RNA–Protein interactions for RNA: ENST00000379378.7

E2F4-201, Transcript of E2F transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E2F4, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F4-201ENST00000379378 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.72■■■□□ 2.356e-12■■■■■ 223.6
E2F4-201ENST00000379378 SF3B1O75533 1304 aaKnown RBP eCLIP28.38■■■□□ 2.133e-6■■■■■ 109.1
E2F4-201ENST00000379378 PUM2Q8TB72 1066 aaKnown RBP eCLIP26.41■■□□□ 1.829e-18■■■■■ 71.6
E2F4-201ENST00000379378 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.31■■■■□ 3.888e-9■■■■■ 57.3
E2F4-201ENST00000379378 AKAP1Q92667 903 aaKnown RBP eCLIP24.3■■□□□ 1.484e-13■■■■■ 46.2
E2F4-201ENST00000379378 EFTUD2Q15029 972 aaKnown RBP eCLIP28.48■■■□□ 2.157e-7■■■■■ 37.3
E2F4-201ENST00000379378 CPEB4Q17RY0 729 aaKnown RBP eCLIP25.3■■□□□ 1.648e-6■■■■■ 36.9
E2F4-201ENST00000379378 AQRO60306 1485 aaKnown RBP eCLIP41.57■■■■■ 4.242e-7■■■■■ 36.2
E2F4-201ENST00000379378 UPF1Q92900 1129 aaKnown RBP eCLIP30.06■■■□□ 2.43e-7■■■■□ 24.9
E2F4-201ENST00000379378 HNRNPKP61978 463 aaKnown RBP eCLIP25.52■■□□□ 1.683e-7■■■■□ 22.4
E2F4-201ENST00000379378 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.26■□□□□ 0.991e-9■■■■□ 21.6
E2F4-201ENST00000379378 SF3A3Q12874 501 aaKnown RBP eCLIP28.35■■■□□ 2.132e-8■■■■□ 21
E2F4-201ENST00000379378 UTP18Q9Y5J1 556 aaKnown RBP eCLIP30.3■■■□□ 2.448e-6■■■■□ 20.4
E2F4-201ENST00000379378 PCBP1Q15365 356 aaKnown RBP eCLIP28.98■■■□□ 2.231e-11■■■■□ 20
E2F4-201ENST00000379378 ZC3H11AO75152 810 aaKnown RBP eCLIP29.58■■■□□ 2.333e-11■■■■□ 19.6
E2F4-201ENST00000379378 DDX3XO00571 662 aaKnown RBP eCLIP29.86■■■□□ 2.375e-32■■■■□ 19.4
E2F4-201ENST00000379378 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP30.69■■■□□ 2.57e-7■■■□□ 18.8
E2F4-201ENST00000379378 SF3B4Q15427 424 aaKnown RBP eCLIP24.2■■□□□ 1.472e-7■■■□□ 18.4
E2F4-201ENST00000379378 DDX6P26196 483 aaKnown RBP eCLIP27.2■■□□□ 1.953e-8■■■□□ 18.3
E2F4-201ENST00000379378 PCBP2Q15366 365 aaKnown RBP eCLIP27.09■■□□□ 1.933e-7■■■□□ 16.3
E2F4-201ENST00000379378 RBFOX2O43251 390 aaKnown RBP eCLIP22.64■■□□□ 1.215e-6■■■□□ 15.7
E2F4-201ENST00000379378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.54■■■■□ 3.765e-7■■■□□ 15.1
E2F4-201ENST00000379378 PPIGQ13427 754 aaKnown RBP eCLIP27.25■■□□□ 1.954e-7■■■□□ 15
E2F4-201ENST00000379378 PRPF4O43172 522 aaKnown RBP eCLIP28.39■■■□□ 2.141e-8■■■□□ 15
E2F4-201ENST00000379378 SMNDC1O75940 238 aaKnown RBP eCLIP26.83■■□□□ 1.895e-6■■■□□ 14.8
E2F4-201ENST00000379378 METAP2P50579 478 aaKnown RBP eCLIP32.13■■■□□ 2.733e-6■■□□□ 14.5
E2F4-201ENST00000379378 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.54■■■□□ 2.325e-11■■□□□ 14.5
E2F4-201ENST00000379378 RBM22Q9NW64 420 aaKnown RBP eCLIP27.97■■■□□ 2.072e-6■■□□□ 14.4
E2F4-201ENST00000379378 RBM15Q96T37 977 aaKnown RBP eCLIP28.74■■■□□ 2.195e-7■■□□□ 13.4
E2F4-201ENST00000379378 DDX24Q9GZR7 859 aaKnown RBP eCLIP32.61■■■□□ 2.816e-7■■□□□ 12.9
E2F4-201ENST00000379378 SDAD1Q9NVU7 687 aaKnown RBP eCLIP27.58■■■□□ 2.013e-6■■□□□ 12.3
E2F4-201ENST00000379378 GTF2F1P35269 517 aaKnown RBP eCLIP30.87■■■□□ 2.536e-6■■□□□ 12.3
E2F4-201ENST00000379378 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP31.65■■■□□ 2.662e-6■■□□□ 11.9
E2F4-201ENST00000379378 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.35■■■□□ 2.136e-7■■□□□ 11.8
E2F4-201ENST00000379378 RBM5P52756 815 aaKnown RBP eCLIP31.2■■■□□ 2.591e-6■■□□□ 11.6
E2F4-201ENST00000379378 KHSRPQ92945 711 aaKnown RBP eCLIP28.8■■■□□ 2.21e-6■■□□□ 11.6
E2F4-201ENST00000379378 PABPC4Q13310 644 aaKnown RBP eCLIP30.5■■■□□ 2.472e-6■■□□□ 11.4
E2F4-201ENST00000379378 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.09■■■□□ 2.094e-7■□□□□ 10.7
E2F4-201ENST00000379378 STAU2Q9NUL3 570 aaKnown RBP eCLIP28.77■■■□□ 2.22e-7■□□□□ 10
E2F4-201ENST00000379378 LARP4Q71RC2 724 aaKnown RBP eCLIP27.23■■□□□ 1.954e-6■□□□□ 9.4
E2F4-201ENST00000379378 U2AF2P26368 475 aaKnown RBP eCLIP31.87■■■□□ 2.692e-8■□□□□ 8.6
E2F4-201ENST00000379378 YBX3P16989 372 aaKnown RBP eCLIP29.87■■■□□ 2.373e-6■□□□□ 8.1
Retrieved 42 of 42 RNA–protein pairs in 11.7 ms