RNA–Protein interactions for RNA: ENST00000382543.3

AFAP1-203, Transcript of actin filament associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene AFAP1, Length 2,590 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1-203ENST00000382543 NISCHQ9Y2I1 1504 aa29.98■■■□□ 2.39
AFAP1-203ENST00000382543 SHROOM4Q9ULL8 1493 aa25.62■■□□□ 1.69
AFAP1-203ENST00000382543 CCDC180Q9P1Z9 1646 aa25.5■■□□□ 1.67
AFAP1-203ENST00000382543 ZCCHC6Q5VYS8 1495 aaKnown RBP25.3■■□□□ 1.64
AFAP1-203ENST00000382543 DCAF8L2P0C7V8 631 aa25.19■■□□□ 1.62
AFAP1-203ENST00000382543 SUPT5HO00267 1087 aaKnown RBP25■■□□□ 1.59
AFAP1-203ENST00000382543 DCAF1Q9Y4B6 1507 aa24.48■■□□□ 1.51
AFAP1-203ENST00000382543 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
AFAP1-203ENST00000382543 ABCC9O60706 1549 aa24.06■■□□□ 1.44
AFAP1-203ENST00000382543 SCRIBQ14160 1630 aa24.05■■□□□ 1.44
AFAP1-203ENST00000382543 MYO15BQ96JP2 1530 aa23.96■■□□□ 1.43
AFAP1-203ENST00000382543 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
AFAP1-203ENST00000382543 NACADO15069 1562 aa23.67■■□□□ 1.38
AFAP1-203ENST00000382543 CECR2Q9BXF3 1484 aa23.51■■□□□ 1.35
AFAP1-203ENST00000382543 LOC105371045A0A1W2PR82 267 aa23.47■■□□□ 1.35
AFAP1-203ENST00000382543 RB1CC1Q8TDY2 1594 aa23.42■■□□□ 1.34
AFAP1-203ENST00000382543 MROH2BQ7Z745 1585 aa23.36■■□□□ 1.33
AFAP1-203ENST00000382543 WIZO95785 1651 aa23.23■■□□□ 1.31
AFAP1-203ENST00000382543 TRIM41Q8WV44 630 aa23.22■■□□□ 1.31
AFAP1-203ENST00000382543 PCGF6Q9BYE7 350 aa23.16■■□□□ 1.3
AFAP1-203ENST00000382543 FAM9AQ8IZU1 332 aaPredicted RBP23.15■■□□□ 1.3
AFAP1-203ENST00000382543 EHMT2Q96KQ7 1210 aa23.06■■□□□ 1.28
AFAP1-203ENST00000382543 UNC13AQ9UPW8 1703 aa23.06■■□□□ 1.28
AFAP1-203ENST00000382543 PABPN1Q86U42 306 aaKnown RBP eCLIP23.04■■□□□ 1.28
AFAP1-203ENST00000382543 BAZ1AQ9NRL2 1556 aaPredicted RBP23.02■■□□□ 1.28
AFAP1-203ENST00000382543 SMARCA4P51532 1647 aa22.89■■□□□ 1.25
AFAP1-203ENST00000382543 HRCP23327 699 aa22.88■■□□□ 1.25
AFAP1-203ENST00000382543 BICRAQ9NZM4 1560 aa22.79■■□□□ 1.24
AFAP1-203ENST00000382543 TOP2AP11388 1531 aaKnown RBP22.78■■□□□ 1.24
AFAP1-203ENST00000382543 CCDC88BA6NC98 1476 aa22.75■■□□□ 1.23
AFAP1-203ENST00000382543 EIF4G1Q04637 1599 aaKnown RBP22.72■■□□□ 1.23
AFAP1-203ENST00000382543 SMARCA2P51531 1590 aa22.68■■□□□ 1.22
AFAP1-203ENST00000382543 ABCC8Q09428 1581 aa22.67■■□□□ 1.22
AFAP1-203ENST00000382543 TRIM26Q12899 539 aaPredicted RBP22.65■■□□□ 1.22
AFAP1-203ENST00000382543 PPARGC1BQ86YN6 1023 aaKnown RBP22.62■■□□□ 1.21
AFAP1-203ENST00000382543 SOGA1O94964 1423 aa22.41■■□□□ 1.18
AFAP1-203ENST00000382543 ATAD2BQ9ULI0 1458 aa22.38■■□□□ 1.17
AFAP1-203ENST00000382543 PEG3Q9GZU2 1588 aa22.38■■□□□ 1.17
AFAP1-203ENST00000382543 RUSC2Q8N2Y8 1516 aa22.33■■□□□ 1.17
AFAP1-203ENST00000382543 BAZ1BQ9UIG0 1483 aaKnown RBP22.32■■□□□ 1.16
AFAP1-203ENST00000382543 WRNQ14191 1432 aaPredicted RBP eCLIP22.25■■□□□ 1.15
AFAP1-203ENST00000382543 TTBK1Q5TCY1 1321 aaPredicted RBP22.22■■□□□ 1.15
AFAP1-203ENST00000382543 CSRNP3Q8WYN3 585 aa22.22■■□□□ 1.15
AFAP1-203ENST00000382543 UBTFP17480 764 aaKnown RBP22.18■■□□□ 1.14
AFAP1-203ENST00000382543 SYNJ1O43426 1573 aa22.17■■□□□ 1.14
AFAP1-203ENST00000382543 CEP162Q5TB80 1403 aa22.14■■□□□ 1.14
AFAP1-203ENST00000382543 EEA1Q15075 1411 aa22.07■■□□□ 1.12
AFAP1-203ENST00000382543 TNIKQ9UKE5 1360 aa22.06■■□□□ 1.12
AFAP1-203ENST00000382543 GOLGA3Q08378 1498 aa21.99■■□□□ 1.11
AFAP1-203ENST00000382543 RANGAP1P46060 587 aaPredicted RBP21.95■■□□□ 1.11
AFAP1-203ENST00000382543 ZEB1P37275 1124 aaPredicted RBP21.94■■□□□ 1.1
AFAP1-203ENST00000382543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.94■■□□□ 1.1
AFAP1-203ENST00000382543 NCAPD3P42695 1498 aa21.94■■□□□ 1.1
AFAP1-203ENST00000382543 HMGXB3Q12766 1538 aa21.88■■□□□ 1.09
AFAP1-203ENST00000382543 CEP164Q9UPV0 1460 aa21.88■■□□□ 1.09
AFAP1-203ENST00000382543 RAPGEF2Q9Y4G8 1499 aa21.85■■□□□ 1.09
AFAP1-203ENST00000382543 TOP2BQ02880 1626 aa21.85■■□□□ 1.09
AFAP1-203ENST00000382543 KIF21BO75037 1637 aa21.81■■□□□ 1.08
AFAP1-203ENST00000382543 CCER1Q8TC90 406 aaPredicted RBP21.81■■□□□ 1.08
AFAP1-203ENST00000382543 CLIP1P30622 1438 aa21.78■■□□□ 1.08
AFAP1-203ENST00000382543 CUX1P39880 1505 aa21.75■■□□□ 1.07
AFAP1-203ENST00000382543 BIVM-ERCC5R4GMW8 1640 aa21.74■■□□□ 1.07
AFAP1-203ENST00000382543 CFTRP13569 1480 aa21.72■■□□□ 1.07
AFAP1-203ENST00000382543 VPS8Q8N3P4 1428 aa21.61■■□□□ 1.05
AFAP1-203ENST00000382543 CC2D2AQ9P2K1 1620 aa21.59■■□□□ 1.05
AFAP1-203ENST00000382543 PRXQ9BXM0 1461 aa21.58■■□□□ 1.05
AFAP1-203ENST00000382543 HNRNPUL2Q1KMD3 747 aaKnown RBP21.58■■□□□ 1.05
AFAP1-203ENST00000382543 APLP2Q06481 763 aa21.57■■□□□ 1.04
AFAP1-203ENST00000382543 KIF27Q86VH2 1401 aa21.56■■□□□ 1.04
AFAP1-203ENST00000382543 CADPSQ9ULU8 1353 aa21.56■■□□□ 1.04
AFAP1-203ENST00000382543 ERICH3Q5RHP9 1530 aa21.49■■□□□ 1.03
AFAP1-203ENST00000382543 CUX2O14529 1486 aa21.46■■□□□ 1.03
AFAP1-203ENST00000382543 ARAP1Q96P48 1450 aa21.45■■□□□ 1.02
AFAP1-203ENST00000382543 PRDM2Q13029 1718 aa21.44■■□□□ 1.02
AFAP1-203ENST00000382543 FGD5Q6ZNL6 1462 aa21.41■■□□□ 1.02
AFAP1-203ENST00000382543 KANK4Q5T7N3 995 aaPredicted RBP21.4■■□□□ 1.02
AFAP1-203ENST00000382543 IGF1RP08069 1367 aa21.39■■□□□ 1.01
AFAP1-203ENST00000382543 NESP48681 1621 aa21.38■■□□□ 1.01
AFAP1-203ENST00000382543 FANCD2Q9BXW9 1451 aa21.37■■□□□ 1.01
AFAP1-203ENST00000382543 DNAJC5BQ9UF47 199 aa21.32■■□□□ 1
AFAP1-203ENST00000382543 ARHGAP35Q9NRY4 1499 aa21.31■■□□□ 1
AFAP1-203ENST00000382543 CARMIL1Q5VZK9 1371 aa21.29■■□□□ 1
AFAP1-203ENST00000382543 RAD54L2Q9Y4B4 1467 aa21.28■■□□□ 1
AFAP1-203ENST00000382543 P3H3Q8IVL6 736 aa21.23■□□□□ 0.99
AFAP1-203ENST00000382543 DIEXFQ68CQ4 756 aaKnown RBP21.2■□□□□ 0.98
AFAP1-203ENST00000382543 TOPBP1Q92547 1522 aa21.19■□□□□ 0.98
AFAP1-203ENST00000382543 POLA1P09884 1462 aaPredicted RBP21.18■□□□□ 0.98
AFAP1-203ENST00000382543 DNMBPQ6XZF7 1577 aa21.16■□□□□ 0.98
AFAP1-203ENST00000382543 ITGAEP38570 1179 aa21.16■□□□□ 0.98
AFAP1-203ENST00000382543 ATP1B4Q9UN42 357 aaPredicted RBP21.13■□□□□ 0.97
AFAP1-203ENST00000382543 ABCA10Q8WWZ4 1543 aa21.09■□□□□ 0.97
AFAP1-203ENST00000382543 URB2Q14146 1524 aaKnown RBP21.08■□□□□ 0.97
AFAP1-203ENST00000382543 ZNF316A6NFI3 1004 aaPredicted RBP21.08■□□□□ 0.97
AFAP1-203ENST00000382543 TDRD9Q8NDG6 1382 aaKnown RBP21.06■□□□□ 0.96
AFAP1-203ENST00000382543 RRBP1Q9P2E9 1410 aaKnown RBP21.04■□□□□ 0.96
AFAP1-203ENST00000382543 CCNB3Q8WWL7 1395 aa21.03■□□□□ 0.96
AFAP1-203ENST00000382543 FHOD3Q2V2M9 1422 aa21.03■□□□□ 0.96
AFAP1-203ENST00000382543 LAMC3Q9Y6N6 1575 aa21.02■□□□□ 0.96
AFAP1-203ENST00000382543 DHX57Q6P158 1386 aaKnown RBP21.01■□□□□ 0.95
AFAP1-203ENST00000382543 TIAM1Q13009 1591 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms