RNA–Protein interactions for RNA: ENST00000380693.7

MSL3-206, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-206ENST00000380693 NISCHQ9Y2I1 1504 aa16.13■□□□□ 0.17
MSL3-206ENST00000380693 CCDC180Q9P1Z9 1646 aa13.81□□□□□ -0.2
MSL3-206ENST00000380693 ZCCHC6Q5VYS8 1495 aaKnown RBP13.65□□□□□ -0.22
MSL3-206ENST00000380693 SHROOM4Q9ULL8 1493 aa13.47□□□□□ -0.25
MSL3-206ENST00000380693 DCAF1Q9Y4B6 1507 aa13.35□□□□□ -0.27
MSL3-206ENST00000380693 SUPT5HO00267 1087 aaKnown RBP13.2□□□□□ -0.3
MSL3-206ENST00000380693 DCAF8L2P0C7V8 631 aa13.14□□□□□ -0.31
MSL3-206ENST00000380693 MYO15BQ96JP2 1530 aa13.02□□□□□ -0.33
MSL3-206ENST00000380693 AEBP2Q6ZN18 517 aaPredicted RBP12.96□□□□□ -0.33
MSL3-206ENST00000380693 CHIC1Q5VXU3 224 aa12.91□□□□□ -0.34
MSL3-206ENST00000380693 ABCC9O60706 1549 aa12.85□□□□□ -0.35
MSL3-206ENST00000380693 NACADO15069 1562 aa12.77□□□□□ -0.36
MSL3-206ENST00000380693 SCRIBQ14160 1630 aa12.77□□□□□ -0.36
MSL3-206ENST00000380693 RSF1Q96T23 1441 aaPredicted RBP12.71□□□□□ -0.37
MSL3-206ENST00000380693 RB1CC1Q8TDY2 1594 aa12.59□□□□□ -0.39
MSL3-206ENST00000380693 CECR2Q9BXF3 1484 aa12.51□□□□□ -0.41
MSL3-206ENST00000380693 MROH2BQ7Z745 1585 aa12.48□□□□□ -0.41
MSL3-206ENST00000380693 LOC105371045A0A1W2PR82 267 aa12.43□□□□□ -0.42
MSL3-206ENST00000380693 BAZ1AQ9NRL2 1556 aaPredicted RBP12.41□□□□□ -0.42
MSL3-206ENST00000380693 HRCP23327 699 aa12.41□□□□□ -0.42
MSL3-206ENST00000380693 WIZO95785 1651 aa12.39□□□□□ -0.43
MSL3-206ENST00000380693 TRIM41Q8WV44 630 aa12.38□□□□□ -0.43
MSL3-206ENST00000380693 PCGF6Q9BYE7 350 aa12.35□□□□□ -0.43
MSL3-206ENST00000380693 UNC13AQ9UPW8 1703 aa12.29□□□□□ -0.44
MSL3-206ENST00000380693 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
MSL3-206ENST00000380693 EIF4G1Q04637 1599 aaKnown RBP12.29□□□□□ -0.44
MSL3-206ENST00000380693 TOP2AP11388 1531 aaKnown RBP12.28□□□□□ -0.44
MSL3-206ENST00000380693 TRIM26Q12899 539 aaPredicted RBP12.25□□□□□ -0.45
MSL3-206ENST00000380693 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
MSL3-206ENST00000380693 BICRAQ9NZM4 1560 aa12.18□□□□□ -0.46
MSL3-206ENST00000380693 CCDC88BA6NC98 1476 aa12.17□□□□□ -0.46
MSL3-206ENST00000380693 FAM9AQ8IZU1 332 aaPredicted RBP12.15□□□□□ -0.46
MSL3-206ENST00000380693 PEG3Q9GZU2 1588 aa12.14□□□□□ -0.47
MSL3-206ENST00000380693 ABCC8Q09428 1581 aa12.05□□□□□ -0.48
MSL3-206ENST00000380693 PABPN1Q86U42 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
MSL3-206ENST00000380693 EEA1Q15075 1411 aa12.02□□□□□ -0.48
MSL3-206ENST00000380693 PPARGC1BQ86YN6 1023 aaKnown RBP12.01□□□□□ -0.49
MSL3-206ENST00000380693 ZEB1P37275 1124 aaPredicted RBP12□□□□□ -0.49
MSL3-206ENST00000380693 ATAD2BQ9ULI0 1458 aa11.99□□□□□ -0.49
MSL3-206ENST00000380693 WRNQ14191 1432 aaPredicted RBP eCLIP11.96□□□□□ -0.5
MSL3-206ENST00000380693 EHMT2Q96KQ7 1210 aa11.95□□□□□ -0.5
MSL3-206ENST00000380693 SOGA1O94964 1423 aa11.95□□□□□ -0.5
MSL3-206ENST00000380693 TNIKQ9UKE5 1360 aa11.93□□□□□ -0.5
MSL3-206ENST00000380693 BAZ1BQ9UIG0 1483 aaKnown RBP11.93□□□□□ -0.5
MSL3-206ENST00000380693 CSRNP3Q8WYN3 585 aa11.91□□□□□ -0.5
MSL3-206ENST00000380693 CEP162Q5TB80 1403 aa11.9□□□□□ -0.5
MSL3-206ENST00000380693 RUSC2Q8N2Y8 1516 aa11.86□□□□□ -0.51
MSL3-206ENST00000380693 GOLGA3Q08378 1498 aa11.86□□□□□ -0.51
MSL3-206ENST00000380693 SYNJ1O43426 1573 aa11.86□□□□□ -0.51
MSL3-206ENST00000380693 KIF21BO75037 1637 aa11.82□□□□□ -0.52
MSL3-206ENST00000380693 HMGXB3Q12766 1538 aa11.82□□□□□ -0.52
MSL3-206ENST00000380693 CEP164Q9UPV0 1460 aa11.81□□□□□ -0.52
MSL3-206ENST00000380693 NCAPD3P42695 1498 aa11.81□□□□□ -0.52
MSL3-206ENST00000380693 TOP2BQ02880 1626 aa11.78□□□□□ -0.52
MSL3-206ENST00000380693 UBTFP17480 764 aaKnown RBP11.77□□□□□ -0.52
MSL3-206ENST00000380693 BIVM-ERCC5R4GMW8 1640 aa11.75□□□□□ -0.53
MSL3-206ENST00000380693 CLIP1P30622 1438 aa11.7□□□□□ -0.54
MSL3-206ENST00000380693 CFTRP13569 1480 aa11.68□□□□□ -0.54
MSL3-206ENST00000380693 RAPGEF2Q9Y4G8 1499 aa11.68□□□□□ -0.54
MSL3-206ENST00000380693 VPS8Q8N3P4 1428 aa11.67□□□□□ -0.54
MSL3-206ENST00000380693 ERICH3Q5RHP9 1530 aa11.67□□□□□ -0.54
MSL3-206ENST00000380693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.66□□□□□ -0.54
MSL3-206ENST00000380693 CCER1Q8TC90 406 aaPredicted RBP11.66□□□□□ -0.54
MSL3-206ENST00000380693 PRXQ9BXM0 1461 aa11.65□□□□□ -0.54
MSL3-206ENST00000380693 CUX1P39880 1505 aa11.64□□□□□ -0.55
MSL3-206ENST00000380693 KIF27Q86VH2 1401 aa11.59□□□□□ -0.55
MSL3-206ENST00000380693 PRDM2Q13029 1718 aa11.59□□□□□ -0.55
MSL3-206ENST00000380693 TTBK1Q5TCY1 1321 aaPredicted RBP11.57□□□□□ -0.56
MSL3-206ENST00000380693 CADPSQ9ULU8 1353 aa11.54□□□□□ -0.56
MSL3-206ENST00000380693 APLP2Q06481 763 aa11.53□□□□□ -0.56
MSL3-206ENST00000380693 ARAP1Q96P48 1450 aa11.52□□□□□ -0.56
MSL3-206ENST00000380693 CC2D2AQ9P2K1 1620 aa11.46□□□□□ -0.57
MSL3-206ENST00000380693 IGF1RP08069 1367 aa11.45□□□□□ -0.58
MSL3-206ENST00000380693 CUX2O14529 1486 aa11.44□□□□□ -0.58
MSL3-206ENST00000380693 ARHGAP35Q9NRY4 1499 aa11.44□□□□□ -0.58
MSL3-206ENST00000380693 HNRNPUL2Q1KMD3 747 aaKnown RBP11.43□□□□□ -0.58
MSL3-206ENST00000380693 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
MSL3-206ENST00000380693 RANGAP1P46060 587 aaPredicted RBP11.42□□□□□ -0.58
MSL3-206ENST00000380693 DIEXFQ68CQ4 756 aaKnown RBP11.41□□□□□ -0.58
MSL3-206ENST00000380693 RRBP1Q9P2E9 1410 aaKnown RBP11.41□□□□□ -0.58
MSL3-206ENST00000380693 CLSPNQ9HAW4 1339 aa11.41□□□□□ -0.58
MSL3-206ENST00000380693 FANCD2Q9BXW9 1451 aa11.4□□□□□ -0.58
MSL3-206ENST00000380693 CARMIL1Q5VZK9 1371 aa11.39□□□□□ -0.59
MSL3-206ENST00000380693 MAP3K1Q13233 1512 aa11.39□□□□□ -0.59
MSL3-206ENST00000380693 ZNF316A6NFI3 1004 aaPredicted RBP11.38□□□□□ -0.59
MSL3-206ENST00000380693 KANK4Q5T7N3 995 aaPredicted RBP11.38□□□□□ -0.59
MSL3-206ENST00000380693 DNMBPQ6XZF7 1577 aa11.37□□□□□ -0.59
MSL3-206ENST00000380693 ABCA10Q8WWZ4 1543 aa11.36□□□□□ -0.59
MSL3-206ENST00000380693 TOPBP1Q92547 1522 aa11.33□□□□□ -0.6
MSL3-206ENST00000380693 DHX57Q6P158 1386 aaKnown RBP11.32□□□□□ -0.6
MSL3-206ENST00000380693 CCNB3Q8WWL7 1395 aa11.32□□□□□ -0.6
MSL3-206ENST00000380693 POLA1P09884 1462 aaPredicted RBP11.32□□□□□ -0.6
MSL3-206ENST00000380693 TIAM1Q13009 1591 aa11.32□□□□□ -0.6
MSL3-206ENST00000380693 SCAF1Q9H7N4 1312 aaKnown RBP11.31□□□□□ -0.6
MSL3-206ENST00000380693 FHAD1B1AJZ9 1412 aa11.31□□□□□ -0.6
MSL3-206ENST00000380693 LAMC3Q9Y6N6 1575 aa11.3□□□□□ -0.6
MSL3-206ENST00000380693 CUL7Q14999 1698 aa11.29□□□□□ -0.6
MSL3-206ENST00000380693 ACIN1Q9UKV3 1341 aaKnown RBP11.29□□□□□ -0.6
MSL3-206ENST00000380693 RAD54L2Q9Y4B4 1467 aa11.28□□□□□ -0.6
MSL3-206ENST00000380693 EFCAB5A4FU69 1503 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms