RNA–Protein interactions for RNA: ENST00000384055.1

RNU6-224P-201, Transcript of RNA, U6 small nuclear 224, pseudogene, humanhuman

BASIC

Gene RNU6-224P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-224P-201ENST00000384055 AEBP2Q6ZN18 517 aaPredicted RBP22.61■■□□□ 1.21
RNU6-224P-201ENST00000384055 CHIC1Q5VXU3 224 aa22.34■■□□□ 1.17
RNU6-224P-201ENST00000384055 PHF23Q9BUL5 403 aaPredicted RBP19.66■□□□□ 0.74
RNU6-224P-201ENST00000384055 SENP3Q9H4L4 574 aaPredicted RBP19.17■□□□□ 0.66
RNU6-224P-201ENST00000384055 PLPPR3Q6T4P5 718 aa18.24■□□□□ 0.51
RNU6-224P-201ENST00000384055 FOXD1Q16676 465 aa17.74■□□□□ 0.43
RNU6-224P-201ENST00000384055 PPP6R1Q9UPN7 881 aa17.25■□□□□ 0.35
RNU6-224P-201ENST00000384055 ADRA2BP18089 450 aa17.23■□□□□ 0.35
RNU6-224P-201ENST00000384055 PIAS4Q8N2W9 510 aaPredicted RBP16.76■□□□□ 0.27
RNU6-224P-201ENST00000384055 MSH5O43196 834 aa16.29■□□□□ 0.2
RNU6-224P-201ENST00000384055 PPP4R3CPQ6ZMV5 832 aa16.1■□□□□ 0.17
RNU6-224P-201ENST00000384055 KCNA4P22459 653 aa15.97■□□□□ 0.15
RNU6-224P-201ENST00000384055 SCAF1Q9H7N4 1312 aaKnown RBP15.81■□□□□ 0.12
RNU6-224P-201ENST00000384055 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
RNU6-224P-201ENST00000384055 CNKSR2Q8WXI2 1034 aa15.61■□□□□ 0.09
RNU6-224P-201ENST00000384055 MAPK8IP2Q13387 824 aaPredicted RBP15.55■□□□□ 0.08
RNU6-224P-201ENST00000384055 NPM3O75607 178 aaKnown RBP15.51■□□□□ 0.07
RNU6-224P-201ENST00000384055 DMRT2Q9Y5R5 561 aa15.35■□□□□ 0.05
RNU6-224P-201ENST00000384055 SLC4A1APQ9BWU0 796 aaKnown RBP15.26■□□□□ 0.03
RNU6-224P-201ENST00000384055 RNF216Q9NWF9 866 aaPredicted RBP15.26■□□□□ 0.03
RNU6-224P-201ENST00000384055 HOXD11P31277 338 aaPredicted RBP15.15■□□□□ 0.02
RNU6-224P-201ENST00000384055 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
RNU6-224P-201ENST00000384055 EHMT2Q96KQ7 1210 aa15.04■□□□□ -0
RNU6-224P-201ENST00000384055 CSRNP3Q8WYN3 585 aa14.83□□□□□ -0.04
RNU6-224P-201ENST00000384055 ZBTB22O15209 634 aa14.71□□□□□ -0.05
RNU6-224P-201ENST00000384055 FOXD4L1Q9NU39 408 aa14.65□□□□□ -0.06
RNU6-224P-201ENST00000384055 SLC4A2P04920 1241 aa14.6□□□□□ -0.07
RNU6-224P-201ENST00000384055 DCAF8L1A6NGE4 600 aa14.56□□□□□ -0.08
RNU6-224P-201ENST00000384055 POTEDQ86YR6 584 aa14.38□□□□□ -0.11
RNU6-224P-201ENST00000384055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.36□□□□□ -0.11
RNU6-224P-201ENST00000384055 MYCNP04198 464 aaPredicted RBP14.34□□□□□ -0.11
RNU6-224P-201ENST00000384055 ATXN8OSP0DMR3 200 aa14.18□□□□□ -0.14
RNU6-224P-201ENST00000384055 U3KPZ7 1027 aaPredicted RBP14.18□□□□□ -0.14
RNU6-224P-201ENST00000384055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.11□□□□□ -0.15
RNU6-224P-201ENST00000384055 HNRNPUL2Q1KMD3 747 aaKnown RBP14.11□□□□□ -0.15
RNU6-224P-201ENST00000384055 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
RNU6-224P-201ENST00000384055 RNF39Q9H2S5 420 aa13.98□□□□□ -0.17
RNU6-224P-201ENST00000384055 APLP2Q06481 763 aa13.91□□□□□ -0.18
RNU6-224P-201ENST00000384055 ATF5Q9Y2D1 282 aaPredicted RBP13.91□□□□□ -0.18
RNU6-224P-201ENST00000384055 C1QBPQ07021 282 aaKnown RBP13.83□□□□□ -0.2
RNU6-224P-201ENST00000384055 ZNF219Q9P2Y4 722 aaPredicted RBP13.69□□□□□ -0.22
RNU6-224P-201ENST00000384055 SPINK5Q9NQ38 1064 aaPredicted RBP13.68□□□□□ -0.22
RNU6-224P-201ENST00000384055 CAPN15O75808 1086 aa13.6□□□□□ -0.23
RNU6-224P-201ENST00000384055 TRHP20396 242 aaPredicted RBP13.6□□□□□ -0.23
RNU6-224P-201ENST00000384055 POLA2Q14181 598 aa13.46□□□□□ -0.25
RNU6-224P-201ENST00000384055 CACNB1Q02641 598 aaPredicted RBP13.39□□□□□ -0.27
RNU6-224P-201ENST00000384055 DSG3P32926 999 aa13.37□□□□□ -0.27
RNU6-224P-201ENST00000384055 ABCB7O75027 752 aa13.36□□□□□ -0.27
RNU6-224P-201ENST00000384055 FKBP8Q14318 412 aa13.35□□□□□ -0.27
RNU6-224P-201ENST00000384055 MKRN4PQ13434 485 aaPredicted RBP13.34□□□□□ -0.27
RNU6-224P-201ENST00000384055 FBLN2P98095 1184 aa13.32□□□□□ -0.28
RNU6-224P-201ENST00000384055 ZBTB12Q9Y330 459 aaPredicted RBP13.3□□□□□ -0.28
RNU6-224P-201ENST00000384055 SPDYE4A6NLX3 237 aa13.14□□□□□ -0.31
RNU6-224P-201ENST00000384055 PROM2Q8N271 834 aa13.03□□□□□ -0.32
RNU6-224P-201ENST00000384055 OSCARQ8IYS5 282 aa12.98□□□□□ -0.33
RNU6-224P-201ENST00000384055 SPDYE2BA6NHP3 402 aa12.96□□□□□ -0.33
RNU6-224P-201ENST00000384055 SPDYE6P0CI01 402 aa12.96□□□□□ -0.33
RNU6-224P-201ENST00000384055 SPDYE2Q495Y8 402 aa12.96□□□□□ -0.33
RNU6-224P-201ENST00000384055 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
RNU6-224P-201ENST00000384055 SSUH2Q9Y2M2 353 aa12.9□□□□□ -0.34
RNU6-224P-201ENST00000384055 FBXO3Q9UK99 471 aa12.87□□□□□ -0.35
RNU6-224P-201ENST00000384055 RBM42Q9BTD8 480 aaKnown RBP12.75□□□□□ -0.37
RNU6-224P-201ENST00000384055 PABPN1Q86U42 306 aaKnown RBP eCLIP12.74□□□□□ -0.37
RNU6-224P-201ENST00000384055 VASPP50552 380 aaPredicted RBP12.67□□□□□ -0.38
RNU6-224P-201ENST00000384055 AKT1S1Q96B36 256 aa12.65□□□□□ -0.38
RNU6-224P-201ENST00000384055 AMER1Q5JTC6 1135 aaPredicted RBP12.64□□□□□ -0.39
RNU6-224P-201ENST00000384055 STAG3Q9UJ98 1225 aa12.64□□□□□ -0.39
RNU6-224P-201ENST00000384055 RTN4Q9NQC3 1192 aaKnown RBP12.57□□□□□ -0.4
RNU6-224P-201ENST00000384055 SPDYE1Q8NFV5 336 aaPredicted RBP12.51□□□□□ -0.41
RNU6-224P-201ENST00000384055 IFNLR1Q8IU57 520 aaPredicted RBP12.5□□□□□ -0.41
RNU6-224P-201ENST00000384055 REM2Q8IYK8 340 aaPredicted RBP12.5□□□□□ -0.41
RNU6-224P-201ENST00000384055 PLCD3Q8N3E9 789 aa12.42□□□□□ -0.42
RNU6-224P-201ENST00000384055 MIER1Q8N108 512 aa12.41□□□□□ -0.42
RNU6-224P-201ENST00000384055 CLEC11AQ9Y240 323 aa12.37□□□□□ -0.43
RNU6-224P-201ENST00000384055 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
RNU6-224P-201ENST00000384055 KLHL34Q8N239 644 aa12.35□□□□□ -0.43
RNU6-224P-201ENST00000384055 PLEKHG5O94827 1062 aa12.34□□□□□ -0.43
RNU6-224P-201ENST00000384055 PRR29P0C7W0 189 aa12.33□□□□□ -0.44
RNU6-224P-201ENST00000384055 SPOCK2Q92563 424 aa12.33□□□□□ -0.44
RNU6-224P-201ENST00000384055 ZBTB47Q9UFB7 747 aaPredicted RBP12.31□□□□□ -0.44
RNU6-224P-201ENST00000384055 CREBZFQ9NS37 354 aa12.26□□□□□ -0.45
RNU6-224P-201ENST00000384055 PKD2Q13563 968 aa12.19□□□□□ -0.46
RNU6-224P-201ENST00000384055 MNX1P50219 401 aaPredicted RBP12.18□□□□□ -0.46
RNU6-224P-201ENST00000384055 NUBP1P53384 320 aa12.12□□□□□ -0.47
RNU6-224P-201ENST00000384055 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.47
RNU6-224P-201ENST00000384055 CHRDL2Q6WN34 429 aa12.09□□□□□ -0.47
RNU6-224P-201ENST00000384055 NPM1P06748 294 aaKnown RBP eCLIP12.06□□□□□ -0.48
RNU6-224P-201ENST00000384055 CHADLQ6NUI6 762 aa12.05□□□□□ -0.48
RNU6-224P-201ENST00000384055 CIZ1Q9ULV3 898 aaPredicted RBP12.05□□□□□ -0.48
RNU6-224P-201ENST00000384055 ECM2O94769 699 aaPredicted RBP12.04□□□□□ -0.48
RNU6-224P-201ENST00000384055 GSE1Q14687 1217 aa12.04□□□□□ -0.48
RNU6-224P-201ENST00000384055 PRKAR2AP13861 404 aaKnown RBP12.03□□□□□ -0.48
RNU6-224P-201ENST00000384055 TRIM41Q8WV44 630 aa12.03□□□□□ -0.48
RNU6-224P-201ENST00000384055 FARP1Q9Y4F1 1045 aaPredicted RBP12.01□□□□□ -0.49
RNU6-224P-201ENST00000384055 PIP4P2Q8N4L2 257 aa12□□□□□ -0.49
RNU6-224P-201ENST00000384055 FAM212AQ96EL1 285 aa11.99□□□□□ -0.49
RNU6-224P-201ENST00000384055 DCAF8Q5TAQ9 597 aa11.98□□□□□ -0.49
RNU6-224P-201ENST00000384055 RASEFQ8IZ41 740 aa11.98□□□□□ -0.49
RNU6-224P-201ENST00000384055 RGL2O15211 777 aa11.93□□□□□ -0.5
RNU6-224P-201ENST00000384055 CHRM1P11229 460 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms