RNA–Protein interactions for RNA: ENST00000384276.1

RNU6-611P-201, Transcript of RNA, U6 small nuclear 611, pseudogene, humanhuman

BASIC

Gene RNU6-611P, Length 104 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-611P-201ENST00000384276 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
RNU6-611P-201ENST00000384276 CHIC1Q5VXU3 224 aa16.45■□□□□ 0.22
RNU6-611P-201ENST00000384276 SENP3Q9H4L4 574 aaPredicted RBP14.71□□□□□ -0.05
RNU6-611P-201ENST00000384276 PHF23Q9BUL5 403 aaPredicted RBP14.6□□□□□ -0.07
RNU6-611P-201ENST00000384276 FOXD1Q16676 465 aa13.8□□□□□ -0.2
RNU6-611P-201ENST00000384276 PLPPR3Q6T4P5 718 aa13.12□□□□□ -0.31
RNU6-611P-201ENST00000384276 PPP6R1Q9UPN7 881 aa12.97□□□□□ -0.33
RNU6-611P-201ENST00000384276 ADRA2BP18089 450 aa12.93□□□□□ -0.34
RNU6-611P-201ENST00000384276 PIAS4Q8N2W9 510 aaPredicted RBP12.87□□□□□ -0.35
RNU6-611P-201ENST00000384276 MSH5O43196 834 aa12.8□□□□□ -0.36
RNU6-611P-201ENST00000384276 POTEDQ86YR6 584 aa12.55□□□□□ -0.4
RNU6-611P-201ENST00000384276 MAPK8IP2Q13387 824 aaPredicted RBP11.89□□□□□ -0.51
RNU6-611P-201ENST00000384276 DMRT2Q9Y5R5 561 aa11.69□□□□□ -0.54
RNU6-611P-201ENST00000384276 SCAF1Q9H7N4 1312 aaKnown RBP11.68□□□□□ -0.54
RNU6-611P-201ENST00000384276 PPP4R3CPQ6ZMV5 832 aa11.56□□□□□ -0.56
RNU6-611P-201ENST00000384276 DCAF8L1A6NGE4 600 aa11.29□□□□□ -0.6
RNU6-611P-201ENST00000384276 CNKSR2Q8WXI2 1034 aa11.29□□□□□ -0.6
RNU6-611P-201ENST00000384276 HOXD11P31277 338 aaPredicted RBP11.26□□□□□ -0.61
RNU6-611P-201ENST00000384276 RNF216Q9NWF9 866 aaPredicted RBP11.17□□□□□ -0.62
RNU6-611P-201ENST00000384276 NCBP3Q53F19 620 aaKnown RBP11.05□□□□□ -0.64
RNU6-611P-201ENST00000384276 CACNB1Q02641 598 aaPredicted RBP11.04□□□□□ -0.64
RNU6-611P-201ENST00000384276 NPM3O75607 178 aaKnown RBP10.97□□□□□ -0.65
RNU6-611P-201ENST00000384276 RNF39Q9H2S5 420 aa10.97□□□□□ -0.65
RNU6-611P-201ENST00000384276 KCNA4P22459 653 aa10.81□□□□□ -0.68
RNU6-611P-201ENST00000384276 DNAJC5BQ9UF47 199 aa10.78□□□□□ -0.68
RNU6-611P-201ENST00000384276 C1QBPQ07021 282 aaKnown RBP10.77□□□□□ -0.69
RNU6-611P-201ENST00000384276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.77□□□□□ -0.69
RNU6-611P-201ENST00000384276 U3KPZ7 1027 aaPredicted RBP10.55□□□□□ -0.72
RNU6-611P-201ENST00000384276 SLC4A2P04920 1241 aa10.49□□□□□ -0.73
RNU6-611P-201ENST00000384276 SPINK5Q9NQ38 1064 aaPredicted RBP10.44□□□□□ -0.74
RNU6-611P-201ENST00000384276 CAPN15O75808 1086 aa10.39□□□□□ -0.75
RNU6-611P-201ENST00000384276 DSG3P32926 999 aa10.31□□□□□ -0.76
RNU6-611P-201ENST00000384276 TRHP20396 242 aaPredicted RBP10.24□□□□□ -0.77
RNU6-611P-201ENST00000384276 ABCB7O75027 752 aa10.18□□□□□ -0.78
RNU6-611P-201ENST00000384276 SLC4A1APQ9BWU0 796 aaKnown RBP10.17□□□□□ -0.78
RNU6-611P-201ENST00000384276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.15□□□□□ -0.78
RNU6-611P-201ENST00000384276 HNRNPUL2Q1KMD3 747 aaKnown RBP10.15□□□□□ -0.78
RNU6-611P-201ENST00000384276 APLP2Q06481 763 aa10.13□□□□□ -0.79
RNU6-611P-201ENST00000384276 SAMD1Q6SPF0 538 aaPredicted RBP10.12□□□□□ -0.79
RNU6-611P-201ENST00000384276 ZNF219Q9P2Y4 722 aaPredicted RBP10.12□□□□□ -0.79
RNU6-611P-201ENST00000384276 MYCNP04198 464 aaPredicted RBP10.08□□□□□ -0.8
RNU6-611P-201ENST00000384276 FOXD4L1Q9NU39 408 aa10.01□□□□□ -0.81
RNU6-611P-201ENST00000384276 ATF5Q9Y2D1 282 aaPredicted RBP9.97□□□□□ -0.81
RNU6-611P-201ENST00000384276 POLA2Q14181 598 aa9.96□□□□□ -0.82
RNU6-611P-201ENST00000384276 ZBTB22O15209 634 aa9.95□□□□□ -0.82
RNU6-611P-201ENST00000384276 POTEHQ6S545 545 aa9.83□□□□□ -0.84
RNU6-611P-201ENST00000384276 RBM42Q9BTD8 480 aaKnown RBP9.74□□□□□ -0.85
RNU6-611P-201ENST00000384276 ATXN8OSP0DMR3 200 aa9.65□□□□□ -0.86
RNU6-611P-201ENST00000384276 OSCARQ8IYS5 282 aa9.64□□□□□ -0.87
RNU6-611P-201ENST00000384276 ZBTB12Q9Y330 459 aaPredicted RBP9.64□□□□□ -0.87
RNU6-611P-201ENST00000384276 CHRDL2Q6WN34 429 aa9.6□□□□□ -0.87
RNU6-611P-201ENST00000384276 AKT1S1Q96B36 256 aa9.56□□□□□ -0.88
RNU6-611P-201ENST00000384276 REM2Q8IYK8 340 aaPredicted RBP9.52□□□□□ -0.89
RNU6-611P-201ENST00000384276 CSRNP3Q8WYN3 585 aa9.5□□□□□ -0.89
RNU6-611P-201ENST00000384276 MKRN4PQ13434 485 aaPredicted RBP9.48□□□□□ -0.89
RNU6-611P-201ENST00000384276 FBLN2P98095 1184 aa9.46□□□□□ -0.9
RNU6-611P-201ENST00000384276 PITPNM1O00562 1244 aa9.43□□□□□ -0.9
RNU6-611P-201ENST00000384276 EHMT2Q96KQ7 1210 aa9.41□□□□□ -0.9
RNU6-611P-201ENST00000384276 PIP4P2Q8N4L2 257 aa9.4□□□□□ -0.9
RNU6-611P-201ENST00000384276 SPDYE2BA6NHP3 402 aa9.38□□□□□ -0.91
RNU6-611P-201ENST00000384276 SPDYE6P0CI01 402 aa9.38□□□□□ -0.91
RNU6-611P-201ENST00000384276 SPDYE2Q495Y8 402 aa9.38□□□□□ -0.91
RNU6-611P-201ENST00000384276 ZNF692Q9BU19 519 aaPredicted RBP9.33□□□□□ -0.92
RNU6-611P-201ENST00000384276 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
RNU6-611P-201ENST00000384276 CLEC11AQ9Y240 323 aa9.28□□□□□ -0.92
RNU6-611P-201ENST00000384276 SSUH2Q9Y2M2 353 aa9.28□□□□□ -0.92
RNU6-611P-201ENST00000384276 HAX1O00165 279 aa9.22□□□□□ -0.93
RNU6-611P-201ENST00000384276 SPDYE1Q8NFV5 336 aaPredicted RBP9.22□□□□□ -0.93
RNU6-611P-201ENST00000384276 PABPN1Q86U42 306 aaKnown RBP eCLIP9.21□□□□□ -0.94
RNU6-611P-201ENST00000384276 SP7Q8TDD2 431 aaPredicted RBP9.2□□□□□ -0.94
RNU6-611P-201ENST00000384276 PRKAR2AP13861 404 aaKnown RBP9.18□□□□□ -0.94
RNU6-611P-201ENST00000384276 EVX2Q03828 476 aa9.18□□□□□ -0.94
RNU6-611P-201ENST00000384276 CHADLQ6NUI6 762 aa9.13□□□□□ -0.95
RNU6-611P-201ENST00000384276 PRR29P0C7W0 189 aa9.1□□□□□ -0.95
RNU6-611P-201ENST00000384276 C19orf67A6NJJ6 358 aa9.02□□□□□ -0.97
RNU6-611P-201ENST00000384276 SPDYE4A6NLX3 237 aa9.01□□□□□ -0.97
RNU6-611P-201ENST00000384276 FARP1Q9Y4F1 1045 aaPredicted RBP8.94□□□□□ -0.98
RNU6-611P-201ENST00000384276 GABBR2O75899 941 aa8.91□□□□□ -0.98
RNU6-611P-201ENST00000384276 CREBZFQ9NS37 354 aa8.9□□□□□ -0.98
RNU6-611P-201ENST00000384276 CD44P16070 742 aaKnown RBP8.88□□□□□ -0.99
RNU6-611P-201ENST00000384276 STAG3Q9UJ98 1225 aa8.87□□□□□ -0.99
RNU6-611P-201ENST00000384276 ZRANB1Q9UGI0 708 aa8.78□□□□□ -1
RNU6-611P-201ENST00000384276 POTEIP0CG38 1075 aa8.75□□□□□ -1.01
RNU6-611P-201ENST00000384276 PROM2Q8N271 834 aa8.75□□□□□ -1.01
RNU6-611P-201ENST00000384276 MNX1P50219 401 aaPredicted RBP8.74□□□□□ -1.01
RNU6-611P-201ENST00000384276 ZNF579Q8NAF0 562 aaKnown RBP8.71□□□□□ -1.02
RNU6-611P-201ENST00000384276 GALR2O43603 387 aaPredicted RBP8.68□□□□□ -1.02
RNU6-611P-201ENST00000384276 PHF12Q96QT6 1004 aa8.68□□□□□ -1.02
RNU6-611P-201ENST00000384276 NPM1P06748 294 aaKnown RBP eCLIP8.67□□□□□ -1.02
RNU6-611P-201ENST00000384276 LHX8Q68G74 356 aa8.66□□□□□ -1.02
RNU6-611P-201ENST00000384276 DCBLD2Q96PD2 775 aa8.64□□□□□ -1.03
RNU6-611P-201ENST00000384276 PAK3O75914 559 aaPredicted RBP8.63□□□□□ -1.03
RNU6-611P-201ENST00000384276 CLCN6P51797 869 aa8.63□□□□□ -1.03
RNU6-611P-201ENST00000384276 MIER1Q8N108 512 aa8.62□□□□□ -1.03
RNU6-611P-201ENST00000384276 FKBP8Q14318 412 aa8.61□□□□□ -1.03
RNU6-611P-201ENST00000384276 TSPYL2Q9H2G4 693 aaPredicted RBP8.6□□□□□ -1.03
RNU6-611P-201ENST00000384276 MS4A3Q96HJ5 214 aa8.54□□□□□ -1.04
RNU6-611P-201ENST00000384276 PELP1Q8IZL8 1130 aaKnown RBP8.53□□□□□ -1.04
RNU6-611P-201ENST00000384276 RASEFQ8IZ41 740 aa8.52□□□□□ -1.05
RNU6-611P-201ENST00000384276 PLCD3Q8N3E9 789 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms