RNA–Protein interactions for RNA: ENST00000378308.6

USP9X-202, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP9X, Length 8,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-202ENST00000378308 DCAF8L2P0C7V8 631 aa22.93■■□□□ 1.26
USP9X-202ENST00000378308 PELP1Q8IZL8 1130 aaKnown RBP21.52■■□□□ 1.03
USP9X-202ENST00000378308 EHMT2Q96KQ7 1210 aa21.44■■□□□ 1.02
USP9X-202ENST00000378308 SUPT5HO00267 1087 aaKnown RBP21.31■■□□□ 1
USP9X-202ENST00000378308 APLP2Q06481 763 aa20.97■□□□□ 0.95
USP9X-202ENST00000378308 FAM9AQ8IZU1 332 aaPredicted RBP20.91■□□□□ 0.94
USP9X-202ENST00000378308 ERICH6Q7L0X2 663 aa20.84■□□□□ 0.93
USP9X-202ENST00000378308 SHROOM4Q9ULL8 1493 aa20.83■□□□□ 0.93
USP9X-202ENST00000378308 TTBK1Q5TCY1 1321 aaPredicted RBP20.71■□□□□ 0.91
USP9X-202ENST00000378308 CCER1Q8TC90 406 aaPredicted RBP20.57■□□□□ 0.88
USP9X-202ENST00000378308 RANGAP1P46060 587 aaPredicted RBP20.46■□□□□ 0.87
USP9X-202ENST00000378308 ATP1B4Q9UN42 357 aaPredicted RBP20.45■□□□□ 0.86
USP9X-202ENST00000378308 PCGF6Q9BYE7 350 aa20.27■□□□□ 0.83
USP9X-202ENST00000378308 CENPBP07199 599 aaPredicted RBP20.14■□□□□ 0.82
USP9X-202ENST00000378308 MYT1Q01538 1121 aa20.14■□□□□ 0.81
USP9X-202ENST00000378308 NEFLP07196 543 aa20.09■□□□□ 0.81
USP9X-202ENST00000378308 MYT1LQ9UL68 1186 aa19.95■□□□□ 0.78
USP9X-202ENST00000378308 DAXXQ9UER7 740 aaPredicted RBP19.95■□□□□ 0.78
USP9X-202ENST00000378308 YTHDC1Q96MU7 727 aaKnown RBP19.93■□□□□ 0.78
USP9X-202ENST00000378308 CHIC1Q5VXU3 224 aa19.83■□□□□ 0.76
USP9X-202ENST00000378308 UBTFP17480 764 aaKnown RBP19.78■□□□□ 0.76
USP9X-202ENST00000378308 POLR3GLQ9BT43 218 aa19.77■□□□□ 0.75
USP9X-202ENST00000378308 NISCHQ9Y2I1 1504 aa19.74■□□□□ 0.75
USP9X-202ENST00000378308 SLC4A1APQ9BWU0 796 aaKnown RBP19.68■□□□□ 0.74
USP9X-202ENST00000378308 ZEB1P37275 1124 aaPredicted RBP19.67■□□□□ 0.74
USP9X-202ENST00000378308 TRIM41Q8WV44 630 aa19.62■□□□□ 0.73
USP9X-202ENST00000378308 CNGB1Q14028 1251 aaPredicted RBP19.61■□□□□ 0.73
USP9X-202ENST00000378308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.57■□□□□ 0.72
USP9X-202ENST00000378308 HNRNPUL2Q1KMD3 747 aaKnown RBP19.57■□□□□ 0.72
USP9X-202ENST00000378308 PPARGC1BQ86YN6 1023 aaKnown RBP19.46■□□□□ 0.71
USP9X-202ENST00000378308 ITGAEP38570 1179 aa19.43■□□□□ 0.7
USP9X-202ENST00000378308 ZNF316A6NFI3 1004 aaPredicted RBP19.42■□□□□ 0.7
USP9X-202ENST00000378308 CLSPNQ9HAW4 1339 aa19.39■□□□□ 0.69
USP9X-202ENST00000378308 SLC24A1O60721 1099 aa19.21■□□□□ 0.67
USP9X-202ENST00000378308 RTL5Q5HYW3 569 aaPredicted RBP19.17■□□□□ 0.66
USP9X-202ENST00000378308 BCL11AQ9H165 835 aa19.11■□□□□ 0.65
USP9X-202ENST00000378308 ZBTB47Q9UFB7 747 aaPredicted RBP19.04■□□□□ 0.64
USP9X-202ENST00000378308 BCANQ96GW7 911 aa18.9■□□□□ 0.62
USP9X-202ENST00000378308 TRIM26Q12899 539 aaPredicted RBP18.82■□□□□ 0.6
USP9X-202ENST00000378308 CANXP27824 592 aaKnown RBP18.78■□□□□ 0.6
USP9X-202ENST00000378308 FAM50AQ14320 339 aaKnown RBP18.78■□□□□ 0.6
USP9X-202ENST00000378308 TRIM52Q96A61 297 aa18.77■□□□□ 0.59
USP9X-202ENST00000378308 ZNF326Q5BKZ1 582 aaKnown RBP18.72■□□□□ 0.59
USP9X-202ENST00000378308 HRCP23327 699 aa18.68■□□□□ 0.58
USP9X-202ENST00000378308 NEFMP07197 916 aa18.68■□□□□ 0.58
USP9X-202ENST00000378308 NEUROD1Q13562 356 aa18.66■□□□□ 0.58
USP9X-202ENST00000378308 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
USP9X-202ENST00000378308 FBLN2P98095 1184 aa18.54■□□□□ 0.56
USP9X-202ENST00000378308 DIEXFQ68CQ4 756 aaKnown RBP18.53■□□□□ 0.56
USP9X-202ENST00000378308 CDK11AQ9UQ88 783 aaPredicted RBP18.53■□□□□ 0.56
USP9X-202ENST00000378308 ANP32CO43423 234 aa18.46■□□□□ 0.55
USP9X-202ENST00000378308 LOC105371045A0A1W2PR82 267 aa18.45■□□□□ 0.54
USP9X-202ENST00000378308 HSP90AA1P07900 732 aaKnown RBP18.45■□□□□ 0.54
USP9X-202ENST00000378308 ANP32BQ92688 251 aaKnown RBP18.44■□□□□ 0.54
USP9X-202ENST00000378308 ESF1Q9H501 851 aaKnown RBP18.4■□□□□ 0.54
USP9X-202ENST00000378308 NPM2Q86SE8 214 aaKnown RBP18.37■□□□□ 0.53
USP9X-202ENST00000378308 A0A0G2JS52 829 aa18.34■□□□□ 0.53
USP9X-202ENST00000378308 ANP32AP39687 249 aaKnown RBP18.32■□□□□ 0.52
USP9X-202ENST00000378308 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
USP9X-202ENST00000378308 CDK11BP21127 795 aaKnown RBP18.31■□□□□ 0.52
USP9X-202ENST00000378308 STAG3Q9UJ98 1225 aa18.31■□□□□ 0.52
USP9X-202ENST00000378308 EIF5BO60841 1220 aaKnown RBP18.3■□□□□ 0.52
USP9X-202ENST00000378308 ARID3CA6NKF2 412 aa18.27■□□□□ 0.51
USP9X-202ENST00000378308 CHGAP10645 457 aaKnown RBP18.18■□□□□ 0.5
USP9X-202ENST00000378308 UPF2Q9HAU5 1272 aaKnown RBP18.18■□□□□ 0.5
USP9X-202ENST00000378308 ZNF777Q9ULD5 760 aaPredicted RBP18.17■□□□□ 0.5
USP9X-202ENST00000378308 ARXQ96QS3 562 aa18.15■□□□□ 0.5
USP9X-202ENST00000378308 GTF3C3Q9Y5Q9 886 aa18.13■□□□□ 0.49
USP9X-202ENST00000378308 TULP1O00294 542 aaPredicted RBP18.11■□□□□ 0.49
USP9X-202ENST00000378308 PLEKHG5O94827 1062 aa18.1■□□□□ 0.49
USP9X-202ENST00000378308 P3H3Q8IVL6 736 aa18.04■□□□□ 0.48
USP9X-202ENST00000378308 PABPN1Q86U42 306 aaKnown RBP eCLIP18.04■□□□□ 0.48
USP9X-202ENST00000378308 ZBTB7CA1YPR0 619 aa18.02■□□□□ 0.48
USP9X-202ENST00000378308 GLIPR1L2Q4G1C9 344 aa18.02■□□□□ 0.47
USP9X-202ENST00000378308 SALL2Q9Y467 1007 aaPredicted RBP18.02■□□□□ 0.47
USP9X-202ENST00000378308 C14orf37Q86TY3 774 aa17.93■□□□□ 0.46
USP9X-202ENST00000378308 SENP3Q9H4L4 574 aaPredicted RBP17.91■□□□□ 0.46
USP9X-202ENST00000378308 NBR1Q14596 966 aa17.91■□□□□ 0.46
USP9X-202ENST00000378308 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
USP9X-202ENST00000378308 MYH16Q9H6N6 1097 aa17.89■□□□□ 0.45
USP9X-202ENST00000378308 NPM1P06748 294 aaKnown RBP eCLIP17.87■□□□□ 0.45
USP9X-202ENST00000378308 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.86■□□□□ 0.45
USP9X-202ENST00000378308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.85■□□□□ 0.452e-6■■■■□ 22.6
USP9X-202ENST00000378308 FAM9BQ8IZU0 186 aa17.85■□□□□ 0.45
USP9X-202ENST00000378308 HAP1P54257 671 aaPredicted RBP17.83■□□□□ 0.44
USP9X-202ENST00000378308 ABCC9O60706 1549 aa17.83■□□□□ 0.44
USP9X-202ENST00000378308 WDR43Q15061 677 aaKnown RBP eCLIP17.81■□□□□ 0.449e-7■■■□□ 16.2
USP9X-202ENST00000378308 FKBP8Q14318 412 aa17.8■□□□□ 0.44
USP9X-202ENST00000378308 TPRNQ4KMQ1 711 aa17.79■□□□□ 0.44
USP9X-202ENST00000378308 NPHP1O15259 732 aa17.79■□□□□ 0.44
USP9X-202ENST00000378308 HNRNPUQ00839 825 aaKnown RBP eCLIP17.78■□□□□ 0.44
USP9X-202ENST00000378308 TAOK2Q9UL54 1235 aa17.76■□□□□ 0.43
USP9X-202ENST00000378308 TONSLQ96HA7 1378 aa17.76■□□□□ 0.43
USP9X-202ENST00000378308 ZRSR1Q15695 479 aaKnown RBP17.75■□□□□ 0.43
USP9X-202ENST00000378308 TMC1Q8TDI8 760 aa17.75■□□□□ 0.43
USP9X-202ENST00000378308 NCLP19338 710 aaKnown RBP17.73■□□□□ 0.43
USP9X-202ENST00000378308 CCDC136Q96JN2 1154 aa17.73■□□□□ 0.43
USP9X-202ENST00000378308 KDM2AQ9Y2K7 1162 aa17.68■□□□□ 0.42
USP9X-202ENST00000378308 TRIM44Q96DX7 344 aaPredicted RBP17.68■□□□□ 0.42
USP9X-202ENST00000378308 PPP1R15AO75807 674 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms