RNA–Protein interactions for RNA: ENST00000378743.7

ZFC3H1-201, Transcript of zinc finger C3H1-type containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZFC3H1, Length 7,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1-201ENST00000378743 DCAF8L2P0C7V8 631 aa21.23■□□□□ 0.99
ZFC3H1-201ENST00000378743 SUPT5HO00267 1087 aaKnown RBP20.24■□□□□ 0.83
ZFC3H1-201ENST00000378743 EHMT2Q96KQ7 1210 aa20.07■□□□□ 0.8
ZFC3H1-201ENST00000378743 NISCHQ9Y2I1 1504 aa20.06■□□□□ 0.8
ZFC3H1-201ENST00000378743 SHROOM4Q9ULL8 1493 aa19.94■□□□□ 0.78
ZFC3H1-201ENST00000378743 PELP1Q8IZL8 1130 aaKnown RBP19.57■□□□□ 0.72
ZFC3H1-201ENST00000378743 TTBK1Q5TCY1 1321 aaPredicted RBP19.39■□□□□ 0.69
ZFC3H1-201ENST00000378743 APLP2Q06481 763 aa19.25■□□□□ 0.67
ZFC3H1-201ENST00000378743 FAM9AQ8IZU1 332 aaPredicted RBP19.21■□□□□ 0.67
ZFC3H1-201ENST00000378743 PCGF6Q9BYE7 350 aa19.17■□□□□ 0.66
ZFC3H1-201ENST00000378743 ERICH6Q7L0X2 663 aa19.03■□□□□ 0.64
ZFC3H1-201ENST00000378743 RANGAP1P46060 587 aaPredicted RBP19.02■□□□□ 0.63
ZFC3H1-201ENST00000378743 CENPBP07199 599 aaPredicted RBP18.83■□□□□ 0.6
ZFC3H1-201ENST00000378743 CCER1Q8TC90 406 aaPredicted RBP18.83■□□□□ 0.6
ZFC3H1-201ENST00000378743 ATP1B4Q9UN42 357 aaPredicted RBP18.8■□□□□ 0.6
ZFC3H1-201ENST00000378743 YTHDC1Q96MU7 727 aaKnown RBP18.74■□□□□ 0.59
ZFC3H1-201ENST00000378743 ZEB1P37275 1124 aaPredicted RBP18.63■□□□□ 0.57
ZFC3H1-201ENST00000378743 TRIM41Q8WV44 630 aa18.6■□□□□ 0.57
ZFC3H1-201ENST00000378743 PPARGC1BQ86YN6 1023 aaKnown RBP18.57■□□□□ 0.56
ZFC3H1-201ENST00000378743 UBTFP17480 764 aaKnown RBP18.5■□□□□ 0.55
ZFC3H1-201ENST00000378743 NEFLP07196 543 aa18.49■□□□□ 0.55
ZFC3H1-201ENST00000378743 MYT1Q01538 1121 aa18.36■□□□□ 0.53
ZFC3H1-201ENST00000378743 CHIC1Q5VXU3 224 aa18.25■□□□□ 0.51
ZFC3H1-201ENST00000378743 POLR3GLQ9BT43 218 aa18.18■□□□□ 0.5
ZFC3H1-201ENST00000378743 MYT1LQ9UL68 1186 aa18.16■□□□□ 0.5
ZFC3H1-201ENST00000378743 ITGAEP38570 1179 aa18.15■□□□□ 0.5
ZFC3H1-201ENST00000378743 CNGB1Q14028 1251 aaPredicted RBP18.13■□□□□ 0.49
ZFC3H1-201ENST00000378743 TRIM26Q12899 539 aaPredicted RBP18.12■□□□□ 0.49
ZFC3H1-201ENST00000378743 DAXXQ9UER7 740 aaPredicted RBP18.09■□□□□ 0.49
ZFC3H1-201ENST00000378743 HRCP23327 699 aa18.02■□□□□ 0.48
ZFC3H1-201ENST00000378743 LOC105371045A0A1W2PR82 267 aa17.98■□□□□ 0.47
ZFC3H1-201ENST00000378743 HNRNPUL2Q1KMD3 747 aaKnown RBP17.94■□□□□ 0.46
ZFC3H1-201ENST00000378743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.92■□□□□ 0.46
ZFC3H1-201ENST00000378743 SLC4A1APQ9BWU0 796 aaKnown RBP17.83■□□□□ 0.45
ZFC3H1-201ENST00000378743 ZNF316A6NFI3 1004 aaPredicted RBP17.72■□□□□ 0.43
ZFC3H1-201ENST00000378743 DIEXFQ68CQ4 756 aaKnown RBP17.71■□□□□ 0.43
ZFC3H1-201ENST00000378743 CLSPNQ9HAW4 1339 aa17.67■□□□□ 0.42
ZFC3H1-201ENST00000378743 RTL5Q5HYW3 569 aaPredicted RBP17.63■□□□□ 0.41
ZFC3H1-201ENST00000378743 BCANQ96GW7 911 aa17.61■□□□□ 0.41
ZFC3H1-201ENST00000378743 FAM50AQ14320 339 aaKnown RBP17.58■□□□□ 0.4
ZFC3H1-201ENST00000378743 NEUROD1Q13562 356 aa17.55■□□□□ 0.4
ZFC3H1-201ENST00000378743 ABCC9O60706 1549 aa17.55■□□□□ 0.4
ZFC3H1-201ENST00000378743 GTF3C3Q9Y5Q9 886 aa17.47■□□□□ 0.39
ZFC3H1-201ENST00000378743 TRIM52Q96A61 297 aa17.47■□□□□ 0.39
ZFC3H1-201ENST00000378743 PLPPR3Q6T4P5 718 aa17.41■□□□□ 0.38
ZFC3H1-201ENST00000378743 BCL11AQ9H165 835 aa17.41■□□□□ 0.38
ZFC3H1-201ENST00000378743 ZNF326Q5BKZ1 582 aaKnown RBP17.35■□□□□ 0.37
ZFC3H1-201ENST00000378743 CDK11AQ9UQ88 783 aaPredicted RBP17.33■□□□□ 0.36
ZFC3H1-201ENST00000378743 ANP32CO43423 234 aa17.31■□□□□ 0.36
ZFC3H1-201ENST00000378743 SLC24A1O60721 1099 aa17.28■□□□□ 0.36
ZFC3H1-201ENST00000378743 PABPN1Q86U42 306 aaKnown RBP eCLIP17.21■□□□□ 0.34
ZFC3H1-201ENST00000378743 ZBTB47Q9UFB7 747 aaPredicted RBP17.2■□□□□ 0.34
ZFC3H1-201ENST00000378743 CANXP27824 592 aaKnown RBP17.19■□□□□ 0.34
ZFC3H1-201ENST00000378743 NPM2Q86SE8 214 aaKnown RBP17.14■□□□□ 0.33
ZFC3H1-201ENST00000378743 ARID3CA6NKF2 412 aa17.09■□□□□ 0.33
ZFC3H1-201ENST00000378743 FBLN2P98095 1184 aa17.06■□□□□ 0.32
ZFC3H1-201ENST00000378743 P3H3Q8IVL6 736 aa17.06■□□□□ 0.32
ZFC3H1-201ENST00000378743 ANP32AP39687 249 aaKnown RBP17.04■□□□□ 0.32
ZFC3H1-201ENST00000378743 ACIN1Q9UKV3 1341 aaKnown RBP17.03■□□□□ 0.32
ZFC3H1-201ENST00000378743 FKBP8Q14318 412 aa16.95■□□□□ 0.3
ZFC3H1-201ENST00000378743 EIF5BO60841 1220 aaKnown RBP16.93■□□□□ 0.3
ZFC3H1-201ENST00000378743 NEFMP07197 916 aa16.92■□□□□ 0.3
ZFC3H1-201ENST00000378743 ZNF777Q9ULD5 760 aaPredicted RBP16.9■□□□□ 0.3
ZFC3H1-201ENST00000378743 SALL2Q9Y467 1007 aaPredicted RBP16.87■□□□□ 0.29
ZFC3H1-201ENST00000378743 NBR1Q14596 966 aa16.85■□□□□ 0.29
ZFC3H1-201ENST00000378743 FAM9BQ8IZU0 186 aa16.83■□□□□ 0.28
ZFC3H1-201ENST00000378743 HSP90AA1P07900 732 aaKnown RBP16.82■□□□□ 0.28
ZFC3H1-201ENST00000378743 ARXQ96QS3 562 aa16.82■□□□□ 0.28
ZFC3H1-201ENST00000378743 PLEKHG5O94827 1062 aa16.8■□□□□ 0.28
ZFC3H1-201ENST00000378743 HNRNPUQ00839 825 aaKnown RBP eCLIP16.79■□□□□ 0.28
ZFC3H1-201ENST00000378743 A0A0G2JS52 829 aa16.78■□□□□ 0.28
ZFC3H1-201ENST00000378743 ANP32BQ92688 251 aaKnown RBP16.78■□□□□ 0.28
ZFC3H1-201ENST00000378743 DDX10Q13206 875 aaKnown RBP16.77■□□□□ 0.27
ZFC3H1-201ENST00000378743 SCRIBQ14160 1630 aa16.77■□□□□ 0.27
ZFC3H1-201ENST00000378743 CCDC180Q9P1Z9 1646 aa16.76■□□□□ 0.27
ZFC3H1-201ENST00000378743 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
ZFC3H1-201ENST00000378743 CHGAP10645 457 aaKnown RBP16.73■□□□□ 0.27
ZFC3H1-201ENST00000378743 TONSLQ96HA7 1378 aa16.71■□□□□ 0.27
ZFC3H1-201ENST00000378743 SENP3Q9H4L4 574 aaPredicted RBP16.71■□□□□ 0.27
ZFC3H1-201ENST00000378743 IRX6P78412 446 aaPredicted RBP16.7■□□□□ 0.26
ZFC3H1-201ENST00000378743 UPF2Q9HAU5 1272 aaKnown RBP16.68■□□□□ 0.26
ZFC3H1-201ENST00000378743 CSRNP3Q8WYN3 585 aa16.65■□□□□ 0.26
ZFC3H1-201ENST00000378743 STAG3Q9UJ98 1225 aa16.63■□□□□ 0.25
ZFC3H1-201ENST00000378743 CCDC136Q96JN2 1154 aa16.62■□□□□ 0.25
ZFC3H1-201ENST00000378743 HIRIP3Q9BW71 556 aaPredicted RBP16.62■□□□□ 0.25
ZFC3H1-201ENST00000378743 CHIC2Q9UKJ5 165 aa16.6■□□□□ 0.25
ZFC3H1-201ENST00000378743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.6■□□□□ 0.251e-9■■■□□ 15.9
ZFC3H1-201ENST00000378743 ZCCHC6Q5VYS8 1495 aaKnown RBP16.6■□□□□ 0.25
ZFC3H1-201ENST00000378743 TMC1Q8TDI8 760 aa16.6■□□□□ 0.25
ZFC3H1-201ENST00000378743 ESF1Q9H501 851 aaKnown RBP16.58■□□□□ 0.24
ZFC3H1-201ENST00000378743 KDM2AQ9Y2K7 1162 aa16.57■□□□□ 0.24
ZFC3H1-201ENST00000378743 RB1CC1Q8TDY2 1594 aa16.54■□□□□ 0.24
ZFC3H1-201ENST00000378743 WDR43Q15061 677 aaKnown RBP eCLIP16.53■□□□□ 0.241e-6■□□□□ 9.5
ZFC3H1-201ENST00000378743 DCAF1Q9Y4B6 1507 aa16.53■□□□□ 0.24
ZFC3H1-201ENST00000378743 MIER1Q8N108 512 aa16.51■□□□□ 0.23
ZFC3H1-201ENST00000378743 GLIPR1L2Q4G1C9 344 aa16.51■□□□□ 0.23
ZFC3H1-201ENST00000378743 ZBTB7CA1YPR0 619 aa16.5■□□□□ 0.23
ZFC3H1-201ENST00000378743 SENP3-EIF4A1A0A087X0R7 540 aa16.5■□□□□ 0.23
ZFC3H1-201ENST00000378743 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.48■□□□□ 0.23
ZFC3H1-201ENST00000378743 MRS2Q9HD23 443 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms