RNA–Protein interactions for RNA: ENST00000374622.3

YIPF6-201, Transcript of Yip1 domain family member 6, humanhuman

TSL 2 BASIC

Gene YIPF6, Length 6,134 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF6-201ENST00000374622 DCAF8L2P0C7V8 631 aa23.25■■□□□ 1.31
YIPF6-201ENST00000374622 SUPT5HO00267 1087 aaKnown RBP21.84■■□□□ 1.09
YIPF6-201ENST00000374622 NISCHQ9Y2I1 1504 aa21.67■■□□□ 1.06
YIPF6-201ENST00000374622 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.03
YIPF6-201ENST00000374622 EHMT2Q96KQ7 1210 aa21.36■■□□□ 1.01
YIPF6-201ENST00000374622 APLP2Q06481 763 aa20.78■□□□□ 0.92
YIPF6-201ENST00000374622 FAM9AQ8IZU1 332 aaPredicted RBP20.68■□□□□ 0.9
YIPF6-201ENST00000374622 TTBK1Q5TCY1 1321 aaPredicted RBP20.59■□□□□ 0.89
YIPF6-201ENST00000374622 RANGAP1P46060 587 aaPredicted RBP20.45■□□□□ 0.86
YIPF6-201ENST00000374622 PELP1Q8IZL8 1130 aaKnown RBP20.39■□□□□ 0.86
YIPF6-201ENST00000374622 ATP1B4Q9UN42 357 aaPredicted RBP20.26■□□□□ 0.83
YIPF6-201ENST00000374622 PCGF6Q9BYE7 350 aa20.2■□□□□ 0.82
YIPF6-201ENST00000374622 TRIM41Q8WV44 630 aa20.17■□□□□ 0.82
YIPF6-201ENST00000374622 UBTFP17480 764 aaKnown RBP20.03■□□□□ 0.8
YIPF6-201ENST00000374622 CCER1Q8TC90 406 aaPredicted RBP19.94■□□□□ 0.78
YIPF6-201ENST00000374622 ZEB1P37275 1124 aaPredicted RBP19.72■□□□□ 0.75
YIPF6-201ENST00000374622 PPARGC1BQ86YN6 1023 aaKnown RBP19.71■□□□□ 0.75
YIPF6-201ENST00000374622 CENPBP07199 599 aaPredicted RBP19.7■□□□□ 0.74
YIPF6-201ENST00000374622 ERICH6Q7L0X2 663 aa19.65■□□□□ 0.74
YIPF6-201ENST00000374622 MYT1LQ9UL68 1186 aa19.57■□□□□ 0.72
YIPF6-201ENST00000374622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.55■□□□□ 0.72
YIPF6-201ENST00000374622 HNRNPUL2Q1KMD3 747 aaKnown RBP19.55■□□□□ 0.72
YIPF6-201ENST00000374622 YTHDC1Q96MU7 727 aaKnown RBP19.53■□□□□ 0.72
YIPF6-201ENST00000374622 ITGAEP38570 1179 aa19.47■□□□□ 0.71
YIPF6-201ENST00000374622 NEFLP07196 543 aa19.44■□□□□ 0.7
YIPF6-201ENST00000374622 POLR3GLQ9BT43 218 aa19.36■□□□□ 0.69
YIPF6-201ENST00000374622 CHIC1Q5VXU3 224 aa19.27■□□□□ 0.68
YIPF6-201ENST00000374622 TRIM26Q12899 539 aaPredicted RBP19.25■□□□□ 0.67
YIPF6-201ENST00000374622 LOC105371045A0A1W2PR82 267 aa19.23■□□□□ 0.67
YIPF6-201ENST00000374622 CNGB1Q14028 1251 aaPredicted RBP19.2■□□□□ 0.66
YIPF6-201ENST00000374622 PABPN1Q86U42 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
YIPF6-201ENST00000374622 ABCC9O60706 1549 aa19.08■□□□□ 0.65
YIPF6-201ENST00000374622 SLC4A1APQ9BWU0 796 aaKnown RBP19.06■□□□□ 0.64
YIPF6-201ENST00000374622 HRCP23327 699 aa18.96■□□□□ 0.63
YIPF6-201ENST00000374622 FAM50AQ14320 339 aaKnown RBP18.93■□□□□ 0.62
YIPF6-201ENST00000374622 DAXXQ9UER7 740 aaPredicted RBP18.92■□□□□ 0.62
YIPF6-201ENST00000374622 TRIM52Q96A61 297 aa18.85■□□□□ 0.61
YIPF6-201ENST00000374622 FBLN2P98095 1184 aa18.83■□□□□ 0.6
YIPF6-201ENST00000374622 NEUROD1Q13562 356 aa18.73■□□□□ 0.59
YIPF6-201ENST00000374622 ZNF326Q5BKZ1 582 aaKnown RBP18.66■□□□□ 0.58
YIPF6-201ENST00000374622 CLSPNQ9HAW4 1339 aa18.63■□□□□ 0.57
YIPF6-201ENST00000374622 ARID3CA6NKF2 412 aa18.61■□□□□ 0.57
YIPF6-201ENST00000374622 DIEXFQ68CQ4 756 aaKnown RBP18.6■□□□□ 0.57
YIPF6-201ENST00000374622 MYT1Q01538 1121 aa18.57■□□□□ 0.56
YIPF6-201ENST00000374622 P3H3Q8IVL6 736 aa18.56■□□□□ 0.56
YIPF6-201ENST00000374622 BCANQ96GW7 911 aa18.49■□□□□ 0.55
YIPF6-201ENST00000374622 ZNF316A6NFI3 1004 aaPredicted RBP18.48■□□□□ 0.55
YIPF6-201ENST00000374622 SLC24A1O60721 1099 aa18.43■□□□□ 0.54
YIPF6-201ENST00000374622 ZNF777Q9ULD5 760 aaPredicted RBP18.42■□□□□ 0.54
YIPF6-201ENST00000374622 ANP32CO43423 234 aa18.39■□□□□ 0.53
YIPF6-201ENST00000374622 BCL11AQ9H165 835 aa18.35■□□□□ 0.53
YIPF6-201ENST00000374622 RTL5Q5HYW3 569 aaPredicted RBP18.33■□□□□ 0.52
YIPF6-201ENST00000374622 CSRNP3Q8WYN3 585 aa18.32■□□□□ 0.52
YIPF6-201ENST00000374622 ZBTB47Q9UFB7 747 aaPredicted RBP18.31■□□□□ 0.52
YIPF6-201ENST00000374622 PLPPR3Q6T4P5 718 aa18.26■□□□□ 0.51
YIPF6-201ENST00000374622 CANXP27824 592 aaKnown RBP18.26■□□□□ 0.51
YIPF6-201ENST00000374622 ESF1Q9H501 851 aaKnown RBP18.24■□□□□ 0.51
YIPF6-201ENST00000374622 NEFMP07197 916 aa18.24■□□□□ 0.51
YIPF6-201ENST00000374622 CDK11AQ9UQ88 783 aaPredicted RBP18.23■□□□□ 0.51
YIPF6-201ENST00000374622 SCRIBQ14160 1630 aa18.23■□□□□ 0.51
YIPF6-201ENST00000374622 CHGAP10645 457 aaKnown RBP18.19■□□□□ 0.5
YIPF6-201ENST00000374622 STAG3Q9UJ98 1225 aa18.15■□□□□ 0.5
YIPF6-201ENST00000374622 NPM1P06748 294 aaKnown RBP eCLIP18.13■□□□□ 0.49
YIPF6-201ENST00000374622 GTF3C3Q9Y5Q9 886 aa18.11■□□□□ 0.49
YIPF6-201ENST00000374622 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.02■□□□□ 0.48
YIPF6-201ENST00000374622 CHIC2Q9UKJ5 165 aa18■□□□□ 0.47
YIPF6-201ENST00000374622 TONSLQ96HA7 1378 aa17.99■□□□□ 0.47
YIPF6-201ENST00000374622 CHMP7Q8WUX9 453 aaPredicted RBP17.9■□□□□ 0.46
YIPF6-201ENST00000374622 SALL2Q9Y467 1007 aaPredicted RBP17.88■□□□□ 0.45
YIPF6-201ENST00000374622 NPM2Q86SE8 214 aaKnown RBP17.88■□□□□ 0.45
YIPF6-201ENST00000374622 FAM9BQ8IZU0 186 aa17.85■□□□□ 0.45
YIPF6-201ENST00000374622 ZCCHC6Q5VYS8 1495 aaKnown RBP17.85■□□□□ 0.45
YIPF6-201ENST00000374622 KDM2AQ9Y2K7 1162 aa17.85■□□□□ 0.45
YIPF6-201ENST00000374622 DDX10Q13206 875 aaKnown RBP17.84■□□□□ 0.45
YIPF6-201ENST00000374622 TSPY4P0CV99 314 aa17.84■□□□□ 0.45
YIPF6-201ENST00000374622 TSPY10P0CW01 314 aa17.84■□□□□ 0.45
YIPF6-201ENST00000374622 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
YIPF6-201ENST00000374622 SCAF1Q9H7N4 1312 aaKnown RBP17.82■□□□□ 0.44
YIPF6-201ENST00000374622 HNRNPUQ00839 825 aaKnown RBP eCLIP17.81■□□□□ 0.44
YIPF6-201ENST00000374622 ANP32AP39687 249 aaKnown RBP17.8■□□□□ 0.44
YIPF6-201ENST00000374622 MTUS2Q5JR59 1369 aa17.8■□□□□ 0.44
YIPF6-201ENST00000374622 KCNH8Q96L42 1107 aa17.77■□□□□ 0.44
YIPF6-201ENST00000374622 ACIN1Q9UKV3 1341 aaKnown RBP17.76■□□□□ 0.43
YIPF6-201ENST00000374622 FKBP8Q14318 412 aa17.75■□□□□ 0.43
YIPF6-201ENST00000374622 PLEKHG5O94827 1062 aa17.75■□□□□ 0.43
YIPF6-201ENST00000374622 TMC1Q8TDI8 760 aa17.73■□□□□ 0.43
YIPF6-201ENST00000374622 A0A0G2JS52 829 aa17.71■□□□□ 0.43
YIPF6-201ENST00000374622 HSP90AA1P07900 732 aaKnown RBP17.71■□□□□ 0.43
YIPF6-201ENST00000374622 WDR43Q15061 677 aaKnown RBP eCLIP17.7■□□□□ 0.42
YIPF6-201ENST00000374622 ZBTB7CA1YPR0 619 aa17.69■□□□□ 0.42
YIPF6-201ENST00000374622 RRP7BPQ9NSQ0 103 aa17.69■□□□□ 0.42
YIPF6-201ENST00000374622 HIRIP3Q9BW71 556 aaPredicted RBP17.66■□□□□ 0.42
YIPF6-201ENST00000374622 PPP1R15AO75807 674 aaPredicted RBP17.65■□□□□ 0.42
YIPF6-201ENST00000374622 C14orf37Q86TY3 774 aa17.64■□□□□ 0.42
YIPF6-201ENST00000374622 CLIP1P30622 1438 aa17.64■□□□□ 0.41
YIPF6-201ENST00000374622 UPF2Q9HAU5 1272 aaKnown RBP17.63■□□□□ 0.41
YIPF6-201ENST00000374622 RB1CC1Q8TDY2 1594 aa17.63■□□□□ 0.41
YIPF6-201ENST00000374622 MRS2Q9HD23 443 aa17.62■□□□□ 0.41
YIPF6-201ENST00000374622 PLEKHD1A6NEE1 506 aa17.61■□□□□ 0.41
YIPF6-201ENST00000374622 CCDC180Q9P1Z9 1646 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms