RNA–Protein interactions for RNA: ENST00000377190.7

SYVN1-203, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 3,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-203ENST00000377190 NISCHQ9Y2I1 1504 aa34.8■■■■□ 3.16
SYVN1-203ENST00000377190 SHROOM4Q9ULL8 1493 aa30.58■■■□□ 2.49
SYVN1-203ENST00000377190 SUPT5HO00267 1087 aaKnown RBP30.03■■■□□ 2.4
SYVN1-203ENST00000377190 DCAF8L2P0C7V8 631 aa29.9■■■□□ 2.38
SYVN1-203ENST00000377190 ZCCHC6Q5VYS8 1495 aaKnown RBP29.36■■■□□ 2.29
SYVN1-203ENST00000377190 CCDC180Q9P1Z9 1646 aa29.16■■■□□ 2.26
SYVN1-203ENST00000377190 CHIC1Q5VXU3 224 aa28.83■■■□□ 2.21
SYVN1-203ENST00000377190 MYO15BQ96JP2 1530 aa28.71■■■□□ 2.19
SYVN1-203ENST00000377190 PCGF6Q9BYE7 350 aa28.33■■■□□ 2.13
SYVN1-203ENST00000377190 LOC105371045A0A1W2PR82 267 aa28.32■■■□□ 2.12
SYVN1-203ENST00000377190 DCAF1Q9Y4B6 1507 aa28.15■■■□□ 2.1
SYVN1-203ENST00000377190 HRCP23327 699 aa28.01■■■□□ 2.07
SYVN1-203ENST00000377190 SCRIBQ14160 1630 aa27.99■■■□□ 2.07
SYVN1-203ENST00000377190 EHMT2Q96KQ7 1210 aa27.98■■■□□ 2.07
SYVN1-203ENST00000377190 FAM9AQ8IZU1 332 aaPredicted RBP27.89■■■□□ 2.06
SYVN1-203ENST00000377190 PPARGC1BQ86YN6 1023 aaKnown RBP27.88■■■□□ 2.05
SYVN1-203ENST00000377190 ABCC9O60706 1549 aa27.81■■■□□ 2.04
SYVN1-203ENST00000377190 RSF1Q96T23 1441 aaPredicted RBP27.73■■■□□ 2.03
SYVN1-203ENST00000377190 TRIM41Q8WV44 630 aa27.71■■■□□ 2.03
SYVN1-203ENST00000377190 RB1CC1Q8TDY2 1594 aa27.48■■□□□ 1.99
SYVN1-203ENST00000377190 CECR2Q9BXF3 1484 aa27.45■■□□□ 1.98
SYVN1-203ENST00000377190 TRIM26Q12899 539 aaPredicted RBP27.4■■□□□ 1.98
SYVN1-203ENST00000377190 MROH2BQ7Z745 1585 aa27.24■■□□□ 1.95
SYVN1-203ENST00000377190 NACADO15069 1562 aa27.13■■□□□ 1.93
SYVN1-203ENST00000377190 WIZO95785 1651 aa27.09■■□□□ 1.93
SYVN1-203ENST00000377190 TTBK1Q5TCY1 1321 aaPredicted RBP27.02■■□□□ 1.92
SYVN1-203ENST00000377190 PABPN1Q86U42 306 aaKnown RBP eCLIP26.89■■□□□ 1.9
SYVN1-203ENST00000377190 ABCC8Q09428 1581 aa26.68■■□□□ 1.86
SYVN1-203ENST00000377190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.67■■□□□ 1.86
SYVN1-203ENST00000377190 BAZ1AQ9NRL2 1556 aaPredicted RBP26.67■■□□□ 1.86
SYVN1-203ENST00000377190 ZEB1P37275 1124 aaPredicted RBP26.64■■□□□ 1.86
SYVN1-203ENST00000377190 CCDC88BA6NC98 1476 aa26.57■■□□□ 1.84
SYVN1-203ENST00000377190 UBTFP17480 764 aaKnown RBP26.52■■□□□ 1.84
SYVN1-203ENST00000377190 CCER1Q8TC90 406 aaPredicted RBP26.52■■□□□ 1.84
SYVN1-203ENST00000377190 SOGA1O94964 1423 aa26.48■■□□□ 1.83
SYVN1-203ENST00000377190 SMARCA4P51532 1647 aa26.46■■□□□ 1.83
SYVN1-203ENST00000377190 TOP2AP11388 1531 aaKnown RBP26.43■■□□□ 1.82
SYVN1-203ENST00000377190 RANGAP1P46060 587 aaPredicted RBP26.41■■□□□ 1.82
SYVN1-203ENST00000377190 EIF4G1Q04637 1599 aaKnown RBP26.38■■□□□ 1.81
SYVN1-203ENST00000377190 RUSC2Q8N2Y8 1516 aa26.37■■□□□ 1.81
SYVN1-203ENST00000377190 SMARCA2P51531 1590 aa26.37■■□□□ 1.81
SYVN1-203ENST00000377190 UNC13AQ9UPW8 1703 aa26.34■■□□□ 1.81
SYVN1-203ENST00000377190 CSRNP3Q8WYN3 585 aa26.32■■□□□ 1.8
SYVN1-203ENST00000377190 CEP162Q5TB80 1403 aa26.28■■□□□ 1.8
SYVN1-203ENST00000377190 BICRAQ9NZM4 1560 aa26.1■■□□□ 1.77
SYVN1-203ENST00000377190 WRNQ14191 1432 aaPredicted RBP eCLIP26.09■■□□□ 1.77
SYVN1-203ENST00000377190 HNRNPUL2Q1KMD3 747 aaKnown RBP26.08■■□□□ 1.76
SYVN1-203ENST00000377190 TNIKQ9UKE5 1360 aa26.08■■□□□ 1.76
SYVN1-203ENST00000377190 SCAF1Q9H7N4 1312 aaKnown RBP26.01■■□□□ 1.75
SYVN1-203ENST00000377190 GOLGA3Q08378 1498 aa25.93■■□□□ 1.74
SYVN1-203ENST00000377190 DIEXFQ68CQ4 756 aaKnown RBP25.91■■□□□ 1.74
SYVN1-203ENST00000377190 BAZ1BQ9UIG0 1483 aaKnown RBP25.89■■□□□ 1.74
SYVN1-203ENST00000377190 ATAD2BQ9ULI0 1458 aa25.88■■□□□ 1.73
SYVN1-203ENST00000377190 SYNJ1O43426 1573 aa25.88■■□□□ 1.73
SYVN1-203ENST00000377190 EEA1Q15075 1411 aa25.88■■□□□ 1.73
SYVN1-203ENST00000377190 APLP2Q06481 763 aa25.85■■□□□ 1.73
SYVN1-203ENST00000377190 CLIP1P30622 1438 aa25.8■■□□□ 1.72
SYVN1-203ENST00000377190 NEUROD1Q13562 356 aa25.75■■□□□ 1.71
SYVN1-203ENST00000377190 RAPGEF2Q9Y4G8 1499 aa25.75■■□□□ 1.71
SYVN1-203ENST00000377190 CEP164Q9UPV0 1460 aa25.74■■□□□ 1.71
SYVN1-203ENST00000377190 YTHDC1Q96MU7 727 aaKnown RBP25.69■■□□□ 1.7
SYVN1-203ENST00000377190 PEG3Q9GZU2 1588 aa25.67■■□□□ 1.7
SYVN1-203ENST00000377190 ACIN1Q9UKV3 1341 aaKnown RBP25.63■■□□□ 1.69
SYVN1-203ENST00000377190 ZNF316A6NFI3 1004 aaPredicted RBP25.59■■□□□ 1.69
SYVN1-203ENST00000377190 VPS8Q8N3P4 1428 aa25.55■■□□□ 1.68
SYVN1-203ENST00000377190 GTF3C3Q9Y5Q9 886 aa25.52■■□□□ 1.68
SYVN1-203ENST00000377190 ITGAEP38570 1179 aa25.51■■□□□ 1.67
SYVN1-203ENST00000377190 KIF21BO75037 1637 aa25.5■■□□□ 1.67
SYVN1-203ENST00000377190 KANK4Q5T7N3 995 aaPredicted RBP25.48■■□□□ 1.67
SYVN1-203ENST00000377190 CENPBP07199 599 aaPredicted RBP25.47■■□□□ 1.67
SYVN1-203ENST00000377190 MIER1Q8N108 512 aa25.41■■□□□ 1.66
SYVN1-203ENST00000377190 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
SYVN1-203ENST00000377190 ATP1B4Q9UN42 357 aaPredicted RBP25.3■■□□□ 1.64
SYVN1-203ENST00000377190 CUX1P39880 1505 aa25.3■■□□□ 1.64
SYVN1-203ENST00000377190 P3H3Q8IVL6 736 aa25.27■■□□□ 1.64
SYVN1-203ENST00000377190 KIF27Q86VH2 1401 aa25.25■■□□□ 1.63
SYVN1-203ENST00000377190 ARAP1Q96P48 1450 aa25.24■■□□□ 1.63
SYVN1-203ENST00000377190 PRXQ9BXM0 1461 aa25.24■■□□□ 1.63
SYVN1-203ENST00000377190 NCAPD3P42695 1498 aa25.23■■□□□ 1.63
SYVN1-203ENST00000377190 BIVM-ERCC5R4GMW8 1640 aa25.16■■□□□ 1.62
SYVN1-203ENST00000377190 CUX2O14529 1486 aa25.12■■□□□ 1.61
SYVN1-203ENST00000377190 CFTRP13569 1480 aa25.1■■□□□ 1.61
SYVN1-203ENST00000377190 DHX57Q6P158 1386 aaKnown RBP25.1■■□□□ 1.61
SYVN1-203ENST00000377190 HMGXB3Q12766 1538 aa25.08■■□□□ 1.61
SYVN1-203ENST00000377190 ERICH3Q5RHP9 1530 aa25.07■■□□□ 1.6
SYVN1-203ENST00000377190 PELP1Q8IZL8 1130 aaKnown RBP25.05■■□□□ 1.6
SYVN1-203ENST00000377190 ARHGAP35Q9NRY4 1499 aa25.04■■□□□ 1.6
SYVN1-203ENST00000377190 FAM50AQ14320 339 aaKnown RBP25.04■■□□□ 1.6
SYVN1-203ENST00000377190 IGF1RP08069 1367 aa25.02■■□□□ 1.6
SYVN1-203ENST00000377190 CCNB3Q8WWL7 1395 aa24.98■■□□□ 1.59
SYVN1-203ENST00000377190 CARMIL1Q5VZK9 1371 aa24.97■■□□□ 1.59
SYVN1-203ENST00000377190 CADPSQ9ULU8 1353 aa24.95■■□□□ 1.58
SYVN1-203ENST00000377190 FGD5Q6ZNL6 1462 aa24.91■■□□□ 1.58
SYVN1-203ENST00000377190 RRBP1Q9P2E9 1410 aaKnown RBP24.86■■□□□ 1.57
SYVN1-203ENST00000377190 SIN3AQ96ST3 1273 aa24.85■■□□□ 1.57
SYVN1-203ENST00000377190 RAB3GAP2Q9H2M9 1393 aa24.84■■□□□ 1.57
SYVN1-203ENST00000377190 RAD54L2Q9Y4B4 1467 aa24.83■■□□□ 1.57
SYVN1-203ENST00000377190 HIRIP3Q9BW71 556 aaPredicted RBP24.82■■□□□ 1.56
SYVN1-203ENST00000377190 CLSPNQ9HAW4 1339 aa24.79■■□□□ 1.56
SYVN1-203ENST00000377190 PHLDB1Q86UU1 1377 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms