RNA–Protein interactions for RNA: ENST00000378132.2

PCDHA2-201, Transcript of protocadherin alpha 2, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA2, Length 2,626 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2-201ENST00000378132 NISCHQ9Y2I1 1504 aa35.43■■■■□ 3.26
PCDHA2-201ENST00000378132 CCDC180Q9P1Z9 1646 aa30.25■■■□□ 2.43
PCDHA2-201ENST00000378132 SHROOM4Q9ULL8 1493 aa30.03■■■□□ 2.4
PCDHA2-201ENST00000378132 ZCCHC6Q5VYS8 1495 aaKnown RBP30■■■□□ 2.39
PCDHA2-201ENST00000378132 SUPT5HO00267 1087 aaKnown RBP29.45■■■□□ 2.31
PCDHA2-201ENST00000378132 DCAF1Q9Y4B6 1507 aa29.16■■■□□ 2.26
PCDHA2-201ENST00000378132 DCAF8L2P0C7V8 631 aa29.12■■■□□ 2.25
PCDHA2-201ENST00000378132 CHIC1Q5VXU3 224 aa28.73■■■□□ 2.19
PCDHA2-201ENST00000378132 MYO15BQ96JP2 1530 aa28.66■■■□□ 2.18
PCDHA2-201ENST00000378132 ABCC9O60706 1549 aa28.35■■■□□ 2.13
PCDHA2-201ENST00000378132 SCRIBQ14160 1630 aa28.21■■■□□ 2.11
PCDHA2-201ENST00000378132 RSF1Q96T23 1441 aaPredicted RBP28■■■□□ 2.07
PCDHA2-201ENST00000378132 HRCP23327 699 aa27.92■■■□□ 2.06
PCDHA2-201ENST00000378132 NACADO15069 1562 aa27.89■■■□□ 2.05
PCDHA2-201ENST00000378132 PCGF6Q9BYE7 350 aa27.81■■■□□ 2.04
PCDHA2-201ENST00000378132 LOC105371045A0A1W2PR82 267 aa27.79■■■□□ 2.04
PCDHA2-201ENST00000378132 RB1CC1Q8TDY2 1594 aa27.78■■■□□ 2.04
PCDHA2-201ENST00000378132 CECR2Q9BXF3 1484 aa27.55■■■□□ 2
PCDHA2-201ENST00000378132 MROH2BQ7Z745 1585 aa27.5■■□□□ 1.99
PCDHA2-201ENST00000378132 TRIM41Q8WV44 630 aa27.5■■□□□ 1.99
PCDHA2-201ENST00000378132 WIZO95785 1651 aa27.39■■□□□ 1.98
PCDHA2-201ENST00000378132 TRIM26Q12899 539 aaPredicted RBP27.37■■□□□ 1.97
PCDHA2-201ENST00000378132 BAZ1AQ9NRL2 1556 aaPredicted RBP27.29■■□□□ 1.96
PCDHA2-201ENST00000378132 PPARGC1BQ86YN6 1023 aaKnown RBP27.22■■□□□ 1.95
PCDHA2-201ENST00000378132 FAM9AQ8IZU1 332 aaPredicted RBP27.19■■□□□ 1.94
PCDHA2-201ENST00000378132 EIF4G1Q04637 1599 aaKnown RBP27.11■■□□□ 1.93
PCDHA2-201ENST00000378132 UNC13AQ9UPW8 1703 aa27.06■■□□□ 1.92
PCDHA2-201ENST00000378132 SMARCA4P51532 1647 aa27.01■■□□□ 1.91
PCDHA2-201ENST00000378132 TOP2AP11388 1531 aaKnown RBP27■■□□□ 1.91
PCDHA2-201ENST00000378132 EHMT2Q96KQ7 1210 aa26.88■■□□□ 1.89
PCDHA2-201ENST00000378132 SMARCA2P51531 1590 aa26.84■■□□□ 1.89
PCDHA2-201ENST00000378132 ZEB1P37275 1124 aaPredicted RBP26.84■■□□□ 1.89
PCDHA2-201ENST00000378132 CCDC88BA6NC98 1476 aa26.82■■□□□ 1.88
PCDHA2-201ENST00000378132 ABCC8Q09428 1581 aa26.75■■□□□ 1.87
PCDHA2-201ENST00000378132 BICRAQ9NZM4 1560 aa26.64■■□□□ 1.86
PCDHA2-201ENST00000378132 PEG3Q9GZU2 1588 aa26.53■■□□□ 1.84
PCDHA2-201ENST00000378132 PABPN1Q86U42 306 aaKnown RBP eCLIP26.47■■□□□ 1.83
PCDHA2-201ENST00000378132 EEA1Q15075 1411 aa26.47■■□□□ 1.83
PCDHA2-201ENST00000378132 SOGA1O94964 1423 aa26.46■■□□□ 1.83
PCDHA2-201ENST00000378132 WRNQ14191 1432 aaPredicted RBP eCLIP26.44■■□□□ 1.82
PCDHA2-201ENST00000378132 CEP162Q5TB80 1403 aa26.41■■□□□ 1.82
PCDHA2-201ENST00000378132 TNIKQ9UKE5 1360 aa26.38■■□□□ 1.81
PCDHA2-201ENST00000378132 RUSC2Q8N2Y8 1516 aa26.32■■□□□ 1.8
PCDHA2-201ENST00000378132 CSRNP3Q8WYN3 585 aa26.31■■□□□ 1.8
PCDHA2-201ENST00000378132 GOLGA3Q08378 1498 aa26.25■■□□□ 1.79
PCDHA2-201ENST00000378132 ATAD2BQ9ULI0 1458 aa26.25■■□□□ 1.79
PCDHA2-201ENST00000378132 SYNJ1O43426 1573 aa26.21■■□□□ 1.79
PCDHA2-201ENST00000378132 BAZ1BQ9UIG0 1483 aaKnown RBP26.19■■□□□ 1.78
PCDHA2-201ENST00000378132 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.18■■□□□ 1.78
PCDHA2-201ENST00000378132 UBTFP17480 764 aaKnown RBP26.17■■□□□ 1.78
PCDHA2-201ENST00000378132 CCER1Q8TC90 406 aaPredicted RBP26.16■■□□□ 1.78
PCDHA2-201ENST00000378132 KIF21BO75037 1637 aa26.13■■□□□ 1.77
PCDHA2-201ENST00000378132 CEP164Q9UPV0 1460 aa26.11■■□□□ 1.77
PCDHA2-201ENST00000378132 TTBK1Q5TCY1 1321 aaPredicted RBP26.06■■□□□ 1.76
PCDHA2-201ENST00000378132 TOP2BQ02880 1626 aa25.93■■□□□ 1.74
PCDHA2-201ENST00000378132 CLIP1P30622 1438 aa25.91■■□□□ 1.74
PCDHA2-201ENST00000378132 BIVM-ERCC5R4GMW8 1640 aa25.88■■□□□ 1.73
PCDHA2-201ENST00000378132 RAPGEF2Q9Y4G8 1499 aa25.85■■□□□ 1.73
PCDHA2-201ENST00000378132 VPS8Q8N3P4 1428 aa25.83■■□□□ 1.73
PCDHA2-201ENST00000378132 HMGXB3Q12766 1538 aa25.82■■□□□ 1.72
PCDHA2-201ENST00000378132 NCAPD3P42695 1498 aa25.75■■□□□ 1.71
PCDHA2-201ENST00000378132 ERICH3Q5RHP9 1530 aa25.7■■□□□ 1.7
PCDHA2-201ENST00000378132 SCAF1Q9H7N4 1312 aaKnown RBP25.68■■□□□ 1.7
PCDHA2-201ENST00000378132 DIEXFQ68CQ4 756 aaKnown RBP25.67■■□□□ 1.7
PCDHA2-201ENST00000378132 PRXQ9BXM0 1461 aa25.64■■□□□ 1.69
PCDHA2-201ENST00000378132 APLP2Q06481 763 aa25.64■■□□□ 1.69
PCDHA2-201ENST00000378132 CUX1P39880 1505 aa25.62■■□□□ 1.69
PCDHA2-201ENST00000378132 HNRNPUL2Q1KMD3 747 aaKnown RBP25.58■■□□□ 1.69
PCDHA2-201ENST00000378132 CFTRP13569 1480 aa25.55■■□□□ 1.68
PCDHA2-201ENST00000378132 RANGAP1P46060 587 aaPredicted RBP25.54■■□□□ 1.68
PCDHA2-201ENST00000378132 PRDM2Q13029 1718 aa25.52■■□□□ 1.68
PCDHA2-201ENST00000378132 ARAP1Q96P48 1450 aa25.51■■□□□ 1.67
PCDHA2-201ENST00000378132 KIF27Q86VH2 1401 aa25.51■■□□□ 1.67
PCDHA2-201ENST00000378132 ZNF316A6NFI3 1004 aaPredicted RBP25.5■■□□□ 1.67
PCDHA2-201ENST00000378132 PELP1Q8IZL8 1130 aaKnown RBP25.5■■□□□ 1.67
PCDHA2-201ENST00000378132 ACIN1Q9UKV3 1341 aaKnown RBP25.49■■□□□ 1.67
PCDHA2-201ENST00000378132 NEUROD1Q13562 356 aa25.4■■□□□ 1.66
PCDHA2-201ENST00000378132 CENPBP07199 599 aaPredicted RBP25.38■■□□□ 1.65
PCDHA2-201ENST00000378132 ARHGAP35Q9NRY4 1499 aa25.28■■□□□ 1.64
PCDHA2-201ENST00000378132 KANK4Q5T7N3 995 aaPredicted RBP25.27■■□□□ 1.64
PCDHA2-201ENST00000378132 RRBP1Q9P2E9 1410 aaKnown RBP25.24■■□□□ 1.63
PCDHA2-201ENST00000378132 CLSPNQ9HAW4 1339 aa25.23■■□□□ 1.63
PCDHA2-201ENST00000378132 CUX2O14529 1486 aa25.23■■□□□ 1.63
PCDHA2-201ENST00000378132 CADPSQ9ULU8 1353 aa25.22■■□□□ 1.63
PCDHA2-201ENST00000378132 DHX57Q6P158 1386 aaKnown RBP25.19■■□□□ 1.62
PCDHA2-201ENST00000378132 IGF1RP08069 1367 aa25.18■■□□□ 1.62
PCDHA2-201ENST00000378132 FGD5Q6ZNL6 1462 aa25.15■■□□□ 1.62
PCDHA2-201ENST00000378132 GTF3C3Q9Y5Q9 886 aa25.15■■□□□ 1.62
PCDHA2-201ENST00000378132 CCNB3Q8WWL7 1395 aa25.1■■□□□ 1.61
PCDHA2-201ENST00000378132 MIER1Q8N108 512 aa25.09■■□□□ 1.61
PCDHA2-201ENST00000378132 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.61
PCDHA2-201ENST00000378132 CARMIL1Q5VZK9 1371 aa25.08■■□□□ 1.61
PCDHA2-201ENST00000378132 MAP3K1Q13233 1512 aa25.07■■□□□ 1.6
PCDHA2-201ENST00000378132 TIAM1Q13009 1591 aa25.07■■□□□ 1.6
PCDHA2-201ENST00000378132 FANCD2Q9BXW9 1451 aa25■■□□□ 1.59
PCDHA2-201ENST00000378132 YTHDC1Q96MU7 727 aaKnown RBP24.99■■□□□ 1.59
PCDHA2-201ENST00000378132 DNMBPQ6XZF7 1577 aa24.96■■□□□ 1.59
PCDHA2-201ENST00000378132 CFAP43Q8NDM7 1665 aa24.94■■□□□ 1.58
PCDHA2-201ENST00000378132 LRRC9Q6ZRR7 1453 aa24.93■■□□□ 1.58
PCDHA2-201ENST00000378132 FHAD1B1AJZ9 1412 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms