RNA–Protein interactions for RNA: ENST00000383960.1

RNU1-109P-201, Transcript of RNA, U1 small nuclear 109, pseudogene, humanhuman

BASIC

Gene RNU1-109P, Length 147 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-109P-201ENST00000383960 AEBP2Q6ZN18 517 aaPredicted RBP7.69□□□□□ -1.18
RNU1-109P-201ENST00000383960 CHIC1Q5VXU3 224 aa7.6□□□□□ -1.19
RNU1-109P-201ENST00000383960 PHF23Q9BUL5 403 aaPredicted RBP6.74□□□□□ -1.33
RNU1-109P-201ENST00000383960 SENP3Q9H4L4 574 aaPredicted RBP6.46□□□□□ -1.38
RNU1-109P-201ENST00000383960 PLPPR3Q6T4P5 718 aa6.2□□□□□ -1.42
RNU1-109P-201ENST00000383960 FOXD1Q16676 465 aa6□□□□□ -1.45
RNU1-109P-201ENST00000383960 PPP6R1Q9UPN7 881 aa5.89□□□□□ -1.47
RNU1-109P-201ENST00000383960 ADRA2BP18089 450 aa5.86□□□□□ -1.47
RNU1-109P-201ENST00000383960 PIAS4Q8N2W9 510 aaPredicted RBP5.64□□□□□ -1.51
RNU1-109P-201ENST00000383960 KCNA4P22459 653 aa5.5□□□□□ -1.53
RNU1-109P-201ENST00000383960 PPP4R3CPQ6ZMV5 832 aa5.47□□□□□ -1.53
RNU1-109P-201ENST00000383960 MSH5O43196 834 aa5.46□□□□□ -1.54
RNU1-109P-201ENST00000383960 NCBP3Q53F19 620 aaKnown RBP5.34□□□□□ -1.55
RNU1-109P-201ENST00000383960 SLC24A1O60721 1099 aa5.33□□□□□ -1.56
RNU1-109P-201ENST00000383960 SCAF1Q9H7N4 1312 aaKnown RBP5.31□□□□□ -1.56
RNU1-109P-201ENST00000383960 NPM3O75607 178 aaKnown RBP5.31□□□□□ -1.56
RNU1-109P-201ENST00000383960 CNKSR2Q8WXI2 1034 aa5.31□□□□□ -1.56
RNU1-109P-201ENST00000383960 MAPK8IP2Q13387 824 aaPredicted RBP5.29□□□□□ -1.56
RNU1-109P-201ENST00000383960 SLC4A1APQ9BWU0 796 aaKnown RBP5.22□□□□□ -1.57
RNU1-109P-201ENST00000383960 DNAJC5BQ9UF47 199 aa5.22□□□□□ -1.57
RNU1-109P-201ENST00000383960 DMRT2Q9Y5R5 561 aa5.2□□□□□ -1.58
RNU1-109P-201ENST00000383960 EHMT2Q96KQ7 1210 aa5.18□□□□□ -1.58
RNU1-109P-201ENST00000383960 RNF216Q9NWF9 866 aaPredicted RBP5.18□□□□□ -1.58
RNU1-109P-201ENST00000383960 MYT1Q01538 1121 aa5.16□□□□□ -1.58
RNU1-109P-201ENST00000383960 HOXD11P31277 338 aaPredicted RBP5.15□□□□□ -1.59
RNU1-109P-201ENST00000383960 CSRNP3Q8WYN3 585 aa5.14□□□□□ -1.59
RNU1-109P-201ENST00000383960 TTBK1Q5TCY1 1321 aaPredicted RBP5.09□□□□□ -1.59
RNU1-109P-201ENST00000383960 ZBTB22O15209 634 aa5.09□□□□□ -1.59
RNU1-109P-201ENST00000383960 PELP1Q8IZL8 1130 aaKnown RBP5.04□□□□□ -1.6
RNU1-109P-201ENST00000383960 SLC4A2P04920 1241 aa5.01□□□□□ -1.61
RNU1-109P-201ENST00000383960 FOXD4L1Q9NU39 408 aa5.01□□□□□ -1.61
RNU1-109P-201ENST00000383960 DAXXQ9UER7 740 aaPredicted RBP4.95□□□□□ -1.62
RNU1-109P-201ENST00000383960 ERICH6Q7L0X2 663 aa4.89□□□□□ -1.63
RNU1-109P-201ENST00000383960 MYCNP04198 464 aaPredicted RBP4.88□□□□□ -1.63
RNU1-109P-201ENST00000383960 DCAF8L1A6NGE4 600 aa4.86□□□□□ -1.63
RNU1-109P-201ENST00000383960 ATXN8OSP0DMR3 200 aa4.86□□□□□ -1.63
RNU1-109P-201ENST00000383960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.83□□□□□ -1.64
RNU1-109P-201ENST00000383960 U3KPZ7 1027 aaPredicted RBP4.82□□□□□ -1.64
RNU1-109P-201ENST00000383960 APLP2Q06481 763 aa4.81□□□□□ -1.64
RNU1-109P-201ENST00000383960 POTEDQ86YR6 584 aa4.78□□□□□ -1.64
RNU1-109P-201ENST00000383960 ATF5Q9Y2D1 282 aaPredicted RBP4.77□□□□□ -1.65
RNU1-109P-201ENST00000383960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.76□□□□□ -1.65
RNU1-109P-201ENST00000383960 HNRNPUL2Q1KMD3 747 aaKnown RBP4.76□□□□□ -1.65
RNU1-109P-201ENST00000383960 PRKCSHP14314 528 aaPredicted RBP4.75□□□□□ -1.65
RNU1-109P-201ENST00000383960 SAMD1Q6SPF0 538 aaPredicted RBP4.75□□□□□ -1.65
RNU1-109P-201ENST00000383960 RNF39Q9H2S5 420 aa4.72□□□□□ -1.65
RNU1-109P-201ENST00000383960 C1QBPQ07021 282 aaKnown RBP4.66□□□□□ -1.66
RNU1-109P-201ENST00000383960 ZNF219Q9P2Y4 722 aaPredicted RBP4.66□□□□□ -1.66
RNU1-109P-201ENST00000383960 ARXQ96QS3 562 aa4.64□□□□□ -1.67
RNU1-109P-201ENST00000383960 SPINK5Q9NQ38 1064 aaPredicted RBP4.64□□□□□ -1.67
RNU1-109P-201ENST00000383960 RTN4Q9NQC3 1192 aaKnown RBP4.64□□□□□ -1.67
RNU1-109P-201ENST00000383960 RANGAP1P46060 587 aaPredicted RBP4.63□□□□□ -1.67
RNU1-109P-201ENST00000383960 AMER1Q5JTC6 1135 aaPredicted RBP4.63□□□□□ -1.67
RNU1-109P-201ENST00000383960 FKBP8Q14318 412 aa4.59□□□□□ -1.67
RNU1-109P-201ENST00000383960 TRHP20396 242 aaPredicted RBP4.58□□□□□ -1.68
RNU1-109P-201ENST00000383960 MKRN4PQ13434 485 aaPredicted RBP4.58□□□□□ -1.68
RNU1-109P-201ENST00000383960 CAPN15O75808 1086 aa4.56□□□□□ -1.68
RNU1-109P-201ENST00000383960 POLA2Q14181 598 aa4.56□□□□□ -1.68
RNU1-109P-201ENST00000383960 EIF5BO60841 1220 aaKnown RBP4.55□□□□□ -1.68
RNU1-109P-201ENST00000383960 DSG3P32926 999 aa4.53□□□□□ -1.68
RNU1-109P-201ENST00000383960 PROM2Q8N271 834 aa4.51□□□□□ -1.69
RNU1-109P-201ENST00000383960 ABCB7O75027 752 aa4.5□□□□□ -1.69
RNU1-109P-201ENST00000383960 HOMEZQ8IX15 550 aa4.5□□□□□ -1.69
RNU1-109P-201ENST00000383960 FBLN2P98095 1184 aa4.49□□□□□ -1.69
RNU1-109P-201ENST00000383960 SPDYE4A6NLX3 237 aa4.48□□□□□ -1.69
RNU1-109P-201ENST00000383960 ZBTB12Q9Y330 459 aaPredicted RBP4.48□□□□□ -1.69
RNU1-109P-201ENST00000383960 TIMELESSQ9UNS1 1208 aa4.46□□□□□ -1.7
RNU1-109P-201ENST00000383960 CACNB1Q02641 598 aaPredicted RBP4.45□□□□□ -1.7
RNU1-109P-201ENST00000383960 TULP1O00294 542 aaPredicted RBP4.41□□□□□ -1.7
RNU1-109P-201ENST00000383960 SSUH2Q9Y2M2 353 aa4.41□□□□□ -1.7
RNU1-109P-201ENST00000383960 OSCARQ8IYS5 282 aa4.4□□□□□ -1.71
RNU1-109P-201ENST00000383960 SPDYE2BA6NHP3 402 aa4.39□□□□□ -1.71
RNU1-109P-201ENST00000383960 SPDYE6P0CI01 402 aa4.39□□□□□ -1.71
RNU1-109P-201ENST00000383960 SPDYE2Q495Y8 402 aa4.39□□□□□ -1.71
RNU1-109P-201ENST00000383960 FBXO3Q9UK99 471 aa4.39□□□□□ -1.71
RNU1-109P-201ENST00000383960 TAOK2Q9UL54 1235 aa4.39□□□□□ -1.71
RNU1-109P-201ENST00000383960 BCANQ96GW7 911 aa4.38□□□□□ -1.71
RNU1-109P-201ENST00000383960 BCL11AQ9H165 835 aa4.38□□□□□ -1.71
RNU1-109P-201ENST00000383960 ZNF692Q9BU19 519 aaPredicted RBP4.37□□□□□ -1.71
RNU1-109P-201ENST00000383960 PODXL2Q9NZ53 605 aa4.37□□□□□ -1.71
RNU1-109P-201ENST00000383960 KLHL34Q8N239 644 aa4.36□□□□□ -1.71
RNU1-109P-201ENST00000383960 VASPP50552 380 aaPredicted RBP4.35□□□□□ -1.71
RNU1-109P-201ENST00000383960 PABPN1Q86U42 306 aaKnown RBP eCLIP4.32□□□□□ -1.72
RNU1-109P-201ENST00000383960 IFNLR1Q8IU57 520 aaPredicted RBP4.32□□□□□ -1.72
RNU1-109P-201ENST00000383960 TPRNQ4KMQ1 711 aa4.31□□□□□ -1.72
RNU1-109P-201ENST00000383960 NPM2Q86SE8 214 aaKnown RBP4.3□□□□□ -1.72
RNU1-109P-201ENST00000383960 STAG3Q9UJ98 1225 aa4.3□□□□□ -1.72
RNU1-109P-201ENST00000383960 GTF3C3Q9Y5Q9 886 aa4.3□□□□□ -1.72
RNU1-109P-201ENST00000383960 PLEKHG5O94827 1062 aa4.27□□□□□ -1.73
RNU1-109P-201ENST00000383960 DCAF8L2P0C7V8 631 aa4.27□□□□□ -1.73
RNU1-109P-201ENST00000383960 AKT1S1Q96B36 256 aa4.27□□□□□ -1.73
RNU1-109P-201ENST00000383960 RBM42Q9BTD8 480 aaKnown RBP4.26□□□□□ -1.73
RNU1-109P-201ENST00000383960 C14orf37Q86TY3 774 aa4.24□□□□□ -1.73
RNU1-109P-201ENST00000383960 FAM9AQ8IZU1 332 aaPredicted RBP4.24□□□□□ -1.73
RNU1-109P-201ENST00000383960 PKD2Q13563 968 aa4.23□□□□□ -1.73
RNU1-109P-201ENST00000383960 REM2Q8IYK8 340 aaPredicted RBP4.23□□□□□ -1.73
RNU1-109P-201ENST00000383960 PLCB2Q00722 1185 aa4.22□□□□□ -1.73
RNU1-109P-201ENST00000383960 SPDYE1Q8NFV5 336 aaPredicted RBP4.22□□□□□ -1.73
RNU1-109P-201ENST00000383960 SPOCK2Q92563 424 aa4.22□□□□□ -1.73
RNU1-109P-201ENST00000383960 PDIA4P13667 645 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms