RNA–Protein interactions for RNA: ENST00000384245.1

RNU6-17P-201, Transcript of RNA, U6 small nuclear 17, pseudogene, humanhuman

BASIC

Gene RNU6-17P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-17P-201ENST00000384245 AEBP2Q6ZN18 517 aaPredicted RBP15.68■□□□□ 0.1
RNU6-17P-201ENST00000384245 CHIC1Q5VXU3 224 aa14.55□□□□□ -0.08
RNU6-17P-201ENST00000384245 SENP3Q9H4L4 574 aaPredicted RBP13.42□□□□□ -0.26
RNU6-17P-201ENST00000384245 PHF23Q9BUL5 403 aaPredicted RBP13.14□□□□□ -0.31
RNU6-17P-201ENST00000384245 POTEDQ86YR6 584 aa13.03□□□□□ -0.32
RNU6-17P-201ENST00000384245 FOXD1Q16676 465 aa12.63□□□□□ -0.39
RNU6-17P-201ENST00000384245 MSH5O43196 834 aa12.06□□□□□ -0.48
RNU6-17P-201ENST00000384245 PIAS4Q8N2W9 510 aaPredicted RBP11.6□□□□□ -0.55
RNU6-17P-201ENST00000384245 PPP6R1Q9UPN7 881 aa11.26□□□□□ -0.61
RNU6-17P-201ENST00000384245 ADRA2BP18089 450 aa11.16□□□□□ -0.62
RNU6-17P-201ENST00000384245 PLPPR3Q6T4P5 718 aa11.12□□□□□ -0.63
RNU6-17P-201ENST00000384245 CACNB1Q02641 598 aaPredicted RBP10.76□□□□□ -0.69
RNU6-17P-201ENST00000384245 DMRT2Q9Y5R5 561 aa10.56□□□□□ -0.72
RNU6-17P-201ENST00000384245 MAPK8IP2Q13387 824 aaPredicted RBP10.47□□□□□ -0.73
RNU6-17P-201ENST00000384245 RNF39Q9H2S5 420 aa10.26□□□□□ -0.77
RNU6-17P-201ENST00000384245 SCAF1Q9H7N4 1312 aaKnown RBP10.14□□□□□ -0.79
RNU6-17P-201ENST00000384245 DCAF8L1A6NGE4 600 aa10.08□□□□□ -0.8
RNU6-17P-201ENST00000384245 POTEHQ6S545 545 aa10.05□□□□□ -0.8
RNU6-17P-201ENST00000384245 C1QBPQ07021 282 aaKnown RBP10.03□□□□□ -0.8
RNU6-17P-201ENST00000384245 HOXD11P31277 338 aaPredicted RBP9.89□□□□□ -0.83
RNU6-17P-201ENST00000384245 PPP4R3CPQ6ZMV5 832 aa9.82□□□□□ -0.84
RNU6-17P-201ENST00000384245 DNAJC5BQ9UF47 199 aa9.69□□□□□ -0.86
RNU6-17P-201ENST00000384245 RNF216Q9NWF9 866 aaPredicted RBP9.6□□□□□ -0.87
RNU6-17P-201ENST00000384245 CNKSR2Q8WXI2 1034 aa9.54□□□□□ -0.88
RNU6-17P-201ENST00000384245 KCNA4P22459 653 aa9.51□□□□□ -0.89
RNU6-17P-201ENST00000384245 NCBP3Q53F19 620 aaKnown RBP9.5□□□□□ -0.89
RNU6-17P-201ENST00000384245 NPM3O75607 178 aaKnown RBP9.4□□□□□ -0.9
RNU6-17P-201ENST00000384245 DSG3P32926 999 aa9.36□□□□□ -0.91
RNU6-17P-201ENST00000384245 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.35□□□□□ -0.91
RNU6-17P-201ENST00000384245 SPINK5Q9NQ38 1064 aaPredicted RBP9.22□□□□□ -0.93
RNU6-17P-201ENST00000384245 CAPN15O75808 1086 aa9.19□□□□□ -0.94
RNU6-17P-201ENST00000384245 U3KPZ7 1027 aaPredicted RBP9.16□□□□□ -0.94
RNU6-17P-201ENST00000384245 SP7Q8TDD2 431 aaPredicted RBP9.09□□□□□ -0.95
RNU6-17P-201ENST00000384245 CHRDL2Q6WN34 429 aa9.02□□□□□ -0.97
RNU6-17P-201ENST00000384245 SLC4A1APQ9BWU0 796 aaKnown RBP9.02□□□□□ -0.97
RNU6-17P-201ENST00000384245 ABCB7O75027 752 aa8.94□□□□□ -0.98
RNU6-17P-201ENST00000384245 SLC4A2P04920 1241 aa8.9□□□□□ -0.98
RNU6-17P-201ENST00000384245 RBM42Q9BTD8 480 aaKnown RBP8.9□□□□□ -0.98
RNU6-17P-201ENST00000384245 TRHP20396 242 aaPredicted RBP8.87□□□□□ -0.99
RNU6-17P-201ENST00000384245 ZNF219Q9P2Y4 722 aaPredicted RBP8.84□□□□□ -0.99
RNU6-17P-201ENST00000384245 ZBTB22O15209 634 aa8.74□□□□□ -1.01
RNU6-17P-201ENST00000384245 FOXD4L1Q9NU39 408 aa8.74□□□□□ -1.01
RNU6-17P-201ENST00000384245 APLP2Q06481 763 aa8.73□□□□□ -1.01
RNU6-17P-201ENST00000384245 EHMT2Q96KQ7 1210 aa8.7□□□□□ -1.02
RNU6-17P-201ENST00000384245 PIP4P2Q8N4L2 257 aa8.67□□□□□ -1.02
RNU6-17P-201ENST00000384245 MYCNP04198 464 aaPredicted RBP8.66□□□□□ -1.02
RNU6-17P-201ENST00000384245 HAX1O00165 279 aa8.65□□□□□ -1.02
RNU6-17P-201ENST00000384245 CSRNP3Q8WYN3 585 aa8.61□□□□□ -1.03
RNU6-17P-201ENST00000384245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.59□□□□□ -1.03
RNU6-17P-201ENST00000384245 HNRNPUL2Q1KMD3 747 aaKnown RBP8.59□□□□□ -1.03
RNU6-17P-201ENST00000384245 SAMD1Q6SPF0 538 aaPredicted RBP8.57□□□□□ -1.04
RNU6-17P-201ENST00000384245 EVX2Q03828 476 aa8.56□□□□□ -1.04
RNU6-17P-201ENST00000384245 AKT1S1Q96B36 256 aa8.56□□□□□ -1.04
RNU6-17P-201ENST00000384245 PLSCR2Q9NRY7 297 aa8.54□□□□□ -1.04
RNU6-17P-201ENST00000384245 FXR2P51116 673 aaKnown RBP eCLIP8.5□□□□□ -1.05
RNU6-17P-201ENST00000384245 LHX8Q68G74 356 aa8.49□□□□□ -1.05
RNU6-17P-201ENST00000384245 REM2Q8IYK8 340 aaPredicted RBP8.49□□□□□ -1.05
RNU6-17P-201ENST00000384245 ATF5Q9Y2D1 282 aaPredicted RBP8.49□□□□□ -1.05
RNU6-17P-201ENST00000384245 POLA2Q14181 598 aa8.48□□□□□ -1.05
RNU6-17P-201ENST00000384245 PITPNM1O00562 1244 aa8.43□□□□□ -1.06
RNU6-17P-201ENST00000384245 ATXN8OSP0DMR3 200 aa8.4□□□□□ -1.06
RNU6-17P-201ENST00000384245 GABBR2O75899 941 aa8.3□□□□□ -1.08
RNU6-17P-201ENST00000384245 OSCARQ8IYS5 282 aa8.28□□□□□ -1.08
RNU6-17P-201ENST00000384245 C19orf67A6NJJ6 358 aa8.26□□□□□ -1.09
RNU6-17P-201ENST00000384245 ZBTB12Q9Y330 459 aaPredicted RBP8.23□□□□□ -1.09
RNU6-17P-201ENST00000384245 PRKAR2AP13861 404 aaKnown RBP8.18□□□□□ -1.1
RNU6-17P-201ENST00000384245 POTEIP0CG38 1075 aa8.16□□□□□ -1.1
RNU6-17P-201ENST00000384245 FBLN2P98095 1184 aa8.1□□□□□ -1.11
RNU6-17P-201ENST00000384245 MKRN4PQ13434 485 aaPredicted RBP8.09□□□□□ -1.11
RNU6-17P-201ENST00000384245 POTEMA6NI47 508 aa8.05□□□□□ -1.12
RNU6-17P-201ENST00000384245 POTEGQ6S5H5 508 aa8□□□□□ -1.13
RNU6-17P-201ENST00000384245 OTUD5Q96G74 571 aa7.97□□□□□ -1.13
RNU6-17P-201ENST00000384245 CLEC11AQ9Y240 323 aa7.97□□□□□ -1.13
RNU6-17P-201ENST00000384245 SPDYE1Q8NFV5 336 aaPredicted RBP7.96□□□□□ -1.14
RNU6-17P-201ENST00000384245 SPDYE2BA6NHP3 402 aa7.94□□□□□ -1.14
RNU6-17P-201ENST00000384245 SPDYE6P0CI01 402 aa7.94□□□□□ -1.14
RNU6-17P-201ENST00000384245 SPDYE2Q495Y8 402 aa7.94□□□□□ -1.14
RNU6-17P-201ENST00000384245 CHADLQ6NUI6 762 aa7.94□□□□□ -1.14
RNU6-17P-201ENST00000384245 PCDH10Q9P2E7 1040 aa7.92□□□□□ -1.14
RNU6-17P-201ENST00000384245 ZNF692Q9BU19 519 aaPredicted RBP7.91□□□□□ -1.14
RNU6-17P-201ENST00000384245 POTEB2H3BUK9 544 aa7.87□□□□□ -1.15
RNU6-17P-201ENST00000384245 CD44P16070 742 aaKnown RBP7.87□□□□□ -1.15
RNU6-17P-201ENST00000384245 CLCN6P51797 869 aa7.87□□□□□ -1.15
RNU6-17P-201ENST00000384245 DCBLD2Q96PD2 775 aa7.87□□□□□ -1.15
RNU6-17P-201ENST00000384245 SPDYE4A6NLX3 237 aa7.86□□□□□ -1.15
RNU6-17P-201ENST00000384245 SSUH2Q9Y2M2 353 aa7.85□□□□□ -1.15
RNU6-17P-201ENST00000384245 FKBP8Q14318 412 aa7.81□□□□□ -1.16
RNU6-17P-201ENST00000384245 PABPN1Q86U42 306 aaKnown RBP eCLIP7.81□□□□□ -1.16
RNU6-17P-201ENST00000384245 LCE2DQ5TA82 110 aaPredicted RBP7.78□□□□□ -1.16
RNU6-17P-201ENST00000384245 ZNF579Q8NAF0 562 aaKnown RBP7.75□□□□□ -1.17
RNU6-17P-201ENST00000384245 PRR29P0C7W0 189 aa7.73□□□□□ -1.17
RNU6-17P-201ENST00000384245 FARP1Q9Y4F1 1045 aaPredicted RBP7.73□□□□□ -1.17
RNU6-17P-201ENST00000384245 GALR2O43603 387 aaPredicted RBP7.7□□□□□ -1.18
RNU6-17P-201ENST00000384245 PROM2Q8N271 834 aa7.67□□□□□ -1.18
RNU6-17P-201ENST00000384245 POTEJP0CG39 1038 aa7.65□□□□□ -1.18
RNU6-17P-201ENST00000384245 PELP1Q8IZL8 1130 aaKnown RBP7.63□□□□□ -1.19
RNU6-17P-201ENST00000384245 ZRANB1Q9UGI0 708 aa7.63□□□□□ -1.19
RNU6-17P-201ENST00000384245 STAG3Q9UJ98 1225 aa7.61□□□□□ -1.19
RNU6-17P-201ENST00000384245 FAM163AQ96GL9 167 aaPredicted RBP7.59□□□□□ -1.19
RNU6-17P-201ENST00000384245 CDAN1Q8IWY9 1227 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 198.8 ms