RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 AEBP2Q6ZN18 517 aaPredicted RBP18.14■□□□□ 0.49
SSX1-201ENST00000376919 CHIC1Q5VXU3 224 aa18.09■□□□□ 0.49
SSX1-201ENST00000376919 PHF23Q9BUL5 403 aaPredicted RBP15.94■□□□□ 0.14
SSX1-201ENST00000376919 SENP3Q9H4L4 574 aaPredicted RBP15.34■□□□□ 0.05
SSX1-201ENST00000376919 PLPPR3Q6T4P5 718 aa14.85□□□□□ -0.03
SSX1-201ENST00000376919 FOXD1Q16676 465 aa14.19□□□□□ -0.14
SSX1-201ENST00000376919 ADRA2BP18089 450 aa13.95□□□□□ -0.18
SSX1-201ENST00000376919 PPP6R1Q9UPN7 881 aa13.94□□□□□ -0.18
SSX1-201ENST00000376919 PIAS4Q8N2W9 510 aaPredicted RBP13.46□□□□□ -0.25
SSX1-201ENST00000376919 KCNA4P22459 653 aa13.25□□□□□ -0.29
SSX1-201ENST00000376919 NISCHQ9Y2I1 1504 aa13.17□□□□□ -0.3
SSX1-201ENST00000376919 PPP4R3CPQ6ZMV5 832 aa13.13□□□□□ -0.31
SSX1-201ENST00000376919 MSH5O43196 834 aa12.93□□□□□ -0.34
SSX1-201ENST00000376919 NCBP3Q53F19 620 aaKnown RBP12.89□□□□□ -0.35
SSX1-201ENST00000376919 EHMT2Q96KQ7 1210 aa12.88□□□□□ -0.35
SSX1-201ENST00000376919 POTEDQ86YR6 584 aa12.81□□□□□ -0.36
SSX1-201ENST00000376919 SCAF1Q9H7N4 1312 aaKnown RBP12.77□□□□□ -0.37
SSX1-201ENST00000376919 NPM3O75607 178 aaKnown RBP12.7□□□□□ -0.38
SSX1-201ENST00000376919 CNKSR2Q8WXI2 1034 aa12.69□□□□□ -0.38
SSX1-201ENST00000376919 SLC4A1APQ9BWU0 796 aaKnown RBP12.68□□□□□ -0.38
SSX1-201ENST00000376919 MAPK8IP2Q13387 824 aaPredicted RBP12.54□□□□□ -0.4
SSX1-201ENST00000376919 CSRNP3Q8WYN3 585 aa12.44□□□□□ -0.42
SSX1-201ENST00000376919 RNF216Q9NWF9 866 aaPredicted RBP12.34□□□□□ -0.43
SSX1-201ENST00000376919 DNAJC5BQ9UF47 199 aa12.32□□□□□ -0.44
SSX1-201ENST00000376919 DMRT2Q9Y5R5 561 aa12.31□□□□□ -0.44
SSX1-201ENST00000376919 HOXD11P31277 338 aaPredicted RBP12.2□□□□□ -0.46
SSX1-201ENST00000376919 ZBTB22O15209 634 aa12.19□□□□□ -0.46
SSX1-201ENST00000376919 FOXD4L1Q9NU39 408 aa12.09□□□□□ -0.47
SSX1-201ENST00000376919 SLC4A2P04920 1241 aa11.91□□□□□ -0.5
SSX1-201ENST00000376919 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
SSX1-201ENST00000376919 CCDC180Q9P1Z9 1646 aa11.76□□□□□ -0.53
SSX1-201ENST00000376919 MYCNP04198 464 aaPredicted RBP11.73□□□□□ -0.53
SSX1-201ENST00000376919 DCAF8L1A6NGE4 600 aa11.72□□□□□ -0.53
SSX1-201ENST00000376919 ATXN8OSP0DMR3 200 aa11.65□□□□□ -0.54
SSX1-201ENST00000376919 AMER1Q5JTC6 1135 aaPredicted RBP11.63□□□□□ -0.55
SSX1-201ENST00000376919 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.61□□□□□ -0.55
SSX1-201ENST00000376919 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
SSX1-201ENST00000376919 U3KPZ7 1027 aaPredicted RBP11.47□□□□□ -0.57
SSX1-201ENST00000376919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.46□□□□□ -0.57
SSX1-201ENST00000376919 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.57
SSX1-201ENST00000376919 SAMD1Q6SPF0 538 aaPredicted RBP11.44□□□□□ -0.58
SSX1-201ENST00000376919 ABCC9O60706 1549 aa11.4□□□□□ -0.58
SSX1-201ENST00000376919 ATF5Q9Y2D1 282 aaPredicted RBP11.39□□□□□ -0.59
SSX1-201ENST00000376919 APLP2Q06481 763 aa11.25□□□□□ -0.61
SSX1-201ENST00000376919 FKBP8Q14318 412 aa11.2□□□□□ -0.62
SSX1-201ENST00000376919 ZNF219Q9P2Y4 722 aaPredicted RBP11.17□□□□□ -0.62
SSX1-201ENST00000376919 RNF39Q9H2S5 420 aa11.12□□□□□ -0.63
SSX1-201ENST00000376919 DCAF8L2P0C7V8 631 aa11.06□□□□□ -0.64
SSX1-201ENST00000376919 SPINK5Q9NQ38 1064 aaPredicted RBP11.03□□□□□ -0.64
SSX1-201ENST00000376919 RB1CC1Q8TDY2 1594 aa11.03□□□□□ -0.64
SSX1-201ENST00000376919 C1QBPQ07021 282 aaKnown RBP11.01□□□□□ -0.65
SSX1-201ENST00000376919 ZCCHC6Q5VYS8 1495 aaKnown RBP11□□□□□ -0.65
SSX1-201ENST00000376919 TRHP20396 242 aaPredicted RBP11□□□□□ -0.65
SSX1-201ENST00000376919 NACADO15069 1562 aa10.99□□□□□ -0.65
SSX1-201ENST00000376919 CAPN15O75808 1086 aa10.96□□□□□ -0.65
SSX1-201ENST00000376919 MKRN4PQ13434 485 aaPredicted RBP10.92□□□□□ -0.66
SSX1-201ENST00000376919 POLA2Q14181 598 aa10.91□□□□□ -0.66
SSX1-201ENST00000376919 FBLN2P98095 1184 aa10.89□□□□□ -0.67
SSX1-201ENST00000376919 MYO15BQ96JP2 1530 aa10.89□□□□□ -0.67
SSX1-201ENST00000376919 DCAF1Q9Y4B6 1507 aa10.88□□□□□ -0.67
SSX1-201ENST00000376919 SPDYE4A6NLX3 237 aa10.84□□□□□ -0.67
SSX1-201ENST00000376919 UNC13AQ9UPW8 1703 aa10.79□□□□□ -0.68
SSX1-201ENST00000376919 ABCB7O75027 752 aa10.78□□□□□ -0.68
SSX1-201ENST00000376919 ZBTB12Q9Y330 459 aaPredicted RBP10.78□□□□□ -0.68
SSX1-201ENST00000376919 SCRIBQ14160 1630 aa10.76□□□□□ -0.69
SSX1-201ENST00000376919 PROM2Q8N271 834 aa10.75□□□□□ -0.69
SSX1-201ENST00000376919 FBXO3Q9UK99 471 aa10.72□□□□□ -0.69
SSX1-201ENST00000376919 DSG3P32926 999 aa10.71□□□□□ -0.69
SSX1-201ENST00000376919 PLCB2Q00722 1185 aa10.67□□□□□ -0.7
SSX1-201ENST00000376919 PABPN1Q86U42 306 aaKnown RBP eCLIP10.62□□□□□ -0.71
SSX1-201ENST00000376919 BICRAQ9NZM4 1560 aa10.6□□□□□ -0.71
SSX1-201ENST00000376919 VASPP50552 380 aaPredicted RBP10.56□□□□□ -0.72
SSX1-201ENST00000376919 CACNB1Q02641 598 aaPredicted RBP10.55□□□□□ -0.72
SSX1-201ENST00000376919 SHROOM4Q9ULL8 1493 aa10.54□□□□□ -0.72
SSX1-201ENST00000376919 OSCARQ8IYS5 282 aa10.53□□□□□ -0.72
SSX1-201ENST00000376919 SPDYE2BA6NHP3 402 aa10.52□□□□□ -0.73
SSX1-201ENST00000376919 SPDYE6P0CI01 402 aa10.52□□□□□ -0.73
SSX1-201ENST00000376919 SPDYE2Q495Y8 402 aa10.52□□□□□ -0.73
SSX1-201ENST00000376919 ZNF692Q9BU19 519 aaPredicted RBP10.52□□□□□ -0.73
SSX1-201ENST00000376919 HAP1P54257 671 aaPredicted RBP10.51□□□□□ -0.73
SSX1-201ENST00000376919 BCANQ96GW7 911 aa10.51□□□□□ -0.73
SSX1-201ENST00000376919 SSUH2Q9Y2M2 353 aa10.48□□□□□ -0.73
SSX1-201ENST00000376919 IFNLR1Q8IU57 520 aaPredicted RBP10.44□□□□□ -0.74
SSX1-201ENST00000376919 VSIG10Q8N0Z9 540 aa10.38□□□□□ -0.75
SSX1-201ENST00000376919 STAG3Q9UJ98 1225 aa10.38□□□□□ -0.75
SSX1-201ENST00000376919 TAOK2Q9UL54 1235 aa10.38□□□□□ -0.75
SSX1-201ENST00000376919 PRKCSHP14314 528 aaPredicted RBP10.37□□□□□ -0.75
SSX1-201ENST00000376919 EIF4G1Q04637 1599 aaKnown RBP10.37□□□□□ -0.75
SSX1-201ENST00000376919 CC2D2AQ9P2K1 1620 aa10.32□□□□□ -0.76
SSX1-201ENST00000376919 KLHL34Q8N239 644 aa10.27□□□□□ -0.77
SSX1-201ENST00000376919 PLCD3Q8N3E9 789 aa10.26□□□□□ -0.77
SSX1-201ENST00000376919 SPOCK2Q92563 424 aa10.26□□□□□ -0.77
SSX1-201ENST00000376919 BAZ1AQ9NRL2 1556 aaPredicted RBP10.26□□□□□ -0.77
SSX1-201ENST00000376919 SMARCA4P51532 1647 aa10.25□□□□□ -0.77
SSX1-201ENST00000376919 PKD2Q13563 968 aa10.24□□□□□ -0.77
SSX1-201ENST00000376919 CECR2Q9BXF3 1484 aa10.23□□□□□ -0.77
SSX1-201ENST00000376919 MIER1Q8N108 512 aa10.23□□□□□ -0.77
SSX1-201ENST00000376919 TPRNQ4KMQ1 711 aa10.21□□□□□ -0.77
SSX1-201ENST00000376919 RBM42Q9BTD8 480 aaKnown RBP10.19□□□□□ -0.78
SSX1-201ENST00000376919 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms