RNA–Protein interactions for RNA: ENST00000374688.5

TMEM38B-201, Transcript of transmembrane protein 38B, humanhuman

TSL 2 BASIC

Gene TMEM38B, Length 3,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-201ENST00000374688 CHIC1Q5VXU3 224 aa10.19□□□□□ -0.78
TMEM38B-201ENST00000374688 AEBP2Q6ZN18 517 aaPredicted RBP10.11□□□□□ -0.79
TMEM38B-201ENST00000374688 PHF23Q9BUL5 403 aaPredicted RBP8.9□□□□□ -0.98
TMEM38B-201ENST00000374688 SENP3Q9H4L4 574 aaPredicted RBP8.6□□□□□ -1.03
TMEM38B-201ENST00000374688 PLPPR3Q6T4P5 718 aa8.23□□□□□ -1.09
TMEM38B-201ENST00000374688 FOXD1Q16676 465 aa7.87□□□□□ -1.15
TMEM38B-201ENST00000374688 DNAJC5BQ9UF47 199 aa7.67□□□□□ -1.18
TMEM38B-201ENST00000374688 SLC24A1O60721 1099 aa7.61□□□□□ -1.19
TMEM38B-201ENST00000374688 PPP6R1Q9UPN7 881 aa7.6□□□□□ -1.19
TMEM38B-201ENST00000374688 ADRA2BP18089 450 aa7.46□□□□□ -1.22
TMEM38B-201ENST00000374688 MSH5O43196 834 aa7.34□□□□□ -1.23
TMEM38B-201ENST00000374688 MYT1Q01538 1121 aa7.33□□□□□ -1.24
TMEM38B-201ENST00000374688 PELP1Q8IZL8 1130 aaKnown RBP7.23□□□□□ -1.25
TMEM38B-201ENST00000374688 PIAS4Q8N2W9 510 aaPredicted RBP7.21□□□□□ -1.26
TMEM38B-201ENST00000374688 PPP4R3CPQ6ZMV5 832 aa7.18□□□□□ -1.26
TMEM38B-201ENST00000374688 TTBK1Q5TCY1 1321 aaPredicted RBP7.15□□□□□ -1.26
TMEM38B-201ENST00000374688 CNKSR2Q8WXI2 1034 aa7.11□□□□□ -1.27
TMEM38B-201ENST00000374688 NCBP3Q53F19 620 aaKnown RBP7.1□□□□□ -1.27
TMEM38B-201ENST00000374688 SCAF1Q9H7N4 1312 aaKnown RBP7.06□□□□□ -1.28
TMEM38B-201ENST00000374688 KCNA4P22459 653 aa7.06□□□□□ -1.28
TMEM38B-201ENST00000374688 HOXD11P31277 338 aaPredicted RBP7.06□□□□□ -1.28
TMEM38B-201ENST00000374688 RNF216Q9NWF9 866 aaPredicted RBP7.03□□□□□ -1.28
TMEM38B-201ENST00000374688 ERICH6Q7L0X2 663 aa7.02□□□□□ -1.29
TMEM38B-201ENST00000374688 DMRT2Q9Y5R5 561 aa7.02□□□□□ -1.29
TMEM38B-201ENST00000374688 DAXXQ9UER7 740 aaPredicted RBP7.01□□□□□ -1.29
TMEM38B-201ENST00000374688 NPM3O75607 178 aaKnown RBP6.97□□□□□ -1.29
TMEM38B-201ENST00000374688 PRKCSHP14314 528 aaPredicted RBP6.94□□□□□ -1.3
TMEM38B-201ENST00000374688 EHMT2Q96KQ7 1210 aa6.9□□□□□ -1.3
TMEM38B-201ENST00000374688 APLP2Q06481 763 aa6.84□□□□□ -1.31
TMEM38B-201ENST00000374688 ATXN8OSP0DMR3 200 aa6.75□□□□□ -1.33
TMEM38B-201ENST00000374688 SLC4A1APQ9BWU0 796 aaKnown RBP6.74□□□□□ -1.33
TMEM38B-201ENST00000374688 CSRNP3Q8WYN3 585 aa6.71□□□□□ -1.33
TMEM38B-201ENST00000374688 MAPK8IP2Q13387 824 aaPredicted RBP6.69□□□□□ -1.34
TMEM38B-201ENST00000374688 RTN4Q9NQC3 1192 aaKnown RBP6.69□□□□□ -1.34
TMEM38B-201ENST00000374688 ZBTB22O15209 634 aa6.64□□□□□ -1.35
TMEM38B-201ENST00000374688 RANGAP1P46060 587 aaPredicted RBP6.63□□□□□ -1.35
TMEM38B-201ENST00000374688 EIF5BO60841 1220 aaKnown RBP6.62□□□□□ -1.35
TMEM38B-201ENST00000374688 FOXD4L1Q9NU39 408 aa6.62□□□□□ -1.35
TMEM38B-201ENST00000374688 SLC4A2P04920 1241 aa6.62□□□□□ -1.35
TMEM38B-201ENST00000374688 ARXQ96QS3 562 aa6.52□□□□□ -1.37
TMEM38B-201ENST00000374688 MYCNP04198 464 aaPredicted RBP6.5□□□□□ -1.37
TMEM38B-201ENST00000374688 AMER1Q5JTC6 1135 aaPredicted RBP6.49□□□□□ -1.37
TMEM38B-201ENST00000374688 TIMELESSQ9UNS1 1208 aa6.45□□□□□ -1.38
TMEM38B-201ENST00000374688 BCL11AQ9H165 835 aa6.44□□□□□ -1.38
TMEM38B-201ENST00000374688 TULP1O00294 542 aaPredicted RBP6.41□□□□□ -1.38
TMEM38B-201ENST00000374688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.39□□□□□ -1.39
TMEM38B-201ENST00000374688 HNRNPUL2Q1KMD3 747 aaKnown RBP6.39□□□□□ -1.39
TMEM38B-201ENST00000374688 HOMEZQ8IX15 550 aa6.38□□□□□ -1.39
TMEM38B-201ENST00000374688 KLHL34Q8N239 644 aa6.37□□□□□ -1.39
TMEM38B-201ENST00000374688 PROM2Q8N271 834 aa6.35□□□□□ -1.39
TMEM38B-201ENST00000374688 PODXL2Q9NZ53 605 aa6.35□□□□□ -1.39
TMEM38B-201ENST00000374688 POTEDQ86YR6 584 aa6.34□□□□□ -1.39
TMEM38B-201ENST00000374688 PLEKHG5O94827 1062 aa6.34□□□□□ -1.39
TMEM38B-201ENST00000374688 U3KPZ7 1027 aaPredicted RBP6.34□□□□□ -1.39
TMEM38B-201ENST00000374688 SAMD1Q6SPF0 538 aaPredicted RBP6.34□□□□□ -1.39
TMEM38B-201ENST00000374688 RNF39Q9H2S5 420 aa6.33□□□□□ -1.4
TMEM38B-201ENST00000374688 C1QBPQ07021 282 aaKnown RBP6.27□□□□□ -1.41
TMEM38B-201ENST00000374688 TAOK2Q9UL54 1235 aa6.26□□□□□ -1.41
TMEM38B-201ENST00000374688 HRCP23327 699 aa6.26□□□□□ -1.41
TMEM38B-201ENST00000374688 FAM9AQ8IZU1 332 aaPredicted RBP6.25□□□□□ -1.41
TMEM38B-201ENST00000374688 TPRNQ4KMQ1 711 aa6.24□□□□□ -1.41
TMEM38B-201ENST00000374688 NPM2Q86SE8 214 aaKnown RBP6.2□□□□□ -1.42
TMEM38B-201ENST00000374688 BCANQ96GW7 911 aa6.19□□□□□ -1.42
TMEM38B-201ENST00000374688 C14orf37Q86TY3 774 aa6.17□□□□□ -1.42
TMEM38B-201ENST00000374688 CENPBP07199 599 aaPredicted RBP6.16□□□□□ -1.42
TMEM38B-201ENST00000374688 ATF5Q9Y2D1 282 aaPredicted RBP6.16□□□□□ -1.42
TMEM38B-201ENST00000374688 GTF3C3Q9Y5Q9 886 aa6.13□□□□□ -1.43
TMEM38B-201ENST00000374688 ZNF219Q9P2Y4 722 aaPredicted RBP6.12□□□□□ -1.43
TMEM38B-201ENST00000374688 PDIA4P13667 645 aaKnown RBP6.11□□□□□ -1.43
TMEM38B-201ENST00000374688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.1□□□□□ -1.43
TMEM38B-201ENST00000374688 NEFLP07196 543 aa6.07□□□□□ -1.44
TMEM38B-201ENST00000374688 DCAF8L2P0C7V8 631 aa6.07□□□□□ -1.44
TMEM38B-201ENST00000374688 PPARGC1BQ86YN6 1023 aaKnown RBP6.06□□□□□ -1.44
TMEM38B-201ENST00000374688 ZBTB12Q9Y330 459 aaPredicted RBP6.06□□□□□ -1.44
TMEM38B-201ENST00000374688 HAP1P54257 671 aaPredicted RBP6.06□□□□□ -1.44
TMEM38B-201ENST00000374688 UBE2Q2Q8WVN8 375 aa6.06□□□□□ -1.44
TMEM38B-201ENST00000374688 PDE4CQ08493 712 aa6.05□□□□□ -1.44
TMEM38B-201ENST00000374688 MKRN4PQ13434 485 aaPredicted RBP6.03□□□□□ -1.44
TMEM38B-201ENST00000374688 PKNOX2Q96KN3 472 aa6.02□□□□□ -1.45
TMEM38B-201ENST00000374688 FBXO3Q9UK99 471 aa6.01□□□□□ -1.45
TMEM38B-201ENST00000374688 DSG3P32926 999 aa5.98□□□□□ -1.45
TMEM38B-201ENST00000374688 PLCB2Q00722 1185 aa5.97□□□□□ -1.45
TMEM38B-201ENST00000374688 SSUH2Q9Y2M2 353 aa5.97□□□□□ -1.45
TMEM38B-201ENST00000374688 SUPT5HO00267 1087 aaKnown RBP5.97□□□□□ -1.45
TMEM38B-201ENST00000374688 CHMP4AQ9BY43 222 aa5.97□□□□□ -1.45
TMEM38B-201ENST00000374688 CDK11BP21127 795 aaKnown RBP5.96□□□□□ -1.45
TMEM38B-201ENST00000374688 CDK11AQ9UQ88 783 aaPredicted RBP5.96□□□□□ -1.45
TMEM38B-201ENST00000374688 TRIM26Q12899 539 aaPredicted RBP5.96□□□□□ -1.46
TMEM38B-201ENST00000374688 ANP32EQ9BTT0 268 aa5.96□□□□□ -1.46
TMEM38B-201ENST00000374688 ACIN1Q9UKV3 1341 aaKnown RBP5.94□□□□□ -1.46
TMEM38B-201ENST00000374688 LOC105371045A0A1W2PR82 267 aa5.94□□□□□ -1.46
TMEM38B-201ENST00000374688 TMEM132AQ24JP5 1023 aa5.94□□□□□ -1.46
TMEM38B-201ENST00000374688 TAF7LQ5H9L4 462 aa5.93□□□□□ -1.46
TMEM38B-201ENST00000374688 DHX37Q8IY37 1157 aaKnown RBP5.93□□□□□ -1.46
TMEM38B-201ENST00000374688 BRD2P25440 801 aaKnown RBP5.91□□□□□ -1.46
TMEM38B-201ENST00000374688 POLR3GLQ9BT43 218 aa5.9□□□□□ -1.46
TMEM38B-201ENST00000374688 PCGF6Q9BYE7 350 aa5.89□□□□□ -1.47
TMEM38B-201ENST00000374688 BCL11BQ9C0K0 894 aaPredicted RBP5.88□□□□□ -1.47
TMEM38B-201ENST00000374688 ANO8Q9HCE9 1232 aaPredicted RBP5.88□□□□□ -1.47
TMEM38B-201ENST00000374688 SPINK5Q9NQ38 1064 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms