RNA–Protein interactions for RNA: ENST00000382361.7

FSCN1-201, Transcript of fascin actin-bundling protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FSCN1, Length 2,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-201ENST00000382361 NISCHQ9Y2I1 1504 aa35.2■■■■□ 3.23
FSCN1-201ENST00000382361 CCDC180Q9P1Z9 1646 aa30.01■■■□□ 2.39
FSCN1-201ENST00000382361 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
FSCN1-201ENST00000382361 ZCCHC6Q5VYS8 1495 aaKnown RBP29.84■■■□□ 2.37
FSCN1-201ENST00000382361 SUPT5HO00267 1087 aaKnown RBP29.3■■■□□ 2.28
FSCN1-201ENST00000382361 DCAF1Q9Y4B6 1507 aa28.97■■■□□ 2.23
FSCN1-201ENST00000382361 DCAF8L2P0C7V8 631 aa28.84■■■□□ 2.21
FSCN1-201ENST00000382361 MYO15BQ96JP2 1530 aa28.64■■■□□ 2.18
FSCN1-201ENST00000382361 CHIC1Q5VXU3 224 aa28.64■■■□□ 2.18
FSCN1-201ENST00000382361 ABCC9O60706 1549 aa28.22■■■□□ 2.11
FSCN1-201ENST00000382361 SCRIBQ14160 1630 aa28■■■□□ 2.07
FSCN1-201ENST00000382361 HRCP23327 699 aa27.94■■■□□ 2.06
FSCN1-201ENST00000382361 RSF1Q96T23 1441 aaPredicted RBP27.85■■■□□ 2.05
FSCN1-201ENST00000382361 PCGF6Q9BYE7 350 aa27.77■■■□□ 2.04
FSCN1-201ENST00000382361 LOC105371045A0A1W2PR82 267 aa27.71■■■□□ 2.03
FSCN1-201ENST00000382361 NACADO15069 1562 aa27.64■■■□□ 2.02
FSCN1-201ENST00000382361 RB1CC1Q8TDY2 1594 aa27.63■■■□□ 2.01
FSCN1-201ENST00000382361 CECR2Q9BXF3 1484 aa27.39■■□□□ 1.97
FSCN1-201ENST00000382361 MROH2BQ7Z745 1585 aa27.35■■□□□ 1.97
FSCN1-201ENST00000382361 TRIM41Q8WV44 630 aa27.34■■□□□ 1.97
FSCN1-201ENST00000382361 TRIM26Q12899 539 aaPredicted RBP27.3■■□□□ 1.96
FSCN1-201ENST00000382361 PPARGC1BQ86YN6 1023 aaKnown RBP27.25■■□□□ 1.95
FSCN1-201ENST00000382361 WIZO95785 1651 aa27.23■■□□□ 1.95
FSCN1-201ENST00000382361 BAZ1AQ9NRL2 1556 aaPredicted RBP27.14■■□□□ 1.93
FSCN1-201ENST00000382361 FAM9AQ8IZU1 332 aaPredicted RBP27.04■■□□□ 1.92
FSCN1-201ENST00000382361 EIF4G1Q04637 1599 aaKnown RBP27.03■■□□□ 1.92
FSCN1-201ENST00000382361 TOP2AP11388 1531 aaKnown RBP26.84■■□□□ 1.89
FSCN1-201ENST00000382361 UNC13AQ9UPW8 1703 aa26.84■■□□□ 1.89
FSCN1-201ENST00000382361 SMARCA4P51532 1647 aa26.82■■□□□ 1.88
FSCN1-201ENST00000382361 ZEB1P37275 1124 aaPredicted RBP26.76■■□□□ 1.87
FSCN1-201ENST00000382361 EHMT2Q96KQ7 1210 aa26.74■■□□□ 1.87
FSCN1-201ENST00000382361 SMARCA2P51531 1590 aa26.69■■□□□ 1.86
FSCN1-201ENST00000382361 CCDC88BA6NC98 1476 aa26.66■■□□□ 1.86
FSCN1-201ENST00000382361 ABCC8Q09428 1581 aa26.62■■□□□ 1.85
FSCN1-201ENST00000382361 BICRAQ9NZM4 1560 aa26.44■■□□□ 1.82
FSCN1-201ENST00000382361 WRNQ14191 1432 aaPredicted RBP eCLIP26.36■■□□□ 1.819e-8■■■■■ 29.9
FSCN1-201ENST00000382361 PEG3Q9GZU2 1588 aa26.36■■□□□ 1.81
FSCN1-201ENST00000382361 SOGA1O94964 1423 aa26.34■■□□□ 1.81
FSCN1-201ENST00000382361 EEA1Q15075 1411 aa26.31■■□□□ 1.8
FSCN1-201ENST00000382361 CEP162Q5TB80 1403 aa26.31■■□□□ 1.8
FSCN1-201ENST00000382361 TNIKQ9UKE5 1360 aa26.26■■□□□ 1.79
FSCN1-201ENST00000382361 RUSC2Q8N2Y8 1516 aa26.21■■□□□ 1.79
FSCN1-201ENST00000382361 PABPN1Q86U42 306 aaKnown RBP eCLIP26.21■■□□□ 1.79
FSCN1-201ENST00000382361 CSRNP3Q8WYN3 585 aa26.15■■□□□ 1.78
FSCN1-201ENST00000382361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.12■■□□□ 1.77
FSCN1-201ENST00000382361 GOLGA3Q08378 1498 aa26.12■■□□□ 1.77
FSCN1-201ENST00000382361 SYNJ1O43426 1573 aa26.08■■□□□ 1.77
FSCN1-201ENST00000382361 CCER1Q8TC90 406 aaPredicted RBP26.07■■□□□ 1.76
FSCN1-201ENST00000382361 ATAD2BQ9ULI0 1458 aa26.05■■□□□ 1.76
FSCN1-201ENST00000382361 KIF21BO75037 1637 aa26.01■■□□□ 1.75
FSCN1-201ENST00000382361 UBTFP17480 764 aaKnown RBP26■■□□□ 1.75
FSCN1-201ENST00000382361 BAZ1BQ9UIG0 1483 aaKnown RBP25.98■■□□□ 1.75
FSCN1-201ENST00000382361 CEP164Q9UPV0 1460 aa25.97■■□□□ 1.75
FSCN1-201ENST00000382361 TTBK1Q5TCY1 1321 aaPredicted RBP25.94■■□□□ 1.74
FSCN1-201ENST00000382361 TOP2BQ02880 1626 aa25.78■■□□□ 1.72
FSCN1-201ENST00000382361 CLIP1P30622 1438 aa25.78■■□□□ 1.72
FSCN1-201ENST00000382361 SCAF1Q9H7N4 1312 aaKnown RBP25.77■■□□□ 1.72
FSCN1-201ENST00000382361 RAPGEF2Q9Y4G8 1499 aa25.73■■□□□ 1.71
FSCN1-201ENST00000382361 BIVM-ERCC5R4GMW8 1640 aa25.73■■□□□ 1.71
FSCN1-201ENST00000382361 VPS8Q8N3P4 1428 aa25.72■■□□□ 1.71
FSCN1-201ENST00000382361 DIEXFQ68CQ4 756 aaKnown RBP25.63■■□□□ 1.69
FSCN1-201ENST00000382361 HMGXB3Q12766 1538 aa25.61■■□□□ 1.69
FSCN1-201ENST00000382361 ERICH3Q5RHP9 1530 aa25.57■■□□□ 1.68
FSCN1-201ENST00000382361 NCAPD3P42695 1498 aa25.54■■□□□ 1.68
FSCN1-201ENST00000382361 PRXQ9BXM0 1461 aa25.51■■□□□ 1.67
FSCN1-201ENST00000382361 ACIN1Q9UKV3 1341 aaKnown RBP25.51■■□□□ 1.67
FSCN1-201ENST00000382361 CUX1P39880 1505 aa25.47■■□□□ 1.67
FSCN1-201ENST00000382361 HNRNPUL2Q1KMD3 747 aaKnown RBP25.47■■□□□ 1.67
FSCN1-201ENST00000382361 ZNF316A6NFI3 1004 aaPredicted RBP25.44■■□□□ 1.66
FSCN1-201ENST00000382361 APLP2Q06481 763 aa25.44■■□□□ 1.66
FSCN1-201ENST00000382361 NEUROD1Q13562 356 aa25.44■■□□□ 1.66
FSCN1-201ENST00000382361 ARAP1Q96P48 1450 aa25.41■■□□□ 1.66
FSCN1-201ENST00000382361 CFTRP13569 1480 aa25.37■■□□□ 1.65
FSCN1-201ENST00000382361 RANGAP1P46060 587 aaPredicted RBP25.37■■□□□ 1.65
FSCN1-201ENST00000382361 PELP1Q8IZL8 1130 aaKnown RBP25.36■■□□□ 1.65
FSCN1-201ENST00000382361 CENPBP07199 599 aaPredicted RBP25.33■■□□□ 1.65
FSCN1-201ENST00000382361 KIF27Q86VH2 1401 aa25.33■■□□□ 1.65
FSCN1-201ENST00000382361 PRDM2Q13029 1718 aa25.32■■□□□ 1.64
FSCN1-201ENST00000382361 GTF3C3Q9Y5Q9 886 aa25.17■■□□□ 1.62
FSCN1-201ENST00000382361 ARHGAP35Q9NRY4 1499 aa25.16■■□□□ 1.62
FSCN1-201ENST00000382361 KANK4Q5T7N3 995 aaPredicted RBP25.16■■□□□ 1.62
FSCN1-201ENST00000382361 RRBP1Q9P2E9 1410 aaKnown RBP25.15■■□□□ 1.62
FSCN1-201ENST00000382361 CLSPNQ9HAW4 1339 aa25.14■■□□□ 1.62
FSCN1-201ENST00000382361 DHX57Q6P158 1386 aaKnown RBP25.13■■□□□ 1.61
FSCN1-201ENST00000382361 MIER1Q8N108 512 aa25.06■■□□□ 1.6
FSCN1-201ENST00000382361 CUX2O14529 1486 aa25.06■■□□□ 1.6
FSCN1-201ENST00000382361 IGF1RP08069 1367 aa25.02■■□□□ 1.6
FSCN1-201ENST00000382361 CADPSQ9ULU8 1353 aa25.01■■□□□ 1.59
FSCN1-201ENST00000382361 CCNB3Q8WWL7 1395 aa24.98■■□□□ 1.59
FSCN1-201ENST00000382361 FGD5Q6ZNL6 1462 aa24.98■■□□□ 1.59
FSCN1-201ENST00000382361 YTHDC1Q96MU7 727 aaKnown RBP24.96■■□□□ 1.59
FSCN1-201ENST00000382361 MAP3K1Q13233 1512 aa24.95■■□□□ 1.59
FSCN1-201ENST00000382361 TIAM1Q13009 1591 aa24.95■■□□□ 1.58
FSCN1-201ENST00000382361 CARMIL1Q5VZK9 1371 aa24.9■■□□□ 1.58
FSCN1-201ENST00000382361 CC2D2AQ9P2K1 1620 aa24.89■■□□□ 1.57
FSCN1-201ENST00000382361 CFAP43Q8NDM7 1665 aa24.82■■□□□ 1.56
FSCN1-201ENST00000382361 LRRC9Q6ZRR7 1453 aa24.81■■□□□ 1.56
FSCN1-201ENST00000382361 FANCD2Q9BXW9 1451 aa24.79■■□□□ 1.56
FSCN1-201ENST00000382361 PCF11O94913 1555 aaKnown RBP24.77■■□□□ 1.56
FSCN1-201ENST00000382361 FHAD1B1AJZ9 1412 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms