RNA–Protein interactions for RNA: ENST00000373821.6

SRPK1-203, Transcript of SRSF protein kinase 1, humanhuman

TSL 5

Gene SRPK1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-203ENST00000373821 AEBP2Q6ZN18 517 aaPredicted RBP19.76■□□□□ 0.75
SRPK1-203ENST00000373821 CHIC1Q5VXU3 224 aa18.88■□□□□ 0.61
SRPK1-203ENST00000373821 SENP3Q9H4L4 574 aaPredicted RBP17.04■□□□□ 0.32
SRPK1-203ENST00000373821 PHF23Q9BUL5 403 aaPredicted RBP16.74■□□□□ 0.27
SRPK1-203ENST00000373821 FOXD1Q16676 465 aa15.76■□□□□ 0.11
SRPK1-203ENST00000373821 PLPPR3Q6T4P5 718 aa15.17■□□□□ 0.02
SRPK1-203ENST00000373821 MSH5O43196 834 aa14.89□□□□□ -0.03
SRPK1-203ENST00000373821 PIAS4Q8N2W9 510 aaPredicted RBP14.82□□□□□ -0.04
SRPK1-203ENST00000373821 ADRA2BP18089 450 aa14.69□□□□□ -0.06
SRPK1-203ENST00000373821 PPP6R1Q9UPN7 881 aa14.68□□□□□ -0.06
SRPK1-203ENST00000373821 POTEDQ86YR6 584 aa14.39□□□□□ -0.11
SRPK1-203ENST00000373821 SCAF1Q9H7N4 1312 aaKnown RBP13.64□□□□□ -0.23
SRPK1-203ENST00000373821 DMRT2Q9Y5R5 561 aa13.46□□□□□ -0.25
SRPK1-203ENST00000373821 MAPK8IP2Q13387 824 aaPredicted RBP13.45□□□□□ -0.26
SRPK1-203ENST00000373821 PPP4R3CPQ6ZMV5 832 aa13.24□□□□□ -0.29
SRPK1-203ENST00000373821 CNKSR2Q8WXI2 1034 aa13.04□□□□□ -0.32
SRPK1-203ENST00000373821 DCAF8L1A6NGE4 600 aa12.99□□□□□ -0.33
SRPK1-203ENST00000373821 HOXD11P31277 338 aaPredicted RBP12.96□□□□□ -0.33
SRPK1-203ENST00000373821 RNF216Q9NWF9 866 aaPredicted RBP12.91□□□□□ -0.34
SRPK1-203ENST00000373821 NCBP3Q53F19 620 aaKnown RBP12.87□□□□□ -0.35
SRPK1-203ENST00000373821 CACNB1Q02641 598 aaPredicted RBP12.76□□□□□ -0.37
SRPK1-203ENST00000373821 RNF39Q9H2S5 420 aa12.62□□□□□ -0.39
SRPK1-203ENST00000373821 DNAJC5BQ9UF47 199 aa12.57□□□□□ -0.4
SRPK1-203ENST00000373821 NPM3O75607 178 aaKnown RBP12.52□□□□□ -0.41
SRPK1-203ENST00000373821 C1QBPQ07021 282 aaKnown RBP12.51□□□□□ -0.41
SRPK1-203ENST00000373821 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.44□□□□□ -0.424e-9■■■□□ 15
SRPK1-203ENST00000373821 KCNA4P22459 653 aa12.27□□□□□ -0.45
SRPK1-203ENST00000373821 U3KPZ7 1027 aaPredicted RBP12.07□□□□□ -0.48
SRPK1-203ENST00000373821 CAPN15O75808 1086 aa11.97□□□□□ -0.49
SRPK1-203ENST00000373821 APLP2Q06481 763 aa11.97□□□□□ -0.49
SRPK1-203ENST00000373821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.92□□□□□ -0.5
SRPK1-203ENST00000373821 HNRNPUL2Q1KMD3 747 aaKnown RBP11.92□□□□□ -0.5
SRPK1-203ENST00000373821 SLC4A2P04920 1241 aa11.9□□□□□ -0.5
SRPK1-203ENST00000373821 SPINK5Q9NQ38 1064 aaPredicted RBP11.87□□□□□ -0.51
SRPK1-203ENST00000373821 DSG3P32926 999 aa11.8□□□□□ -0.52
SRPK1-203ENST00000373821 SAMD1Q6SPF0 538 aaPredicted RBP11.8□□□□□ -0.52
SRPK1-203ENST00000373821 ZNF219Q9P2Y4 722 aaPredicted RBP11.79□□□□□ -0.52
SRPK1-203ENST00000373821 TRHP20396 242 aaPredicted RBP11.76□□□□□ -0.53
SRPK1-203ENST00000373821 SLC4A1APQ9BWU0 796 aaKnown RBP11.68□□□□□ -0.54
SRPK1-203ENST00000373821 MYCNP04198 464 aaPredicted RBP11.67□□□□□ -0.54
SRPK1-203ENST00000373821 ABCB7O75027 752 aa11.63□□□□□ -0.55
SRPK1-203ENST00000373821 FOXD4L1Q9NU39 408 aa11.53□□□□□ -0.56
SRPK1-203ENST00000373821 POLA2Q14181 598 aa11.42□□□□□ -0.58
SRPK1-203ENST00000373821 RBM42Q9BTD8 480 aaKnown RBP11.41□□□□□ -0.58
SRPK1-203ENST00000373821 POTEHQ6S545 545 aa11.32□□□□□ -0.6
SRPK1-203ENST00000373821 ZBTB12Q9Y330 459 aaPredicted RBP11.32□□□□□ -0.6
SRPK1-203ENST00000373821 ATF5Q9Y2D1 282 aaPredicted RBP11.24□□□□□ -0.61
SRPK1-203ENST00000373821 ZBTB22O15209 634 aa11.21□□□□□ -0.61
SRPK1-203ENST00000373821 ATXN8OSP0DMR3 200 aa11.21□□□□□ -0.61
SRPK1-203ENST00000373821 AKT1S1Q96B36 256 aa11.09□□□□□ -0.63
SRPK1-203ENST00000373821 CHRDL2Q6WN34 429 aa11.07□□□□□ -0.64
SRPK1-203ENST00000373821 OSCARQ8IYS5 282 aa11.04□□□□□ -0.64
SRPK1-203ENST00000373821 FBLN2P98095 1184 aa11.03□□□□□ -0.64
SRPK1-203ENST00000373821 REM2Q8IYK8 340 aaPredicted RBP10.93□□□□□ -0.66
SRPK1-203ENST00000373821 SPDYE2BA6NHP3 402 aa10.9□□□□□ -0.66
SRPK1-203ENST00000373821 SPDYE6P0CI01 402 aa10.9□□□□□ -0.66
SRPK1-203ENST00000373821 SPDYE2Q495Y8 402 aa10.9□□□□□ -0.66
SRPK1-203ENST00000373821 PITPNM1O00562 1244 aa10.81□□□□□ -0.68
SRPK1-203ENST00000373821 PIP4P2Q8N4L2 257 aa10.77□□□□□ -0.69
SRPK1-203ENST00000373821 ZNF692Q9BU19 519 aaPredicted RBP10.77□□□□□ -0.69
SRPK1-203ENST00000373821 CSRNP3Q8WYN3 585 aa10.75□□□□□ -0.69
SRPK1-203ENST00000373821 MKRN4PQ13434 485 aaPredicted RBP10.74□□□□□ -0.69
SRPK1-203ENST00000373821 SPDYE1Q8NFV5 336 aaPredicted RBP10.73□□□□□ -0.69
SRPK1-203ENST00000373821 FXR2P51116 673 aaKnown RBP eCLIP10.71□□□□□ -0.69
SRPK1-203ENST00000373821 EHMT2Q96KQ7 1210 aa10.7□□□□□ -0.7
SRPK1-203ENST00000373821 CLEC11AQ9Y240 323 aa10.69□□□□□ -0.7
SRPK1-203ENST00000373821 SSUH2Q9Y2M2 353 aa10.68□□□□□ -0.7
SRPK1-203ENST00000373821 HAX1O00165 279 aa10.65□□□□□ -0.7
SRPK1-203ENST00000373821 SP7Q8TDD2 431 aaPredicted RBP10.64□□□□□ -0.71
SRPK1-203ENST00000373821 PRKAR2AP13861 404 aaKnown RBP10.57□□□□□ -0.72
SRPK1-203ENST00000373821 PABPN1Q86U42 306 aaKnown RBP eCLIP10.57□□□□□ -0.72
SRPK1-203ENST00000373821 PRR29P0C7W0 189 aa10.53□□□□□ -0.72
SRPK1-203ENST00000373821 CHADLQ6NUI6 762 aa10.39□□□□□ -0.75
SRPK1-203ENST00000373821 STAG3Q9UJ98 1225 aa10.39□□□□□ -0.75
SRPK1-203ENST00000373821 C19orf67A6NJJ6 358 aa10.37□□□□□ -0.75
SRPK1-203ENST00000373821 SPDYE4A6NLX3 237 aa10.36□□□□□ -0.75
SRPK1-203ENST00000373821 EVX2Q03828 476 aa10.33□□□□□ -0.76
SRPK1-203ENST00000373821 FARP1Q9Y4F1 1045 aaPredicted RBP10.29□□□□□ -0.76
SRPK1-203ENST00000373821 CD44P16070 742 aaKnown RBP10.25□□□□□ -0.77
SRPK1-203ENST00000373821 GABBR2O75899 941 aa10.21□□□□□ -0.77
SRPK1-203ENST00000373821 CLCN6P51797 869 aa10.21□□□□□ -0.77
SRPK1-203ENST00000373821 CREBZFQ9NS37 354 aa10.16□□□□□ -0.78
SRPK1-203ENST00000373821 PAK3O75914 559 aaPredicted RBP10.15□□□□□ -0.78
SRPK1-203ENST00000373821 NPM1P06748 294 aaKnown RBP eCLIP10.14□□□□□ -0.79
SRPK1-203ENST00000373821 ZRANB1Q9UGI0 708 aa10.1□□□□□ -0.79
SRPK1-203ENST00000373821 ZNF579Q8NAF0 562 aaKnown RBP10.07□□□□□ -0.8
SRPK1-203ENST00000373821 PLEKHG5O94827 1062 aa10.05□□□□□ -0.8
SRPK1-203ENST00000373821 DCBLD2Q96PD2 775 aa10.05□□□□□ -0.8
SRPK1-203ENST00000373821 PROM2Q8N271 834 aa10.02□□□□□ -0.81
SRPK1-203ENST00000373821 LHX8Q68G74 356 aa9.98□□□□□ -0.81
SRPK1-203ENST00000373821 MNX1P50219 401 aaPredicted RBP9.94□□□□□ -0.82
SRPK1-203ENST00000373821 MIER1Q8N108 512 aa9.93□□□□□ -0.82
SRPK1-203ENST00000373821 POTEIP0CG38 1075 aa9.9□□□□□ -0.82
SRPK1-203ENST00000373821 PHF12Q96QT6 1004 aa9.9□□□□□ -0.82
SRPK1-203ENST00000373821 GALR2O43603 387 aaPredicted RBP9.89□□□□□ -0.83
SRPK1-203ENST00000373821 PLCD3Q8N3E9 789 aa9.88□□□□□ -0.83
SRPK1-203ENST00000373821 ZBTB47Q9UFB7 747 aaPredicted RBP9.87□□□□□ -0.83
SRPK1-203ENST00000373821 TSPYL2Q9H2G4 693 aaPredicted RBP9.86□□□□□ -0.83
SRPK1-203ENST00000373821 FKBP8Q14318 412 aa9.84□□□□□ -0.83
SRPK1-203ENST00000373821 MS4A3Q96HJ5 214 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms