RNA–Protein interactions for RNA: ENST00000374595.8

CTNNAL1-204, Transcript of catenin alpha like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTNNAL1, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNAL1-204ENST00000374595 NISCHQ9Y2I1 1504 aa36.64■■■■□ 3.46
CTNNAL1-204ENST00000374595 SHROOM4Q9ULL8 1493 aa31.35■■■□□ 2.61
CTNNAL1-204ENST00000374595 CCDC180Q9P1Z9 1646 aa31.15■■■□□ 2.58
CTNNAL1-204ENST00000374595 ZCCHC6Q5VYS8 1495 aaKnown RBP30.9■■■□□ 2.54
CTNNAL1-204ENST00000374595 DCAF8L2P0C7V8 631 aa30.84■■■□□ 2.53
CTNNAL1-204ENST00000374595 SUPT5HO00267 1087 aaKnown RBP30.57■■■□□ 2.49
CTNNAL1-204ENST00000374595 DCAF1Q9Y4B6 1507 aa29.89■■■□□ 2.38
CTNNAL1-204ENST00000374595 ABCC9O60706 1549 aa29.45■■■□□ 2.3
CTNNAL1-204ENST00000374595 CHIC1Q5VXU3 224 aa29.43■■■□□ 2.3
CTNNAL1-204ENST00000374595 SCRIBQ14160 1630 aa29.41■■■□□ 2.3
CTNNAL1-204ENST00000374595 MYO15BQ96JP2 1530 aa29.28■■■□□ 2.28
CTNNAL1-204ENST00000374595 RSF1Q96T23 1441 aaPredicted RBP28.94■■■□□ 2.22
CTNNAL1-204ENST00000374595 NACADO15069 1562 aa28.92■■■□□ 2.22
CTNNAL1-204ENST00000374595 CECR2Q9BXF3 1484 aa28.75■■■□□ 2.19
CTNNAL1-204ENST00000374595 LOC105371045A0A1W2PR82 267 aa28.7■■■□□ 2.19
CTNNAL1-204ENST00000374595 RB1CC1Q8TDY2 1594 aa28.63■■■□□ 2.17
CTNNAL1-204ENST00000374595 MROH2BQ7Z745 1585 aa28.56■■■□□ 2.16
CTNNAL1-204ENST00000374595 WIZO95785 1651 aa28.41■■■□□ 2.14
CTNNAL1-204ENST00000374595 TRIM41Q8WV44 630 aa28.38■■■□□ 2.13
CTNNAL1-204ENST00000374595 FAM9AQ8IZU1 332 aaPredicted RBP28.32■■■□□ 2.12
CTNNAL1-204ENST00000374595 PCGF6Q9BYE7 350 aa28.32■■■□□ 2.12
CTNNAL1-204ENST00000374595 EHMT2Q96KQ7 1210 aa28.24■■■□□ 2.11
CTNNAL1-204ENST00000374595 UNC13AQ9UPW8 1703 aa28.21■■■□□ 2.11
CTNNAL1-204ENST00000374595 PABPN1Q86U42 306 aaKnown RBP eCLIP28.2■■■□□ 2.11
CTNNAL1-204ENST00000374595 BAZ1AQ9NRL2 1556 aaPredicted RBP28.13■■■□□ 2.09
CTNNAL1-204ENST00000374595 SMARCA4P51532 1647 aa27.97■■■□□ 2.07
CTNNAL1-204ENST00000374595 HRCP23327 699 aa27.93■■■□□ 2.06
CTNNAL1-204ENST00000374595 BICRAQ9NZM4 1560 aa27.87■■■□□ 2.05
CTNNAL1-204ENST00000374595 TOP2AP11388 1531 aaKnown RBP27.83■■■□□ 2.04
CTNNAL1-204ENST00000374595 CCDC88BA6NC98 1476 aa27.8■■■□□ 2.04
CTNNAL1-204ENST00000374595 EIF4G1Q04637 1599 aaKnown RBP27.74■■■□□ 2.03
CTNNAL1-204ENST00000374595 ABCC8Q09428 1581 aa27.72■■■□□ 2.03
CTNNAL1-204ENST00000374595 SMARCA2P51531 1590 aa27.71■■■□□ 2.03
CTNNAL1-204ENST00000374595 TRIM26Q12899 539 aaPredicted RBP27.67■■■□□ 2.02
CTNNAL1-204ENST00000374595 PPARGC1BQ86YN6 1023 aaKnown RBP27.65■■■□□ 2.02
CTNNAL1-204ENST00000374595 SOGA1O94964 1423 aa27.4■■□□□ 1.98
CTNNAL1-204ENST00000374595 ATAD2BQ9ULI0 1458 aa27.36■■□□□ 1.97
CTNNAL1-204ENST00000374595 PEG3Q9GZU2 1588 aa27.33■■□□□ 1.97
CTNNAL1-204ENST00000374595 RUSC2Q8N2Y8 1516 aa27.31■■□□□ 1.96
CTNNAL1-204ENST00000374595 BAZ1BQ9UIG0 1483 aaKnown RBP27.28■■□□□ 1.96
CTNNAL1-204ENST00000374595 TTBK1Q5TCY1 1321 aaPredicted RBP27.21■■□□□ 1.95
CTNNAL1-204ENST00000374595 WRNQ14191 1432 aaPredicted RBP eCLIP27.19■■□□□ 1.94
CTNNAL1-204ENST00000374595 CSRNP3Q8WYN3 585 aa27.15■■□□□ 1.94
CTNNAL1-204ENST00000374595 UBTFP17480 764 aaKnown RBP27.13■■□□□ 1.93
CTNNAL1-204ENST00000374595 SYNJ1O43426 1573 aa27.09■■□□□ 1.93
CTNNAL1-204ENST00000374595 CEP162Q5TB80 1403 aa27.05■■□□□ 1.92
CTNNAL1-204ENST00000374595 TNIKQ9UKE5 1360 aa26.95■■□□□ 1.9
CTNNAL1-204ENST00000374595 EEA1Q15075 1411 aa26.94■■□□□ 1.9
CTNNAL1-204ENST00000374595 RANGAP1P46060 587 aaPredicted RBP26.88■■□□□ 1.89
CTNNAL1-204ENST00000374595 GOLGA3Q08378 1498 aa26.86■■□□□ 1.89
CTNNAL1-204ENST00000374595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.83■■□□□ 1.89
CTNNAL1-204ENST00000374595 NCAPD3P42695 1498 aa26.81■■□□□ 1.88
CTNNAL1-204ENST00000374595 ZEB1P37275 1124 aaPredicted RBP26.78■■□□□ 1.88
CTNNAL1-204ENST00000374595 HMGXB3Q12766 1538 aa26.74■■□□□ 1.87
CTNNAL1-204ENST00000374595 CEP164Q9UPV0 1460 aa26.73■■□□□ 1.87
CTNNAL1-204ENST00000374595 RAPGEF2Q9Y4G8 1499 aa26.7■■□□□ 1.87
CTNNAL1-204ENST00000374595 TOP2BQ02880 1626 aa26.69■■□□□ 1.86
CTNNAL1-204ENST00000374595 CCER1Q8TC90 406 aaPredicted RBP26.65■■□□□ 1.86
CTNNAL1-204ENST00000374595 KIF21BO75037 1637 aa26.64■■□□□ 1.85
CTNNAL1-204ENST00000374595 CLIP1P30622 1438 aa26.61■■□□□ 1.85
CTNNAL1-204ENST00000374595 CUX1P39880 1505 aa26.58■■□□□ 1.85
CTNNAL1-204ENST00000374595 BIVM-ERCC5R4GMW8 1640 aa26.56■■□□□ 1.84
CTNNAL1-204ENST00000374595 CFTRP13569 1480 aa26.55■■□□□ 1.84
CTNNAL1-204ENST00000374595 CC2D2AQ9P2K1 1620 aa26.41■■□□□ 1.82
CTNNAL1-204ENST00000374595 HNRNPUL2Q1KMD3 747 aaKnown RBP26.4■■□□□ 1.82
CTNNAL1-204ENST00000374595 VPS8Q8N3P4 1428 aa26.4■■□□□ 1.82
CTNNAL1-204ENST00000374595 PRXQ9BXM0 1461 aa26.37■■□□□ 1.81
CTNNAL1-204ENST00000374595 APLP2Q06481 763 aa26.36■■□□□ 1.81
CTNNAL1-204ENST00000374595 CADPSQ9ULU8 1353 aa26.35■■□□□ 1.81
CTNNAL1-204ENST00000374595 KIF27Q86VH2 1401 aa26.34■■□□□ 1.81
CTNNAL1-204ENST00000374595 ERICH3Q5RHP9 1530 aa26.25■■□□□ 1.79
CTNNAL1-204ENST00000374595 CUX2O14529 1486 aa26.24■■□□□ 1.79
CTNNAL1-204ENST00000374595 PRDM2Q13029 1718 aa26.2■■□□□ 1.79
CTNNAL1-204ENST00000374595 ARAP1Q96P48 1450 aa26.2■■□□□ 1.79
CTNNAL1-204ENST00000374595 FGD5Q6ZNL6 1462 aa26.17■■□□□ 1.78
CTNNAL1-204ENST00000374595 KANK4Q5T7N3 995 aaPredicted RBP26.17■■□□□ 1.78
CTNNAL1-204ENST00000374595 NESP48681 1621 aa26.16■■□□□ 1.78
CTNNAL1-204ENST00000374595 IGF1RP08069 1367 aa26.14■■□□□ 1.78
CTNNAL1-204ENST00000374595 DNAJC5BQ9UF47 199 aa26.12■■□□□ 1.77
CTNNAL1-204ENST00000374595 FANCD2Q9BXW9 1451 aa26.12■■□□□ 1.77
CTNNAL1-204ENST00000374595 ARHGAP35Q9NRY4 1499 aa26.04■■□□□ 1.76
CTNNAL1-204ENST00000374595 RAD54L2Q9Y4B4 1467 aa26.03■■□□□ 1.76
CTNNAL1-204ENST00000374595 CARMIL1Q5VZK9 1371 aa26.03■■□□□ 1.76
CTNNAL1-204ENST00000374595 P3H3Q8IVL6 736 aa25.98■■□□□ 1.75
CTNNAL1-204ENST00000374595 DIEXFQ68CQ4 756 aaKnown RBP25.91■■□□□ 1.74
CTNNAL1-204ENST00000374595 TOPBP1Q92547 1522 aa25.9■■□□□ 1.74
CTNNAL1-204ENST00000374595 POLA1P09884 1462 aaPredicted RBP25.9■■□□□ 1.74
CTNNAL1-204ENST00000374595 ITGAEP38570 1179 aa25.89■■□□□ 1.73
CTNNAL1-204ENST00000374595 DNMBPQ6XZF7 1577 aa25.86■■□□□ 1.73
CTNNAL1-204ENST00000374595 ATP1B4Q9UN42 357 aaPredicted RBP25.85■■□□□ 1.73
CTNNAL1-204ENST00000374595 URB2Q14146 1524 aaKnown RBP25.77■■□□□ 1.72
CTNNAL1-204ENST00000374595 ABCA10Q8WWZ4 1543 aa25.77■■□□□ 1.72
CTNNAL1-204ENST00000374595 TDRD9Q8NDG6 1382 aaKnown RBP25.76■■□□□ 1.71
CTNNAL1-204ENST00000374595 ZNF316A6NFI3 1004 aaPredicted RBP25.75■■□□□ 1.71
CTNNAL1-204ENST00000374595 FHOD3Q2V2M9 1422 aa25.71■■□□□ 1.71
CTNNAL1-204ENST00000374595 RRBP1Q9P2E9 1410 aaKnown RBP25.7■■□□□ 1.7
CTNNAL1-204ENST00000374595 CCNB3Q8WWL7 1395 aa25.7■■□□□ 1.7
CTNNAL1-204ENST00000374595 LAMC3Q9Y6N6 1575 aa25.69■■□□□ 1.7
CTNNAL1-204ENST00000374595 DHX57Q6P158 1386 aaKnown RBP25.66■■□□□ 1.7
CTNNAL1-204ENST00000374595 TIAM1Q13009 1591 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms