RNA–Protein interactions for RNA: ENST00000374724.1

SLC44A1-203, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SLC44A1, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-203ENST00000374724 NISCHQ9Y2I1 1504 aa33.93■■■■□ 3.02
SLC44A1-203ENST00000374724 SHROOM4Q9ULL8 1493 aa29.24■■■□□ 2.27
SLC44A1-203ENST00000374724 CCDC180Q9P1Z9 1646 aa29.06■■■□□ 2.24
SLC44A1-203ENST00000374724 SUPT5HO00267 1087 aaKnown RBP28.72■■■□□ 2.19
SLC44A1-203ENST00000374724 ZCCHC6Q5VYS8 1495 aaKnown RBP28.67■■■□□ 2.18
SLC44A1-203ENST00000374724 DCAF8L2P0C7V8 631 aa28.53■■■□□ 2.16
SLC44A1-203ENST00000374724 CHIC1Q5VXU3 224 aa27.81■■■□□ 2.04
SLC44A1-203ENST00000374724 ABCC9O60706 1549 aa27.8■■■□□ 2.04
SLC44A1-203ENST00000374724 DCAF1Q9Y4B6 1507 aa27.7■■■□□ 2.03
SLC44A1-203ENST00000374724 MYO15BQ96JP2 1530 aa27.65■■■□□ 2.02
SLC44A1-203ENST00000374724 SCRIBQ14160 1630 aa27.17■■□□□ 1.94
SLC44A1-203ENST00000374724 LOC105371045A0A1W2PR82 267 aa27.1■■□□□ 1.93
SLC44A1-203ENST00000374724 NACADO15069 1562 aa27.08■■□□□ 1.93
SLC44A1-203ENST00000374724 PCGF6Q9BYE7 350 aa27.07■■□□□ 1.92
SLC44A1-203ENST00000374724 HRCP23327 699 aa26.96■■□□□ 1.91
SLC44A1-203ENST00000374724 RSF1Q96T23 1441 aaPredicted RBP26.93■■□□□ 1.9
SLC44A1-203ENST00000374724 RB1CC1Q8TDY2 1594 aa26.87■■□□□ 1.89
SLC44A1-203ENST00000374724 PPARGC1BQ86YN6 1023 aaKnown RBP26.81■■□□□ 1.88
SLC44A1-203ENST00000374724 TRIM41Q8WV44 630 aa26.67■■□□□ 1.86
SLC44A1-203ENST00000374724 CECR2Q9BXF3 1484 aa26.58■■□□□ 1.85
SLC44A1-203ENST00000374724 FAM9AQ8IZU1 332 aaPredicted RBP26.58■■□□□ 1.85
SLC44A1-203ENST00000374724 UNC13AQ9UPW8 1703 aa26.48■■□□□ 1.83
SLC44A1-203ENST00000374724 EHMT2Q96KQ7 1210 aa26.45■■□□□ 1.83
SLC44A1-203ENST00000374724 MROH2BQ7Z745 1585 aa26.44■■□□□ 1.82
SLC44A1-203ENST00000374724 TRIM26Q12899 539 aaPredicted RBP26.43■■□□□ 1.82
SLC44A1-203ENST00000374724 PABPN1Q86U42 306 aaKnown RBP eCLIP26.42■■□□□ 1.82
SLC44A1-203ENST00000374724 WIZO95785 1651 aa26.28■■□□□ 1.8
SLC44A1-203ENST00000374724 BICRAQ9NZM4 1560 aa26.18■■□□□ 1.78
SLC44A1-203ENST00000374724 BAZ1AQ9NRL2 1556 aaPredicted RBP26.03■■□□□ 1.76
SLC44A1-203ENST00000374724 SMARCA4P51532 1647 aa25.87■■□□□ 1.73
SLC44A1-203ENST00000374724 CCDC88BA6NC98 1476 aa25.8■■□□□ 1.72
SLC44A1-203ENST00000374724 ZEB1P37275 1124 aaPredicted RBP25.79■■□□□ 1.72
SLC44A1-203ENST00000374724 TOP2AP11388 1531 aaKnown RBP25.79■■□□□ 1.72
SLC44A1-203ENST00000374724 EIF4G1Q04637 1599 aaKnown RBP25.79■■□□□ 1.72
SLC44A1-203ENST00000374724 ABCC8Q09428 1581 aa25.77■■□□□ 1.72
SLC44A1-203ENST00000374724 SMARCA2P51531 1590 aa25.68■■□□□ 1.7
SLC44A1-203ENST00000374724 TTBK1Q5TCY1 1321 aaPredicted RBP25.58■■□□□ 1.68
SLC44A1-203ENST00000374724 SOGA1O94964 1423 aa25.57■■□□□ 1.68
SLC44A1-203ENST00000374724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.5■■□□□ 1.67
SLC44A1-203ENST00000374724 UBTFP17480 764 aaKnown RBP25.45■■□□□ 1.66
SLC44A1-203ENST00000374724 CSRNP3Q8WYN3 585 aa25.45■■□□□ 1.66
SLC44A1-203ENST00000374724 RUSC2Q8N2Y8 1516 aa25.44■■□□□ 1.66
SLC44A1-203ENST00000374724 SCAF1Q9H7N4 1312 aaKnown RBP25.44■■□□□ 1.66
SLC44A1-203ENST00000374724 ATAD2BQ9ULI0 1458 aa25.43■■□□□ 1.66
SLC44A1-203ENST00000374724 CEP162Q5TB80 1403 aa25.42■■□□□ 1.66
SLC44A1-203ENST00000374724 CCER1Q8TC90 406 aaPredicted RBP25.4■■□□□ 1.66
SLC44A1-203ENST00000374724 PEG3Q9GZU2 1588 aa25.37■■□□□ 1.65
SLC44A1-203ENST00000374724 TNIKQ9UKE5 1360 aa25.34■■□□□ 1.65
SLC44A1-203ENST00000374724 BAZ1BQ9UIG0 1483 aaKnown RBP25.32■■□□□ 1.64
SLC44A1-203ENST00000374724 WRNQ14191 1432 aaPredicted RBP eCLIP25.31■■□□□ 1.64
SLC44A1-203ENST00000374724 EEA1Q15075 1411 aa25.28■■□□□ 1.64
SLC44A1-203ENST00000374724 GOLGA3Q08378 1498 aa25.17■■□□□ 1.62
SLC44A1-203ENST00000374724 SYNJ1O43426 1573 aa25.13■■□□□ 1.61
SLC44A1-203ENST00000374724 PELP1Q8IZL8 1130 aaKnown RBP25.12■■□□□ 1.61
SLC44A1-203ENST00000374724 RANGAP1P46060 587 aaPredicted RBP25.07■■□□□ 1.6
SLC44A1-203ENST00000374724 NCAPD3P42695 1498 aa25.07■■□□□ 1.6
SLC44A1-203ENST00000374724 CEP164Q9UPV0 1460 aa25.02■■□□□ 1.6
SLC44A1-203ENST00000374724 CC2D2AQ9P2K1 1620 aa25■■□□□ 1.59
SLC44A1-203ENST00000374724 HMGXB3Q12766 1538 aa24.99■■□□□ 1.59
SLC44A1-203ENST00000374724 CLIP1P30622 1438 aa24.95■■□□□ 1.59
SLC44A1-203ENST00000374724 HNRNPUL2Q1KMD3 747 aaKnown RBP24.92■■□□□ 1.58
SLC44A1-203ENST00000374724 RAPGEF2Q9Y4G8 1499 aa24.91■■□□□ 1.58
SLC44A1-203ENST00000374724 KIF21BO75037 1637 aa24.89■■□□□ 1.58
SLC44A1-203ENST00000374724 DIEXFQ68CQ4 756 aaKnown RBP24.87■■□□□ 1.57
SLC44A1-203ENST00000374724 NEUROD1Q13562 356 aa24.87■■□□□ 1.57
SLC44A1-203ENST00000374724 APLP2Q06481 763 aa24.85■■□□□ 1.57
SLC44A1-203ENST00000374724 VPS8Q8N3P4 1428 aa24.8■■□□□ 1.56
SLC44A1-203ENST00000374724 TOP2BQ02880 1626 aa24.76■■□□□ 1.55
SLC44A1-203ENST00000374724 GTF3C3Q9Y5Q9 886 aa24.74■■□□□ 1.55
SLC44A1-203ENST00000374724 ACIN1Q9UKV3 1341 aaKnown RBP24.73■■□□□ 1.55
SLC44A1-203ENST00000374724 DNAJC5BQ9UF47 199 aa24.72■■□□□ 1.55
SLC44A1-203ENST00000374724 ZNF316A6NFI3 1004 aaPredicted RBP24.65■■□□□ 1.54
SLC44A1-203ENST00000374724 CFTRP13569 1480 aa24.62■■□□□ 1.53
SLC44A1-203ENST00000374724 BIVM-ERCC5R4GMW8 1640 aa24.61■■□□□ 1.53
SLC44A1-203ENST00000374724 CUX1P39880 1505 aa24.59■■□□□ 1.53
SLC44A1-203ENST00000374724 PRXQ9BXM0 1461 aa24.58■■□□□ 1.53
SLC44A1-203ENST00000374724 YTHDC1Q96MU7 727 aaKnown RBP24.57■■□□□ 1.52
SLC44A1-203ENST00000374724 CADPSQ9ULU8 1353 aa24.55■■□□□ 1.52
SLC44A1-203ENST00000374724 KANK4Q5T7N3 995 aaPredicted RBP24.52■■□□□ 1.52
SLC44A1-203ENST00000374724 KIF27Q86VH2 1401 aa24.51■■□□□ 1.51
SLC44A1-203ENST00000374724 ERICH3Q5RHP9 1530 aa24.5■■□□□ 1.51
SLC44A1-203ENST00000374724 NESP48681 1621 aa24.49■■□□□ 1.51
SLC44A1-203ENST00000374724 CENPBP07199 599 aaPredicted RBP24.49■■□□□ 1.51
SLC44A1-203ENST00000374724 ARAP1Q96P48 1450 aa24.49■■□□□ 1.51
SLC44A1-203ENST00000374724 PRDM2Q13029 1718 aa24.37■■□□□ 1.49
SLC44A1-203ENST00000374724 MIER1Q8N108 512 aa24.36■■□□□ 1.49
SLC44A1-203ENST00000374724 FANCD2Q9BXW9 1451 aa24.32■■□□□ 1.48
SLC44A1-203ENST00000374724 CUX2O14529 1486 aa24.31■■□□□ 1.48
SLC44A1-203ENST00000374724 ITGAEP38570 1179 aa24.31■■□□□ 1.48
SLC44A1-203ENST00000374724 ARHGAP35Q9NRY4 1499 aa24.3■■□□□ 1.48
SLC44A1-203ENST00000374724 IGF1RP08069 1367 aa24.29■■□□□ 1.48
SLC44A1-203ENST00000374724 DHX57Q6P158 1386 aaKnown RBP24.27■■□□□ 1.48
SLC44A1-203ENST00000374724 CARMIL1Q5VZK9 1371 aa24.2■■□□□ 1.46
SLC44A1-203ENST00000374724 RRBP1Q9P2E9 1410 aaKnown RBP24.19■■□□□ 1.46
SLC44A1-203ENST00000374724 CCNB3Q8WWL7 1395 aa24.18■■□□□ 1.46
SLC44A1-203ENST00000374724 FGD5Q6ZNL6 1462 aa24.17■■□□□ 1.46
SLC44A1-203ENST00000374724 CLSPNQ9HAW4 1339 aa24.16■■□□□ 1.46
SLC44A1-203ENST00000374724 P3H3Q8IVL6 736 aa24.16■■□□□ 1.46
SLC44A1-203ENST00000374724 LAMC3Q9Y6N6 1575 aa24.15■■□□□ 1.46
SLC44A1-203ENST00000374724 ATP1B4Q9UN42 357 aaPredicted RBP24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms