RNA–Protein interactions for RNA: ENST00000378158.5

CASK-202, Transcript of calcium/calmodulin dependent serine protein kinase, humanhuman

TSL 5 BASIC

Gene CASK, Length 3,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASK-202ENST00000378158 NISCHQ9Y2I1 1504 aa30.17■■■□□ 2.42
CASK-202ENST00000378158 SHROOM4Q9ULL8 1493 aa27.88■■■□□ 2.05
CASK-202ENST00000378158 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
CASK-202ENST00000378158 SUPT5HO00267 1087 aaKnown RBP27.74■■■□□ 2.03
CASK-202ENST00000378158 PCGF6Q9BYE7 350 aa26.43■■□□□ 1.82
CASK-202ENST00000378158 EHMT2Q96KQ7 1210 aa26.33■■□□□ 1.81
CASK-202ENST00000378158 CHIC1Q5VXU3 224 aa26.08■■□□□ 1.77
CASK-202ENST00000378158 LOC105371045A0A1W2PR82 267 aa25.95■■□□□ 1.75
CASK-202ENST00000378158 FAM9AQ8IZU1 332 aaPredicted RBP25.94■■□□□ 1.74
CASK-202ENST00000378158 PPARGC1BQ86YN6 1023 aaKnown RBP25.87■■□□□ 1.73
CASK-202ENST00000378158 HRCP23327 699 aa25.82■■□□□ 1.72
CASK-202ENST00000378158 MYO15BQ96JP2 1530 aa25.47■■□□□ 1.67
CASK-202ENST00000378158 TRIM41Q8WV44 630 aa25.43■■□□□ 1.66
CASK-202ENST00000378158 TTBK1Q5TCY1 1321 aaPredicted RBP25.42■■□□□ 1.66
CASK-202ENST00000378158 ZCCHC6Q5VYS8 1495 aaKnown RBP25.32■■□□□ 1.64
CASK-202ENST00000378158 TRIM26Q12899 539 aaPredicted RBP25.21■■□□□ 1.63
CASK-202ENST00000378158 CCER1Q8TC90 406 aaPredicted RBP24.83■■□□□ 1.57
CASK-202ENST00000378158 ZEB1P37275 1124 aaPredicted RBP24.76■■□□□ 1.55
CASK-202ENST00000378158 RANGAP1P46060 587 aaPredicted RBP24.74■■□□□ 1.55
CASK-202ENST00000378158 PELP1Q8IZL8 1130 aaKnown RBP24.74■■□□□ 1.55
CASK-202ENST00000378158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.72■■□□□ 1.55
CASK-202ENST00000378158 CCDC180Q9P1Z9 1646 aa24.66■■□□□ 1.54
CASK-202ENST00000378158 UBTFP17480 764 aaKnown RBP24.56■■□□□ 1.52
CASK-202ENST00000378158 DCAF1Q9Y4B6 1507 aa24.55■■□□□ 1.52
CASK-202ENST00000378158 ABCC9O60706 1549 aa24.52■■□□□ 1.52
CASK-202ENST00000378158 SCRIBQ14160 1630 aa24.46■■□□□ 1.51
CASK-202ENST00000378158 YTHDC1Q96MU7 727 aaKnown RBP24.41■■□□□ 1.5
CASK-202ENST00000378158 SCAF1Q9H7N4 1312 aaKnown RBP24.4■■□□□ 1.5
CASK-202ENST00000378158 RSF1Q96T23 1441 aaPredicted RBP24.32■■□□□ 1.48
CASK-202ENST00000378158 APLP2Q06481 763 aa24.24■■□□□ 1.47
CASK-202ENST00000378158 HNRNPUL2Q1KMD3 747 aaKnown RBP24.24■■□□□ 1.47
CASK-202ENST00000378158 PABPN1Q86U42 306 aaKnown RBP eCLIP24.15■■□□□ 1.46
CASK-202ENST00000378158 DIEXFQ68CQ4 756 aaKnown RBP24.15■■□□□ 1.46
CASK-202ENST00000378158 CENPBP07199 599 aaPredicted RBP24.14■■□□□ 1.46
CASK-202ENST00000378158 GTF3C3Q9Y5Q9 886 aa24.09■■□□□ 1.45
CASK-202ENST00000378158 CECR2Q9BXF3 1484 aa24.01■■□□□ 1.43
CASK-202ENST00000378158 RB1CC1Q8TDY2 1594 aa23.96■■□□□ 1.43
CASK-202ENST00000378158 NEUROD1Q13562 356 aa23.96■■□□□ 1.43
CASK-202ENST00000378158 ACIN1Q9UKV3 1341 aaKnown RBP23.9■■□□□ 1.42
CASK-202ENST00000378158 ITGAEP38570 1179 aa23.86■■□□□ 1.41
CASK-202ENST00000378158 CSRNP3Q8WYN3 585 aa23.81■■□□□ 1.4
CASK-202ENST00000378158 ATP1B4Q9UN42 357 aaPredicted RBP23.74■■□□□ 1.39
CASK-202ENST00000378158 MROH2BQ7Z745 1585 aa23.71■■□□□ 1.39
CASK-202ENST00000378158 MYT1Q01538 1121 aa23.7■■□□□ 1.38
CASK-202ENST00000378158 ZNF316A6NFI3 1004 aaPredicted RBP23.65■■□□□ 1.38
CASK-202ENST00000378158 SOGA1O94964 1423 aa23.53■■□□□ 1.36
CASK-202ENST00000378158 CEP162Q5TB80 1403 aa23.51■■□□□ 1.35
CASK-202ENST00000378158 WIZO95785 1651 aa23.5■■□□□ 1.35
CASK-202ENST00000378158 ABCC8Q09428 1581 aa23.49■■□□□ 1.35
CASK-202ENST00000378158 MIER1Q8N108 512 aa23.48■■□□□ 1.35
CASK-202ENST00000378158 CCDC88BA6NC98 1476 aa23.46■■□□□ 1.35
CASK-202ENST00000378158 NACADO15069 1562 aa23.31■■□□□ 1.32
CASK-202ENST00000378158 RUSC2Q8N2Y8 1516 aa23.29■■□□□ 1.32
CASK-202ENST00000378158 TNIKQ9UKE5 1360 aa23.23■■□□□ 1.31
CASK-202ENST00000378158 P3H3Q8IVL6 736 aa23.21■■□□□ 1.31
CASK-202ENST00000378158 BCANQ96GW7 911 aa23.2■■□□□ 1.31
CASK-202ENST00000378158 FAM50AQ14320 339 aaKnown RBP23.18■■□□□ 1.3
CASK-202ENST00000378158 CLIP1P30622 1438 aa23.18■■□□□ 1.3
CASK-202ENST00000378158 BAZ1AQ9NRL2 1556 aaPredicted RBP23.18■■□□□ 1.3
CASK-202ENST00000378158 WRNQ14191 1432 aaPredicted RBP eCLIP23.14■■□□□ 1.3
CASK-202ENST00000378158 GOLGA3Q08378 1498 aa23.09■■□□□ 1.29
CASK-202ENST00000378158 HIRIP3Q9BW71 556 aaPredicted RBP23.05■■□□□ 1.28
CASK-202ENST00000378158 CNGB1Q14028 1251 aaPredicted RBP23.01■■□□□ 1.27
CASK-202ENST00000378158 KANK4Q5T7N3 995 aaPredicted RBP22.96■■□□□ 1.27
CASK-202ENST00000378158 EEA1Q15075 1411 aa22.93■■□□□ 1.26
CASK-202ENST00000378158 DDX10Q13206 875 aaKnown RBP22.92■■□□□ 1.26
CASK-202ENST00000378158 NEFLP07196 543 aa22.9■■□□□ 1.26
CASK-202ENST00000378158 TOP2AP11388 1531 aaKnown RBP22.87■■□□□ 1.25
CASK-202ENST00000378158 CEP164Q9UPV0 1460 aa22.86■■□□□ 1.25
CASK-202ENST00000378158 ARID3CA6NKF2 412 aa22.8■■□□□ 1.24
CASK-202ENST00000378158 RAPGEF2Q9Y4G8 1499 aa22.78■■□□□ 1.24
CASK-202ENST00000378158 SMARCA2P51531 1590 aa22.77■■□□□ 1.24
CASK-202ENST00000378158 TRIM52Q96A61 297 aa22.77■■□□□ 1.24
CASK-202ENST00000378158 SMARCA4P51532 1647 aa22.77■■□□□ 1.24
CASK-202ENST00000378158 SIN3AQ96ST3 1273 aa22.77■■□□□ 1.24
CASK-202ENST00000378158 BAZ1BQ9UIG0 1483 aaKnown RBP22.76■■□□□ 1.23
CASK-202ENST00000378158 VPS8Q8N3P4 1428 aa22.75■■□□□ 1.23
CASK-202ENST00000378158 POLR3GLQ9BT43 218 aa22.73■■□□□ 1.23
CASK-202ENST00000378158 FKBP8Q14318 412 aa22.73■■□□□ 1.23
CASK-202ENST00000378158 KCNH8Q96L42 1107 aa22.72■■□□□ 1.23
CASK-202ENST00000378158 ERICH6Q7L0X2 663 aa22.7■■□□□ 1.22
CASK-202ENST00000378158 SUPT16HQ9Y5B9 1047 aaKnown RBP22.64■■□□□ 1.21
CASK-202ENST00000378158 ANP32CO43423 234 aa22.62■■□□□ 1.21
CASK-202ENST00000378158 CHIC2Q9UKJ5 165 aa22.55■■□□□ 1.2
CASK-202ENST00000378158 IRX6P78412 446 aaPredicted RBP22.54■■□□□ 1.2
CASK-202ENST00000378158 DHX57Q6P158 1386 aaKnown RBP22.52■■□□□ 1.2
CASK-202ENST00000378158 CCNB3Q8WWL7 1395 aa22.51■■□□□ 1.19
CASK-202ENST00000378158 BCL11AQ9H165 835 aa22.5■■□□□ 1.19
CASK-202ENST00000378158 ANP32EQ9BTT0 268 aa22.49■■□□□ 1.19
CASK-202ENST00000378158 KIF27Q86VH2 1401 aa22.48■■□□□ 1.19
CASK-202ENST00000378158 ATAD2BQ9ULI0 1458 aa22.48■■□□□ 1.19
CASK-202ENST00000378158 SYNJ1O43426 1573 aa22.46■■□□□ 1.19
CASK-202ENST00000378158 SENP3-EIF4A1A0A087X0R7 540 aa22.44■■□□□ 1.18
CASK-202ENST00000378158 ZNF326Q5BKZ1 582 aaKnown RBP22.42■■□□□ 1.18
CASK-202ENST00000378158 HNRNPUQ00839 825 aaKnown RBP eCLIP22.42■■□□□ 1.18
CASK-202ENST00000378158 RAB3GAP2Q9H2M9 1393 aa22.4■■□□□ 1.18
CASK-202ENST00000378158 TONSLQ96HA7 1378 aa22.4■■□□□ 1.18
CASK-202ENST00000378158 TSHZ2Q9NRE2 1034 aa22.39■■□□□ 1.18
CASK-202ENST00000378158 RRP7BPQ9NSQ0 103 aa22.38■■□□□ 1.17
CASK-202ENST00000378158 CLSPNQ9HAW4 1339 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms