RNA–Protein interactions for RNA: ENST00000383862.1

RNU6-354P-201, Transcript of RNA, U6 small nuclear 354, pseudogene, humanhuman

BASIC

Gene RNU6-354P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-354P-201ENST00000383862 AEBP2Q6ZN18 517 aaPredicted RBP23.61■■□□□ 1.37
RNU6-354P-201ENST00000383862 CHIC1Q5VXU3 224 aa23.37■■□□□ 1.33
RNU6-354P-201ENST00000383862 PHF23Q9BUL5 403 aaPredicted RBP20.58■□□□□ 0.89
RNU6-354P-201ENST00000383862 SENP3Q9H4L4 574 aaPredicted RBP20■□□□□ 0.79
RNU6-354P-201ENST00000383862 PLPPR3Q6T4P5 718 aa19.12■□□□□ 0.65
RNU6-354P-201ENST00000383862 FOXD1Q16676 465 aa18.53■□□□□ 0.56
RNU6-354P-201ENST00000383862 ADRA2BP18089 450 aa18.09■□□□□ 0.49
RNU6-354P-201ENST00000383862 PPP6R1Q9UPN7 881 aa18.06■□□□□ 0.48
RNU6-354P-201ENST00000383862 PIAS4Q8N2W9 510 aaPredicted RBP17.57■□□□□ 0.4
RNU6-354P-201ENST00000383862 MSH5O43196 834 aa16.96■□□□□ 0.31
RNU6-354P-201ENST00000383862 PPP4R3CPQ6ZMV5 832 aa16.9■□□□□ 0.3
RNU6-354P-201ENST00000383862 KCNA4P22459 653 aa16.86■□□□□ 0.29
RNU6-354P-201ENST00000383862 NCBP3Q53F19 620 aaKnown RBP16.55■□□□□ 0.24
RNU6-354P-201ENST00000383862 SCAF1Q9H7N4 1312 aaKnown RBP16.54■□□□□ 0.24
RNU6-354P-201ENST00000383862 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
RNU6-354P-201ENST00000383862 MAPK8IP2Q13387 824 aaPredicted RBP16.32■□□□□ 0.2
RNU6-354P-201ENST00000383862 NPM3O75607 178 aaKnown RBP16.3■□□□□ 0.2
RNU6-354P-201ENST00000383862 SLC4A1APQ9BWU0 796 aaKnown RBP16.12■□□□□ 0.17
RNU6-354P-201ENST00000383862 EHMT2Q96KQ7 1210 aa16.04■□□□□ 0.16
RNU6-354P-201ENST00000383862 DMRT2Q9Y5R5 561 aa16■□□□□ 0.15
RNU6-354P-201ENST00000383862 RNF216Q9NWF9 866 aaPredicted RBP15.95■□□□□ 0.14
RNU6-354P-201ENST00000383862 HOXD11P31277 338 aaPredicted RBP15.79■□□□□ 0.12
RNU6-354P-201ENST00000383862 DNAJC5BQ9UF47 199 aa15.71■□□□□ 0.11
RNU6-354P-201ENST00000383862 CSRNP3Q8WYN3 585 aa15.67■□□□□ 0.1
RNU6-354P-201ENST00000383862 ZBTB22O15209 634 aa15.5■□□□□ 0.07
RNU6-354P-201ENST00000383862 FOXD4L1Q9NU39 408 aa15.43■□□□□ 0.06
RNU6-354P-201ENST00000383862 DCAF8L1A6NGE4 600 aa15.37■□□□□ 0.05
RNU6-354P-201ENST00000383862 SLC4A2P04920 1241 aa15.3■□□□□ 0.04
RNU6-354P-201ENST00000383862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.1■□□□□ 0.01
RNU6-354P-201ENST00000383862 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
RNU6-354P-201ENST00000383862 POTEDQ86YR6 584 aa14.91□□□□□ -0.02
RNU6-354P-201ENST00000383862 U3KPZ7 1027 aaPredicted RBP14.86□□□□□ -0.03
RNU6-354P-201ENST00000383862 ATXN8OSP0DMR3 200 aa14.83□□□□□ -0.04
RNU6-354P-201ENST00000383862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.78□□□□□ -0.04
RNU6-354P-201ENST00000383862 HNRNPUL2Q1KMD3 747 aaKnown RBP14.78□□□□□ -0.04
RNU6-354P-201ENST00000383862 SAMD1Q6SPF0 538 aaPredicted RBP14.74□□□□□ -0.05
RNU6-354P-201ENST00000383862 ATF5Q9Y2D1 282 aaPredicted RBP14.63□□□□□ -0.07
RNU6-354P-201ENST00000383862 APLP2Q06481 763 aa14.56□□□□□ -0.08
RNU6-354P-201ENST00000383862 RNF39Q9H2S5 420 aa14.55□□□□□ -0.08
RNU6-354P-201ENST00000383862 C1QBPQ07021 282 aaKnown RBP14.4□□□□□ -0.1
RNU6-354P-201ENST00000383862 ZNF219Q9P2Y4 722 aaPredicted RBP14.37□□□□□ -0.11
RNU6-354P-201ENST00000383862 SPINK5Q9NQ38 1064 aaPredicted RBP14.36□□□□□ -0.11
RNU6-354P-201ENST00000383862 TRHP20396 242 aaPredicted RBP14.33□□□□□ -0.12
RNU6-354P-201ENST00000383862 CAPN15O75808 1086 aa14.32□□□□□ -0.12
RNU6-354P-201ENST00000383862 FKBP8Q14318 412 aa14.18□□□□□ -0.14
RNU6-354P-201ENST00000383862 POLA2Q14181 598 aa14.14□□□□□ -0.15
RNU6-354P-201ENST00000383862 ABCB7O75027 752 aa14.08□□□□□ -0.16
RNU6-354P-201ENST00000383862 FBLN2P98095 1184 aa14.03□□□□□ -0.16
RNU6-354P-201ENST00000383862 MKRN4PQ13434 485 aaPredicted RBP14□□□□□ -0.17
RNU6-354P-201ENST00000383862 CACNB1Q02641 598 aaPredicted RBP13.99□□□□□ -0.17
RNU6-354P-201ENST00000383862 DSG3P32926 999 aa13.96□□□□□ -0.17
RNU6-354P-201ENST00000383862 ZBTB12Q9Y330 459 aaPredicted RBP13.92□□□□□ -0.18
RNU6-354P-201ENST00000383862 SPDYE4A6NLX3 237 aa13.86□□□□□ -0.19
RNU6-354P-201ENST00000383862 OSCARQ8IYS5 282 aa13.65□□□□□ -0.22
RNU6-354P-201ENST00000383862 PROM2Q8N271 834 aa13.62□□□□□ -0.23
RNU6-354P-201ENST00000383862 ZNF692Q9BU19 519 aaPredicted RBP13.58□□□□□ -0.24
RNU6-354P-201ENST00000383862 FBXO3Q9UK99 471 aa13.58□□□□□ -0.24
RNU6-354P-201ENST00000383862 SPDYE2BA6NHP3 402 aa13.57□□□□□ -0.24
RNU6-354P-201ENST00000383862 SPDYE6P0CI01 402 aa13.57□□□□□ -0.24
RNU6-354P-201ENST00000383862 SPDYE2Q495Y8 402 aa13.57□□□□□ -0.24
RNU6-354P-201ENST00000383862 SSUH2Q9Y2M2 353 aa13.48□□□□□ -0.25
RNU6-354P-201ENST00000383862 AMER1Q5JTC6 1135 aaPredicted RBP13.45□□□□□ -0.26
RNU6-354P-201ENST00000383862 RTN4Q9NQC3 1192 aaKnown RBP13.42□□□□□ -0.26
RNU6-354P-201ENST00000383862 PABPN1Q86U42 306 aaKnown RBP eCLIP13.41□□□□□ -0.26
RNU6-354P-201ENST00000383862 VASPP50552 380 aaPredicted RBP13.38□□□□□ -0.27
RNU6-354P-201ENST00000383862 RBM42Q9BTD8 480 aaKnown RBP13.32□□□□□ -0.28
RNU6-354P-201ENST00000383862 STAG3Q9UJ98 1225 aa13.27□□□□□ -0.29
RNU6-354P-201ENST00000383862 IFNLR1Q8IU57 520 aaPredicted RBP13.21□□□□□ -0.29
RNU6-354P-201ENST00000383862 AKT1S1Q96B36 256 aa13.21□□□□□ -0.29
RNU6-354P-201ENST00000383862 PLCD3Q8N3E9 789 aa13.15□□□□□ -0.3
RNU6-354P-201ENST00000383862 MIER1Q8N108 512 aa13.13□□□□□ -0.31
RNU6-354P-201ENST00000383862 KLHL34Q8N239 644 aa13.12□□□□□ -0.31
RNU6-354P-201ENST00000383862 SPDYE1Q8NFV5 336 aaPredicted RBP13.11□□□□□ -0.31
RNU6-354P-201ENST00000383862 REM2Q8IYK8 340 aaPredicted RBP13.08□□□□□ -0.32
RNU6-354P-201ENST00000383862 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
RNU6-354P-201ENST00000383862 PLEKHG5O94827 1062 aa13.04□□□□□ -0.32
RNU6-354P-201ENST00000383862 SPOCK2Q92563 424 aa13.03□□□□□ -0.32
RNU6-354P-201ENST00000383862 PRR29P0C7W0 189 aa12.97□□□□□ -0.33
RNU6-354P-201ENST00000383862 ZBTB47Q9UFB7 747 aaPredicted RBP12.96□□□□□ -0.33
RNU6-354P-201ENST00000383862 PITPNM1O00562 1244 aa12.93□□□□□ -0.34
RNU6-354P-201ENST00000383862 PKD2Q13563 968 aa12.89□□□□□ -0.35
RNU6-354P-201ENST00000383862 CREBZFQ9NS37 354 aa12.85□□□□□ -0.35
RNU6-354P-201ENST00000383862 CIZ1Q9ULV3 898 aaPredicted RBP12.8□□□□□ -0.36
RNU6-354P-201ENST00000383862 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
RNU6-354P-201ENST00000383862 DCAF8L2P0C7V8 631 aa12.79□□□□□ -0.36
RNU6-354P-201ENST00000383862 MNX1P50219 401 aaPredicted RBP12.74□□□□□ -0.37
RNU6-354P-201ENST00000383862 NUBP1P53384 320 aa12.72□□□□□ -0.37
RNU6-354P-201ENST00000383862 CHADLQ6NUI6 762 aa12.7□□□□□ -0.38
RNU6-354P-201ENST00000383862 GSE1Q14687 1217 aa12.69□□□□□ -0.38
RNU6-354P-201ENST00000383862 DCAF8Q5TAQ9 597 aa12.68□□□□□ -0.38
RNU6-354P-201ENST00000383862 NPM1P06748 294 aaKnown RBP eCLIP12.67□□□□□ -0.38
RNU6-354P-201ENST00000383862 RGL2O15211 777 aa12.64□□□□□ -0.39
RNU6-354P-201ENST00000383862 SLC24A1O60721 1099 aa12.64□□□□□ -0.39
RNU6-354P-201ENST00000383862 TRIM41Q8WV44 630 aa12.64□□□□□ -0.39
RNU6-354P-201ENST00000383862 FAM212AQ96EL1 285 aa12.64□□□□□ -0.39
RNU6-354P-201ENST00000383862 CHRDL2Q6WN34 429 aa12.63□□□□□ -0.39
RNU6-354P-201ENST00000383862 PRKAR2AP13861 404 aaKnown RBP12.62□□□□□ -0.39
RNU6-354P-201ENST00000383862 FXR2P51116 673 aaKnown RBP eCLIP12.61□□□□□ -0.39
RNU6-354P-201ENST00000383862 RASEFQ8IZ41 740 aa12.61□□□□□ -0.39
RNU6-354P-201ENST00000383862 FARP1Q9Y4F1 1045 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms