RNA–Protein interactions for RNA: ENST00000380702.6

PDE4A-203, Transcript of phosphodiesterase 4A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDE4A, Length 4,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-203ENST00000380702 NISCHQ9Y2I1 1504 aa28.1■■■□□ 2.09
PDE4A-203ENST00000380702 DCAF8L2P0C7V8 631 aa27.16■■□□□ 1.94
PDE4A-203ENST00000380702 SUPT5HO00267 1087 aaKnown RBP26.16■■□□□ 1.78
PDE4A-203ENST00000380702 SHROOM4Q9ULL8 1493 aa26.09■■□□□ 1.77
PDE4A-203ENST00000380702 EHMT2Q96KQ7 1210 aa24.86■■□□□ 1.57
PDE4A-203ENST00000380702 FAM9AQ8IZU1 332 aaPredicted RBP24.52■■□□□ 1.52
PDE4A-203ENST00000380702 PCGF6Q9BYE7 350 aa24.27■■□□□ 1.48
PDE4A-203ENST00000380702 TRIM41Q8WV44 630 aa24.23■■□□□ 1.47
PDE4A-203ENST00000380702 TTBK1Q5TCY1 1321 aaPredicted RBP23.98■■□□□ 1.43
PDE4A-203ENST00000380702 PELP1Q8IZL8 1130 aaKnown RBP23.97■■□□□ 1.43
PDE4A-203ENST00000380702 APLP2Q06481 763 aa23.95■■□□□ 1.42
PDE4A-203ENST00000380702 CHIC1Q5VXU3 224 aa23.91■■□□□ 1.42
PDE4A-203ENST00000380702 RANGAP1P46060 587 aaPredicted RBP23.75■■□□□ 1.39
PDE4A-203ENST00000380702 LOC105371045A0A1W2PR82 267 aa23.69■■□□□ 1.38
PDE4A-203ENST00000380702 UBTFP17480 764 aaKnown RBP23.67■■□□□ 1.38
PDE4A-203ENST00000380702 ABCC9O60706 1549 aa23.64■■□□□ 1.38
PDE4A-203ENST00000380702 ZEB1P37275 1124 aaPredicted RBP23.61■■□□□ 1.37
PDE4A-203ENST00000380702 PPARGC1BQ86YN6 1023 aaKnown RBP23.53■■□□□ 1.36
PDE4A-203ENST00000380702 CCER1Q8TC90 406 aaPredicted RBP23.48■■□□□ 1.35
PDE4A-203ENST00000380702 MYT1Q01538 1121 aa23.47■■□□□ 1.35
PDE4A-203ENST00000380702 CENPBP07199 599 aaPredicted RBP23.43■■□□□ 1.34
PDE4A-203ENST00000380702 TRIM26Q12899 539 aaPredicted RBP23.41■■□□□ 1.34
PDE4A-203ENST00000380702 ZCCHC6Q5VYS8 1495 aaKnown RBP23.39■■□□□ 1.33
PDE4A-203ENST00000380702 ATP1B4Q9UN42 357 aaPredicted RBP23.28■■□□□ 1.32
PDE4A-203ENST00000380702 PABPN1Q86U42 306 aaKnown RBP eCLIP23.28■■□□□ 1.32
PDE4A-203ENST00000380702 HRCP23327 699 aa23.27■■□□□ 1.32
PDE4A-203ENST00000380702 CCDC180Q9P1Z9 1646 aa23.16■■□□□ 1.3
PDE4A-203ENST00000380702 SCRIBQ14160 1630 aa22.95■■□□□ 1.26
PDE4A-203ENST00000380702 HNRNPUL2Q1KMD3 747 aaKnown RBP22.84■■□□□ 1.25
PDE4A-203ENST00000380702 ITGAEP38570 1179 aa22.79■■□□□ 1.24
PDE4A-203ENST00000380702 ERICH6Q7L0X2 663 aa22.79■■□□□ 1.24
PDE4A-203ENST00000380702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.76■■□□□ 1.23
PDE4A-203ENST00000380702 YTHDC1Q96MU7 727 aaKnown RBP22.7■■□□□ 1.23
PDE4A-203ENST00000380702 CSRNP3Q8WYN3 585 aa22.55■■□□□ 1.2
PDE4A-203ENST00000380702 NEFLP07196 543 aa22.54■■□□□ 1.2
PDE4A-203ENST00000380702 RSF1Q96T23 1441 aaPredicted RBP22.47■■□□□ 1.19
PDE4A-203ENST00000380702 MYO15BQ96JP2 1530 aa22.43■■□□□ 1.18
PDE4A-203ENST00000380702 DCAF1Q9Y4B6 1507 aa22.34■■□□□ 1.17
PDE4A-203ENST00000380702 DIEXFQ68CQ4 756 aaKnown RBP22.32■■□□□ 1.16
PDE4A-203ENST00000380702 FAM50AQ14320 339 aaKnown RBP22.3■■□□□ 1.16
PDE4A-203ENST00000380702 RB1CC1Q8TDY2 1594 aa22.3■■□□□ 1.16
PDE4A-203ENST00000380702 NACADO15069 1562 aa22.28■■□□□ 1.16
PDE4A-203ENST00000380702 P3H3Q8IVL6 736 aa22.16■■□□□ 1.14
PDE4A-203ENST00000380702 CECR2Q9BXF3 1484 aa22.12■■□□□ 1.13
PDE4A-203ENST00000380702 POLR3GLQ9BT43 218 aa22.07■■□□□ 1.12
PDE4A-203ENST00000380702 NEUROD1Q13562 356 aa22.06■■□□□ 1.12
PDE4A-203ENST00000380702 MYT1LQ9UL68 1186 aa22.01■■□□□ 1.11
PDE4A-203ENST00000380702 TRIM52Q96A61 297 aa21.98■■□□□ 1.11
PDE4A-203ENST00000380702 CNGB1Q14028 1251 aaPredicted RBP21.96■■□□□ 1.11
PDE4A-203ENST00000380702 ZNF316A6NFI3 1004 aaPredicted RBP21.96■■□□□ 1.11
PDE4A-203ENST00000380702 FBLN2P98095 1184 aa21.96■■□□□ 1.11
PDE4A-203ENST00000380702 BAZ1AQ9NRL2 1556 aaPredicted RBP21.91■■□□□ 1.1
PDE4A-203ENST00000380702 ARID3CA6NKF2 412 aa21.9■■□□□ 1.1
PDE4A-203ENST00000380702 WRNQ14191 1432 aaPredicted RBP eCLIP21.85■■□□□ 1.09
PDE4A-203ENST00000380702 GTF3C3Q9Y5Q9 886 aa21.85■■□□□ 1.09
PDE4A-203ENST00000380702 MROH2BQ7Z745 1585 aa21.84■■□□□ 1.09
PDE4A-203ENST00000380702 BAZ1BQ9UIG0 1483 aaKnown RBP21.82■■□□□ 1.08
PDE4A-203ENST00000380702 CLIP1P30622 1438 aa21.82■■□□□ 1.08
PDE4A-203ENST00000380702 CEP162Q5TB80 1403 aa21.8■■□□□ 1.08
PDE4A-203ENST00000380702 EEA1Q15075 1411 aa21.8■■□□□ 1.08
PDE4A-203ENST00000380702 ACIN1Q9UKV3 1341 aaKnown RBP21.74■■□□□ 1.07
PDE4A-203ENST00000380702 GOLGA3Q08378 1498 aa21.74■■□□□ 1.07
PDE4A-203ENST00000380702 TNIKQ9UKE5 1360 aa21.67■■□□□ 1.06
PDE4A-203ENST00000380702 ZNF326Q5BKZ1 582 aaKnown RBP21.66■■□□□ 1.06
PDE4A-203ENST00000380702 DAXXQ9UER7 740 aaPredicted RBP21.66■■□□□ 1.06
PDE4A-203ENST00000380702 SOGA1O94964 1423 aa21.62■■□□□ 1.05
PDE4A-203ENST00000380702 CCDC88BA6NC98 1476 aa21.61■■□□□ 1.05
PDE4A-203ENST00000380702 ANP32CO43423 234 aa21.61■■□□□ 1.05
PDE4A-203ENST00000380702 ZNF777Q9ULD5 760 aaPredicted RBP21.6■■□□□ 1.05
PDE4A-203ENST00000380702 CEP164Q9UPV0 1460 aa21.57■■□□□ 1.04
PDE4A-203ENST00000380702 CDK11AQ9UQ88 783 aaPredicted RBP21.56■■□□□ 1.04
PDE4A-203ENST00000380702 RTL5Q5HYW3 569 aaPredicted RBP21.55■■□□□ 1.04
PDE4A-203ENST00000380702 WIZO95785 1651 aa21.54■■□□□ 1.04
PDE4A-203ENST00000380702 ABCC8Q09428 1581 aa21.53■■□□□ 1.04
PDE4A-203ENST00000380702 KIF27Q86VH2 1401 aa21.52■■□□□ 1.04
PDE4A-203ENST00000380702 CLSPNQ9HAW4 1339 aa21.49■■□□□ 1.03
PDE4A-203ENST00000380702 CHIC2Q9UKJ5 165 aa21.47■■□□□ 1.03
PDE4A-203ENST00000380702 BCANQ96GW7 911 aa21.47■■□□□ 1.03
PDE4A-203ENST00000380702 MTUS2Q5JR59 1369 aa21.45■■□□□ 1.02
PDE4A-203ENST00000380702 TONSLQ96HA7 1378 aa21.44■■□□□ 1.02
PDE4A-203ENST00000380702 SLC4A1APQ9BWU0 796 aaKnown RBP21.43■■□□□ 1.02
PDE4A-203ENST00000380702 DDX10Q13206 875 aaKnown RBP21.38■■□□□ 1.01
PDE4A-203ENST00000380702 TOP2AP11388 1531 aaKnown RBP21.37■■□□□ 1.01
PDE4A-203ENST00000380702 CHMP7Q8WUX9 453 aaPredicted RBP21.32■■□□□ 1
PDE4A-203ENST00000380702 MIER1Q8N108 512 aa21.31■■□□□ 1
PDE4A-203ENST00000380702 SMARCA2P51531 1590 aa21.3■■□□□ 1
PDE4A-203ENST00000380702 CUX2O14529 1486 aa21.26■□□□□ 0.99
PDE4A-203ENST00000380702 HIRIP3Q9BW71 556 aaPredicted RBP21.24■□□□□ 0.99
PDE4A-203ENST00000380702 RRP7BPQ9NSQ0 103 aa21.24■□□□□ 0.99
PDE4A-203ENST00000380702 CARMIL1Q5VZK9 1371 aa21.23■□□□□ 0.99
PDE4A-203ENST00000380702 SMARCA4P51532 1647 aa21.23■□□□□ 0.99
PDE4A-203ENST00000380702 SCAF1Q9H7N4 1312 aaKnown RBP21.2■□□□□ 0.98
PDE4A-203ENST00000380702 VPS8Q8N3P4 1428 aa21.19■□□□□ 0.98
PDE4A-203ENST00000380702 ATAD2BQ9ULI0 1458 aa21.18■□□□□ 0.98
PDE4A-203ENST00000380702 TSPY4P0CV99 314 aa21.14■□□□□ 0.97
PDE4A-203ENST00000380702 TSPY10P0CW01 314 aa21.14■□□□□ 0.97
PDE4A-203ENST00000380702 KANK4Q5T7N3 995 aaPredicted RBP21.13■□□□□ 0.97
PDE4A-203ENST00000380702 RUSC2Q8N2Y8 1516 aa21.11■□□□□ 0.97
PDE4A-203ENST00000380702 CCNB3Q8WWL7 1395 aa21.11■□□□□ 0.97
PDE4A-203ENST00000380702 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms