RNA–Protein interactions for RNA: ENST00000375022.8

TRO-203, Transcript of trophinin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRO, Length 2,306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-203ENST00000375022 NISCHQ9Y2I1 1504 aa26.95■■□□□ 1.9
TRO-203ENST00000375022 SHROOM4Q9ULL8 1493 aa23.19■■□□□ 1.3
TRO-203ENST00000375022 CCDC180Q9P1Z9 1646 aa22.78■■□□□ 1.24
TRO-203ENST00000375022 SUPT5HO00267 1087 aaKnown RBP22.76■■□□□ 1.23
TRO-203ENST00000375022 ZCCHC6Q5VYS8 1495 aaKnown RBP22.76■■□□□ 1.23
TRO-203ENST00000375022 DCAF8L2P0C7V8 631 aa22.64■■□□□ 1.21
TRO-203ENST00000375022 CHIC1Q5VXU3 224 aa22.03■■□□□ 1.12
TRO-203ENST00000375022 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
TRO-203ENST00000375022 MYO15BQ96JP2 1530 aa21.91■■□□□ 1.1
TRO-203ENST00000375022 SCRIBQ14160 1630 aa21.52■■□□□ 1.04
TRO-203ENST00000375022 LOC105371045A0A1W2PR82 267 aa21.47■■□□□ 1.03
TRO-203ENST00000375022 ABCC9O60706 1549 aa21.46■■□□□ 1.03
TRO-203ENST00000375022 PCGF6Q9BYE7 350 aa21.44■■□□□ 1.02
TRO-203ENST00000375022 RSF1Q96T23 1441 aaPredicted RBP21.37■■□□□ 1.01
TRO-203ENST00000375022 HRCP23327 699 aa21.35■■□□□ 1.01
TRO-203ENST00000375022 TRIM41Q8WV44 630 aa21.16■□□□□ 0.98
TRO-203ENST00000375022 NACADO15069 1562 aa21.14■□□□□ 0.97
TRO-203ENST00000375022 RB1CC1Q8TDY2 1594 aa21.12■□□□□ 0.97
TRO-203ENST00000375022 CECR2Q9BXF3 1484 aa21.09■□□□□ 0.97
TRO-203ENST00000375022 FAM9AQ8IZU1 332 aaPredicted RBP21.07■□□□□ 0.96
TRO-203ENST00000375022 PPARGC1BQ86YN6 1023 aaKnown RBP21.01■□□□□ 0.95
TRO-203ENST00000375022 MROH2BQ7Z745 1585 aa20.99■□□□□ 0.95
TRO-203ENST00000375022 EHMT2Q96KQ7 1210 aa20.96■□□□□ 0.95
TRO-203ENST00000375022 TRIM26Q12899 539 aaPredicted RBP20.95■□□□□ 0.94
TRO-203ENST00000375022 WIZO95785 1651 aa20.86■□□□□ 0.93
TRO-203ENST00000375022 BAZ1AQ9NRL2 1556 aaPredicted RBP20.68■□□□□ 0.9
TRO-203ENST00000375022 PABPN1Q86U42 306 aaKnown RBP eCLIP20.5■□□□□ 0.874e-7■■□□□ 14.5
TRO-203ENST00000375022 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
TRO-203ENST00000375022 TOP2AP11388 1531 aaKnown RBP20.49■□□□□ 0.87
TRO-203ENST00000375022 CCDC88BA6NC98 1476 aa20.48■□□□□ 0.87
TRO-203ENST00000375022 EIF4G1Q04637 1599 aaKnown RBP20.47■□□□□ 0.87
TRO-203ENST00000375022 ZEB1P37275 1124 aaPredicted RBP20.45■□□□□ 0.86
TRO-203ENST00000375022 ABCC8Q09428 1581 aa20.44■□□□□ 0.86
TRO-203ENST00000375022 UNC13AQ9UPW8 1703 aa20.44■□□□□ 0.86
TRO-203ENST00000375022 SMARCA2P51531 1590 aa20.39■□□□□ 0.85
TRO-203ENST00000375022 SOGA1O94964 1423 aa20.28■□□□□ 0.84
TRO-203ENST00000375022 TTBK1Q5TCY1 1321 aaPredicted RBP20.27■□□□□ 0.84
TRO-203ENST00000375022 BICRAQ9NZM4 1560 aa20.24■□□□□ 0.83
TRO-203ENST00000375022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.2■□□□□ 0.82
TRO-203ENST00000375022 CSRNP3Q8WYN3 585 aa20.19■□□□□ 0.82
TRO-203ENST00000375022 RUSC2Q8N2Y8 1516 aa20.18■□□□□ 0.82
TRO-203ENST00000375022 UBTFP17480 764 aaKnown RBP20.18■□□□□ 0.82
TRO-203ENST00000375022 CEP162Q5TB80 1403 aa20.16■□□□□ 0.82
TRO-203ENST00000375022 CCER1Q8TC90 406 aaPredicted RBP20.13■□□□□ 0.81
TRO-203ENST00000375022 TNIKQ9UKE5 1360 aa20.1■□□□□ 0.81
TRO-203ENST00000375022 WRNQ14191 1432 aaPredicted RBP eCLIP20.09■□□□□ 0.81
TRO-203ENST00000375022 EEA1Q15075 1411 aa20.07■□□□□ 0.8
TRO-203ENST00000375022 PEG3Q9GZU2 1588 aa20.04■□□□□ 0.8
TRO-203ENST00000375022 ATAD2BQ9ULI0 1458 aa20.02■□□□□ 0.8
TRO-203ENST00000375022 GOLGA3Q08378 1498 aa19.98■□□□□ 0.79
TRO-203ENST00000375022 BAZ1BQ9UIG0 1483 aaKnown RBP19.98■□□□□ 0.79
TRO-203ENST00000375022 SYNJ1O43426 1573 aa19.95■□□□□ 0.78
TRO-203ENST00000375022 RANGAP1P46060 587 aaPredicted RBP19.88■□□□□ 0.77
TRO-203ENST00000375022 CEP164Q9UPV0 1460 aa19.86■□□□□ 0.77
TRO-203ENST00000375022 CLIP1P30622 1438 aa19.79■□□□□ 0.76
TRO-203ENST00000375022 KIF21BO75037 1637 aa19.77■□□□□ 0.75
TRO-203ENST00000375022 RAPGEF2Q9Y4G8 1499 aa19.76■□□□□ 0.75
TRO-203ENST00000375022 HNRNPUL2Q1KMD3 747 aaKnown RBP19.75■□□□□ 0.75
TRO-203ENST00000375022 APLP2Q06481 763 aa19.72■□□□□ 0.75
TRO-203ENST00000375022 DIEXFQ68CQ4 756 aaKnown RBP19.7■□□□□ 0.74
TRO-203ENST00000375022 SCAF1Q9H7N4 1312 aaKnown RBP19.7■□□□□ 0.74
TRO-203ENST00000375022 VPS8Q8N3P4 1428 aa19.67■□□□□ 0.74
TRO-203ENST00000375022 TOP2BQ02880 1626 aa19.66■□□□□ 0.74
TRO-203ENST00000375022 NCAPD3P42695 1498 aa19.6■□□□□ 0.73
TRO-203ENST00000375022 BIVM-ERCC5R4GMW8 1640 aa19.55■□□□□ 0.72
TRO-203ENST00000375022 HMGXB3Q12766 1538 aa19.54■□□□□ 0.72
TRO-203ENST00000375022 ZNF316A6NFI3 1004 aaPredicted RBP19.53■□□□□ 0.72
TRO-203ENST00000375022 CUX1P39880 1505 aa19.52■□□□□ 0.72
TRO-203ENST00000375022 NEUROD1Q13562 356 aa19.51■□□□□ 0.71
TRO-203ENST00000375022 PRXQ9BXM0 1461 aa19.51■□□□□ 0.71
TRO-203ENST00000375022 ACIN1Q9UKV3 1341 aaKnown RBP19.5■□□□□ 0.71
TRO-203ENST00000375022 KIF27Q86VH2 1401 aa19.46■□□□□ 0.71
TRO-203ENST00000375022 CFTRP13569 1480 aa19.46■□□□□ 0.71
TRO-203ENST00000375022 ERICH3Q5RHP9 1530 aa19.45■□□□□ 0.7
TRO-203ENST00000375022 KANK4Q5T7N3 995 aaPredicted RBP19.45■□□□□ 0.7
TRO-203ENST00000375022 ARAP1Q96P48 1450 aa19.44■□□□□ 0.7
TRO-203ENST00000375022 CENPBP07199 599 aaPredicted RBP19.4■□□□□ 0.7
TRO-203ENST00000375022 YTHDC1Q96MU7 727 aaKnown RBP19.33■□□□□ 0.68
TRO-203ENST00000375022 GTF3C3Q9Y5Q9 886 aa19.33■□□□□ 0.68
TRO-203ENST00000375022 CUX2O14529 1486 aa19.3■□□□□ 0.68
TRO-203ENST00000375022 MIER1Q8N108 512 aa19.29■□□□□ 0.68
TRO-203ENST00000375022 CADPSQ9ULU8 1353 aa19.28■□□□□ 0.68
TRO-203ENST00000375022 ARHGAP35Q9NRY4 1499 aa19.28■□□□□ 0.68
TRO-203ENST00000375022 ITGAEP38570 1179 aa19.28■□□□□ 0.68
TRO-203ENST00000375022 IGF1RP08069 1367 aa19.27■□□□□ 0.68
TRO-203ENST00000375022 DHX57Q6P158 1386 aaKnown RBP19.24■□□□□ 0.67
TRO-203ENST00000375022 PELP1Q8IZL8 1130 aaKnown RBP19.2■□□□□ 0.66
TRO-203ENST00000375022 CARMIL1Q5VZK9 1371 aa19.2■□□□□ 0.66
TRO-203ENST00000375022 FGD5Q6ZNL6 1462 aa19.2■□□□□ 0.66
TRO-203ENST00000375022 RRBP1Q9P2E9 1410 aaKnown RBP19.19■□□□□ 0.66
TRO-203ENST00000375022 CCNB3Q8WWL7 1395 aa19.18■□□□□ 0.66
TRO-203ENST00000375022 P3H3Q8IVL6 736 aa19.16■□□□□ 0.66
TRO-203ENST00000375022 CLSPNQ9HAW4 1339 aa19.16■□□□□ 0.66
TRO-203ENST00000375022 PRDM2Q13029 1718 aa19.14■□□□□ 0.65
TRO-203ENST00000375022 ATP1B4Q9UN42 357 aaPredicted RBP19.13■□□□□ 0.65
TRO-203ENST00000375022 CC2D2AQ9P2K1 1620 aa19.12■□□□□ 0.65
TRO-203ENST00000375022 FANCD2Q9BXW9 1451 aa19.1■□□□□ 0.65
TRO-203ENST00000375022 RAD54L2Q9Y4B4 1467 aa19.06■□□□□ 0.64
TRO-203ENST00000375022 FAM50AQ14320 339 aaKnown RBP19.03■□□□□ 0.64
TRO-203ENST00000375022 TIAM1Q13009 1591 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms