□□□□ -0.55
RNU6-43P-201ENST00000384302 SPDYE6P0CI01 402 aa11.63□□□□□ -0.55
RNU6-43P-201ENST00000384302 SPDYE2Q495Y8 402 aa11.63□□□□□ -0.55
RNU6-43P-201ENST00000384302 PITPNM1O00562 1244 aa11.62□□□□□ -0.55
RNU6-43P-201ENST00000384302 PIP4P2Q8N4L2 257 aa11.6□□□□□ -0.55
RNU6-43P-201ENST00000384302 MKRN4PQ13434 485 aaPredicted RBP11.59□□□□□ -0.55
RNU6-43P-201ENST00000384302 CSRNP3Q8WYN3 585 aa11.56□□□□□ -0.56
RNU6-43P-201ENST00000384302 FXR2P51116 673 aaKnown RBP eCLIP11.52□□□□□ -0.57
RNU6-43P-201ENST00000384302 ZNF692Q9BU19 519 aaPredicted RBP11.51□□□□□ -0.57
RNU6-43P-201ENST00000384302 SSUH2Q9Y2M2 353 aa11.46□□□□□ -0.57
RNU6-43P-201ENST00000384302 SPDYE1Q8NFV5 336 aaPredicted RBP11.44□□□□□ -0.58
RNU6-43P-201ENST00000384302 CLEC11AQ9Y240 323 aa11.44□□□□□ -0.58
RNU6-43P-201ENST00000384302 SP7Q8TDD2 431 aaPredicted RBP11.43□□□□□ -0.58
RNU6-43P-201ENST00000384302 EHMT2Q96KQ7 1210 aa11.43□□□□□ -0.58
RNU6-43P-201ENST00000384302 HAX1O00165 279 aa11.42□□□□□ -0.58
RNU6-43P-201ENST00000384302 PRKAR2AP13861 404 aaKnown RBP11.33□□□□□ -0.6
RNU6-43P-201ENST00000384302 PABPN1Q86U42 306 aaKnown RBP eCLIP11.33□□□□□ -0.6
RNU6-43P-201ENST00000384302 PRR29P0C7W0 189 aa11.25□□□□□ -0.61
RNU6-43P-201ENST00000384302 EVX2Q03828 476 aa11.24□□□□□ -0.61
RNU6-43P-201ENST00000384302 CHADLQ6NUI6 762 aa11.2□□□□□ -0.62
RNU6-43P-201ENST00000384302 C19orf67A6NJJ6 358 aa11.15□□□□□ -0.62
RNU6-43P-201ENST00000384302 SPDYE4A6NLX3 237 aa11.07□□□□□ -0.64
RNU6-43P-201ENST00000384302 FARP1Q9Y4F1 1045 aaPredicted RBP11.04□□□□□ -0.64
RNU6-43P-201ENST00000384302 STAG3Q9UJ98 1225 aa11.03□□□□□ -0.64
RNU6-43P-201ENST00000384302 GABBR2O75899 941 aa11□□□□□ -0.65
RNU6-43P-201ENST00000384302 CD44P16070 742 aaKnown RBP10.97□□□□□ -0.65
RNU6-43P-201ENST00000384302 CREBZFQ9NS37 354 aa10.94□□□□□ -0.66
RNU6-43P-201ENST00000384302 CLCN6P51797 869 aa10.83□□□□□ -0.68
RNU6-43P-201ENST00000384302 ZRANB1Q9UGI0 708 aa10.83□□□□□ -0.68
RNU6-43P-201ENST00000384302 ZNF579Q8NAF0 562 aaKnown RBP10.79□□□□□ -0.68
RNU6-43P-201ENST00000384302 NPM1P06748 294 aaKnown RBP eCLIP10.76□□□□□ -0.69
RNU6-43P-201ENST00000384302 PROM2Q8N271 834 aa10.76□□□□□ -0.69
RNU6-43P-201ENST00000384302 PAK3O75914 559 aaPredicted RBP10.74□□□□□ -0.69
RNU6-43P-201ENST00000384302 POTEIP0CG38 1075 aa10.74□□□□□ -0.69
RNU6-43P-201ENST00000384302 LHX8Q68G74 356 aa10.74□□□□□ -0.69
RNU6-43P-201ENST00000384302 MNX1P50219 401 aaPredicted RBP10.73□□□□□ -0.69
RNU6-43P-201ENST00000384302 DCBLD2Q96PD2 775 aa10.73□□□□□ -0.69
RNU6-43P-201ENST00000384302 GALR2O43603 387 aaPredicted RBP10.67□□□□□ -0.7
RNU6-43P-201ENST00000384302 PHF12Q96QT6 1004 aa10.66□□□□□ -0.7
RNU6-43P-201ENST00000384302 PLEKHG5O94827 1062 aa10.59□□□□□ -0.71
RNU6-43P-201ENST00000384302 MIER1Q8N108 512 aa10.58□□□□□ -0.72
RNU6-43P-201ENST00000384302 TSPYL2Q9H2G4 693 aaPredicted RBP10.57□□□□□ -0.72
RNU6-43P-201ENST00000384302 FKBP8Q14318 412 aa10.51□□□□□ -0.73
RNU6-43P-201ENST00000384302 MS4A3Q96HJ5 214 aa10.51□□□□□ -0.73
RNU6-43P-201ENST00000384302 PLCD3Q8N3E9 789 aa10.5□□□□□ -0.73
RNU6-43P-201ENST00000384302 CCDC61Q9Y6R9 512 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms