RNA–Protein interactions for RNA: ENST00000377619.9

COMMD6-204, Transcript of COMM domain containing 6, humanhuman

TSL 2 BASIC

Gene COMMD6, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-204ENST00000377619 AEBP2Q6ZN18 517 aaPredicted RBP28.65■■■□□ 2.18
COMMD6-204ENST00000377619 CHIC1Q5VXU3 224 aa27.09■■□□□ 1.93
COMMD6-204ENST00000377619 SENP3Q9H4L4 574 aaPredicted RBP24.42■■□□□ 1.5
COMMD6-204ENST00000377619 PHF23Q9BUL5 403 aaPredicted RBP24.14■■□□□ 1.45
COMMD6-204ENST00000377619 FOXD1Q16676 465 aa22.81■■□□□ 1.24
COMMD6-204ENST00000377619 PLPPR3Q6T4P5 718 aa21.58■■□□□ 1.05
COMMD6-204ENST00000377619 MSH5O43196 834 aa21.35■■□□□ 1.01
COMMD6-204ENST00000377619 PIAS4Q8N2W9 510 aaPredicted RBP21.28■■□□□ 1
COMMD6-204ENST00000377619 PPP6R1Q9UPN7 881 aa21.28■■□□□ 1
COMMD6-204ENST00000377619 ADRA2BP18089 450 aa21.2■□□□□ 0.98
COMMD6-204ENST00000377619 POTEDQ86YR6 584 aa21.06■□□□□ 0.96
COMMD6-204ENST00000377619 MAPK8IP2Q13387 824 aaPredicted RBP19.52■□□□□ 0.72
COMMD6-204ENST00000377619 SCAF1Q9H7N4 1312 aaKnown RBP19.36■□□□□ 0.69
COMMD6-204ENST00000377619 DMRT2Q9Y5R5 561 aa19.35■□□□□ 0.69
COMMD6-204ENST00000377619 PPP4R3CPQ6ZMV5 832 aa18.93■□□□□ 0.62
COMMD6-204ENST00000377619 DCAF8L1A6NGE4 600 aa18.62■□□□□ 0.57
COMMD6-204ENST00000377619 HOXD11P31277 338 aaPredicted RBP18.6■□□□□ 0.57
COMMD6-204ENST00000377619 CNKSR2Q8WXI2 1034 aa18.58■□□□□ 0.56
COMMD6-204ENST00000377619 CACNB1Q02641 598 aaPredicted RBP18.43■□□□□ 0.54
COMMD6-204ENST00000377619 RNF216Q9NWF9 866 aaPredicted RBP18.43■□□□□ 0.54
COMMD6-204ENST00000377619 RNF39Q9H2S5 420 aa18.22■□□□□ 0.51
COMMD6-204ENST00000377619 NCBP3Q53F19 620 aaKnown RBP18.15■□□□□ 0.5
COMMD6-204ENST00000377619 C1QBPQ07021 282 aaKnown RBP17.95■□□□□ 0.46
COMMD6-204ENST00000377619 DNAJC5BQ9UF47 199 aa17.94■□□□□ 0.46
COMMD6-204ENST00000377619 NPM3O75607 178 aaKnown RBP17.9■□□□□ 0.46
COMMD6-204ENST00000377619 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.76■□□□□ 0.43
COMMD6-204ENST00000377619 KCNA4P22459 653 aa17.48■□□□□ 0.39
COMMD6-204ENST00000377619 U3KPZ7 1027 aaPredicted RBP17.35■□□□□ 0.37
COMMD6-204ENST00000377619 SPINK5Q9NQ38 1064 aaPredicted RBP17.16■□□□□ 0.34
COMMD6-204ENST00000377619 CAPN15O75808 1086 aa17.13■□□□□ 0.33
COMMD6-204ENST00000377619 SLC4A2P04920 1241 aa17.13■□□□□ 0.33
COMMD6-204ENST00000377619 DSG3P32926 999 aa17.04■□□□□ 0.32
COMMD6-204ENST00000377619 TRHP20396 242 aaPredicted RBP16.84■□□□□ 0.29
COMMD6-204ENST00000377619 APLP2Q06481 763 aa16.82■□□□□ 0.28
COMMD6-204ENST00000377619 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.79■□□□□ 0.28
COMMD6-204ENST00000377619 HNRNPUL2Q1KMD3 747 aaKnown RBP16.79■□□□□ 0.28
COMMD6-204ENST00000377619 ZNF219Q9P2Y4 722 aaPredicted RBP16.75■□□□□ 0.27
COMMD6-204ENST00000377619 ABCB7O75027 752 aa16.73■□□□□ 0.27
COMMD6-204ENST00000377619 SAMD1Q6SPF0 538 aaPredicted RBP16.7■□□□□ 0.26
COMMD6-204ENST00000377619 MYCNP04198 464 aaPredicted RBP16.53■□□□□ 0.24
COMMD6-204ENST00000377619 POTEHQ6S545 545 aa16.48■□□□□ 0.23
COMMD6-204ENST00000377619 SLC4A1APQ9BWU0 796 aaKnown RBP16.47■□□□□ 0.23
COMMD6-204ENST00000377619 POLA2Q14181 598 aa16.37■□□□□ 0.21
COMMD6-204ENST00000377619 FOXD4L1Q9NU39 408 aa16.31■□□□□ 0.2
COMMD6-204ENST00000377619 RBM42Q9BTD8 480 aaKnown RBP16.23■□□□□ 0.19
COMMD6-204ENST00000377619 ATF5Q9Y2D1 282 aaPredicted RBP16.21■□□□□ 0.19
COMMD6-204ENST00000377619 ZBTB22O15209 634 aa16.06■□□□□ 0.16
COMMD6-204ENST00000377619 CHRDL2Q6WN34 429 aa15.95■□□□□ 0.14
COMMD6-204ENST00000377619 ZBTB12Q9Y330 459 aaPredicted RBP15.95■□□□□ 0.14
COMMD6-204ENST00000377619 AKT1S1Q96B36 256 aa15.85■□□□□ 0.13
COMMD6-204ENST00000377619 OSCARQ8IYS5 282 aa15.81■□□□□ 0.12
COMMD6-204ENST00000377619 ATXN8OSP0DMR3 200 aa15.8■□□□□ 0.12
COMMD6-204ENST00000377619 REM2Q8IYK8 340 aaPredicted RBP15.73■□□□□ 0.11
COMMD6-204ENST00000377619 PITPNM1O00562 1244 aa15.55■□□□□ 0.08
COMMD6-204ENST00000377619 FBLN2P98095 1184 aa15.55■□□□□ 0.08
COMMD6-204ENST00000377619 PIP4P2Q8N4L2 257 aa15.55■□□□□ 0.08
COMMD6-204ENST00000377619 SPDYE2BA6NHP3 402 aa15.47■□□□□ 0.07
COMMD6-204ENST00000377619 SPDYE6P0CI01 402 aa15.47■□□□□ 0.07
COMMD6-204ENST00000377619 SPDYE2Q495Y8 402 aa15.47■□□□□ 0.07
COMMD6-204ENST00000377619 MKRN4PQ13434 485 aaPredicted RBP15.44■□□□□ 0.06
COMMD6-204ENST00000377619 FXR2P51116 673 aaKnown RBP eCLIP15.43■□□□□ 0.06
COMMD6-204ENST00000377619 SP7Q8TDD2 431 aaPredicted RBP15.39■□□□□ 0.05
COMMD6-204ENST00000377619 HAX1O00165 279 aa15.32■□□□□ 0.04
COMMD6-204ENST00000377619 ZNF692Q9BU19 519 aaPredicted RBP15.31■□□□□ 0.04
COMMD6-204ENST00000377619 CLEC11AQ9Y240 323 aa15.27■□□□□ 0.04
COMMD6-204ENST00000377619 SSUH2Q9Y2M2 353 aa15.25■□□□□ 0.03
COMMD6-204ENST00000377619 SPDYE1Q8NFV5 336 aaPredicted RBP15.24■□□□□ 0.03
COMMD6-204ENST00000377619 CSRNP3Q8WYN3 585 aa15.23■□□□□ 0.03
COMMD6-204ENST00000377619 PRKAR2AP13861 404 aaKnown RBP15.16■□□□□ 0.02
COMMD6-204ENST00000377619 EVX2Q03828 476 aa15.14■□□□□ 0.01
COMMD6-204ENST00000377619 PABPN1Q86U42 306 aaKnown RBP eCLIP15.08■□□□□ 0
COMMD6-204ENST00000377619 CHADLQ6NUI6 762 aa14.99□□□□□ -0.01
COMMD6-204ENST00000377619 PRR29P0C7W0 189 aa14.98□□□□□ -0.01
COMMD6-204ENST00000377619 EHMT2Q96KQ7 1210 aa14.98□□□□□ -0.01
COMMD6-204ENST00000377619 C19orf67A6NJJ6 358 aa14.94□□□□□ -0.02
COMMD6-204ENST00000377619 GABBR2O75899 941 aa14.77□□□□□ -0.05
COMMD6-204ENST00000377619 FARP1Q9Y4F1 1045 aaPredicted RBP14.73□□□□□ -0.05
COMMD6-204ENST00000377619 SPDYE4A6NLX3 237 aa14.66□□□□□ -0.06
COMMD6-204ENST00000377619 CD44P16070 742 aaKnown RBP14.66□□□□□ -0.06
COMMD6-204ENST00000377619 STAG3Q9UJ98 1225 aa14.62□□□□□ -0.07
COMMD6-204ENST00000377619 CREBZFQ9NS37 354 aa14.58□□□□□ -0.08
COMMD6-204ENST00000377619 POTEIP0CG38 1075 aa14.46□□□□□ -0.09
COMMD6-204ENST00000377619 LHX8Q68G74 356 aa14.46□□□□□ -0.09
COMMD6-204ENST00000377619 ZRANB1Q9UGI0 708 aa14.46□□□□□ -0.09
COMMD6-204ENST00000377619 CLCN6P51797 869 aa14.44□□□□□ -0.1
COMMD6-204ENST00000377619 ZNF579Q8NAF0 562 aaKnown RBP14.4□□□□□ -0.1
COMMD6-204ENST00000377619 DCBLD2Q96PD2 775 aa14.35□□□□□ -0.11
COMMD6-204ENST00000377619 MNX1P50219 401 aaPredicted RBP14.31□□□□□ -0.12
COMMD6-204ENST00000377619 PAK3O75914 559 aaPredicted RBP14.29□□□□□ -0.12
COMMD6-204ENST00000377619 NPM1P06748 294 aaKnown RBP eCLIP14.29□□□□□ -0.12
COMMD6-204ENST00000377619 GALR2O43603 387 aaPredicted RBP14.27□□□□□ -0.13
COMMD6-204ENST00000377619 PROM2Q8N271 834 aa14.24□□□□□ -0.13
COMMD6-204ENST00000377619 PHF12Q96QT6 1004 aa14.24□□□□□ -0.13
COMMD6-204ENST00000377619 TSPYL2Q9H2G4 693 aaPredicted RBP14.07□□□□□ -0.16
COMMD6-204ENST00000377619 MS4A3Q96HJ5 214 aa14.04□□□□□ -0.16
COMMD6-204ENST00000377619 PELP1Q8IZL8 1130 aaKnown RBP14.03□□□□□ -0.16
COMMD6-204ENST00000377619 MIER1Q8N108 512 aa14.03□□□□□ -0.16
COMMD6-204ENST00000377619 POTEB2H3BUK9 544 aa14□□□□□ -0.17
COMMD6-204ENST00000377619 PLEKHG5O94827 1062 aa13.98□□□□□ -0.17
COMMD6-204ENST00000377619 CCDC61Q9Y6R9 512 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms