RNA–Protein interactions for RNA: ENST00000373564.7

LCK-206, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 5 BASIC

Gene LCK, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-206ENST00000373564 NISCHQ9Y2I1 1504 aa33.53■■■□□ 2.96
LCK-206ENST00000373564 CCDC180Q9P1Z9 1646 aa28.66■■■□□ 2.18
LCK-206ENST00000373564 SHROOM4Q9ULL8 1493 aa28.33■■■□□ 2.13
LCK-206ENST00000373564 ZCCHC6Q5VYS8 1495 aaKnown RBP28.31■■■□□ 2.12
LCK-206ENST00000373564 DCAF8L2P0C7V8 631 aa27.8■■■□□ 2.04
LCK-206ENST00000373564 SUPT5HO00267 1087 aaKnown RBP27.69■■■□□ 2.02
LCK-206ENST00000373564 DCAF1Q9Y4B6 1507 aa27.55■■■□□ 2
LCK-206ENST00000373564 CHIC1Q5VXU3 224 aa26.86■■□□□ 1.89
LCK-206ENST00000373564 MYO15BQ96JP2 1530 aa26.84■■□□□ 1.89
LCK-206ENST00000373564 ABCC9O60706 1549 aa26.78■■□□□ 1.88
LCK-206ENST00000373564 SCRIBQ14160 1630 aa26.75■■□□□ 1.87
LCK-206ENST00000373564 NACADO15069 1562 aa26.53■■□□□ 1.84
LCK-206ENST00000373564 RSF1Q96T23 1441 aaPredicted RBP26.43■■□□□ 1.82
LCK-206ENST00000373564 CECR2Q9BXF3 1484 aa26.14■■□□□ 1.78
LCK-206ENST00000373564 RB1CC1Q8TDY2 1594 aa26.14■■□□□ 1.77
LCK-206ENST00000373564 MROH2BQ7Z745 1585 aa26.03■■□□□ 1.76
LCK-206ENST00000373564 LOC105371045A0A1W2PR82 267 aa26.02■■□□□ 1.76
LCK-206ENST00000373564 WIZO95785 1651 aa25.9■■□□□ 1.74
LCK-206ENST00000373564 TRIM41Q8WV44 630 aa25.85■■□□□ 1.73
LCK-206ENST00000373564 BAZ1AQ9NRL2 1556 aaPredicted RBP25.77■■□□□ 1.72
LCK-206ENST00000373564 UNC13AQ9UPW8 1703 aa25.76■■□□□ 1.71
LCK-206ENST00000373564 PCGF6Q9BYE7 350 aa25.75■■□□□ 1.71
LCK-206ENST00000373564 HRCP23327 699 aa25.61■■□□□ 1.69
LCK-206ENST00000373564 FAM9AQ8IZU1 332 aaPredicted RBP25.59■■□□□ 1.69
LCK-206ENST00000373564 SMARCA4P51532 1647 aa25.59■■□□□ 1.69
LCK-206ENST00000373564 TOP2AP11388 1531 aaKnown RBP25.5■■□□□ 1.67
LCK-206ENST00000373564 EIF4G1Q04637 1599 aaKnown RBP25.45■■□□□ 1.66
LCK-206ENST00000373564 PABPN1Q86U42 306 aaKnown RBP eCLIP25.44■■□□□ 1.66
LCK-206ENST00000373564 BICRAQ9NZM4 1560 aa25.43■■□□□ 1.66
LCK-206ENST00000373564 CCDC88BA6NC98 1476 aa25.38■■□□□ 1.65
LCK-206ENST00000373564 TRIM26Q12899 539 aaPredicted RBP25.36■■□□□ 1.65
LCK-206ENST00000373564 SMARCA2P51531 1590 aa25.35■■□□□ 1.65
LCK-206ENST00000373564 EHMT2Q96KQ7 1210 aa25.34■■□□□ 1.65
LCK-206ENST00000373564 ABCC8Q09428 1581 aa25.21■■□□□ 1.63
LCK-206ENST00000373564 PEG3Q9GZU2 1588 aa25.12■■□□□ 1.61
LCK-206ENST00000373564 PPARGC1BQ86YN6 1023 aaKnown RBP25.08■■□□□ 1.61
LCK-206ENST00000373564 ATAD2BQ9ULI0 1458 aa24.97■■□□□ 1.59
LCK-206ENST00000373564 SOGA1O94964 1423 aa24.93■■□□□ 1.58
LCK-206ENST00000373564 BAZ1BQ9UIG0 1483 aaKnown RBP24.89■■□□□ 1.57
LCK-206ENST00000373564 WRNQ14191 1432 aaPredicted RBP eCLIP24.83■■□□□ 1.57
LCK-206ENST00000373564 RUSC2Q8N2Y8 1516 aa24.82■■□□□ 1.56
LCK-206ENST00000373564 EEA1Q15075 1411 aa24.81■■□□□ 1.56
LCK-206ENST00000373564 CSRNP3Q8WYN3 585 aa24.8■■□□□ 1.56
LCK-206ENST00000373564 ZEB1P37275 1124 aaPredicted RBP24.72■■□□□ 1.55
LCK-206ENST00000373564 SYNJ1O43426 1573 aa24.72■■□□□ 1.55
LCK-206ENST00000373564 TNIKQ9UKE5 1360 aa24.71■■□□□ 1.55
LCK-206ENST00000373564 CEP162Q5TB80 1403 aa24.71■■□□□ 1.55
LCK-206ENST00000373564 UBTFP17480 764 aaKnown RBP24.65■■□□□ 1.54
LCK-206ENST00000373564 GOLGA3Q08378 1498 aa24.6■■□□□ 1.53
LCK-206ENST00000373564 NCAPD3P42695 1498 aa24.55■■□□□ 1.52
LCK-206ENST00000373564 HMGXB3Q12766 1538 aa24.52■■□□□ 1.52
LCK-206ENST00000373564 CEP164Q9UPV0 1460 aa24.5■■□□□ 1.51
LCK-206ENST00000373564 KIF21BO75037 1637 aa24.48■■□□□ 1.51
LCK-206ENST00000373564 TTBK1Q5TCY1 1321 aaPredicted RBP24.46■■□□□ 1.51
LCK-206ENST00000373564 TOP2BQ02880 1626 aa24.46■■□□□ 1.51
LCK-206ENST00000373564 BIVM-ERCC5R4GMW8 1640 aa24.39■■□□□ 1.49
LCK-206ENST00000373564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.37■■□□□ 1.49
LCK-206ENST00000373564 RAPGEF2Q9Y4G8 1499 aa24.33■■□□□ 1.49
LCK-206ENST00000373564 CLIP1P30622 1438 aa24.3■■□□□ 1.48
LCK-206ENST00000373564 CCER1Q8TC90 406 aaPredicted RBP24.29■■□□□ 1.48
LCK-206ENST00000373564 CFTRP13569 1480 aa24.27■■□□□ 1.48
LCK-206ENST00000373564 CUX1P39880 1505 aa24.25■■□□□ 1.47
LCK-206ENST00000373564 CC2D2AQ9P2K1 1620 aa24.19■■□□□ 1.46
LCK-206ENST00000373564 RANGAP1P46060 587 aaPredicted RBP24.18■■□□□ 1.46
LCK-206ENST00000373564 VPS8Q8N3P4 1428 aa24.17■■□□□ 1.46
LCK-206ENST00000373564 PRXQ9BXM0 1461 aa24.14■■□□□ 1.46
LCK-206ENST00000373564 ERICH3Q5RHP9 1530 aa24.13■■□□□ 1.45
LCK-206ENST00000373564 PRDM2Q13029 1718 aa24.11■■□□□ 1.45
LCK-206ENST00000373564 KIF27Q86VH2 1401 aa24.09■■□□□ 1.45
LCK-206ENST00000373564 APLP2Q06481 763 aa24.07■■□□□ 1.44
LCK-206ENST00000373564 CADPSQ9ULU8 1353 aa24.05■■□□□ 1.44
LCK-206ENST00000373564 ARAP1Q96P48 1450 aa23.95■■□□□ 1.42
LCK-206ENST00000373564 HNRNPUL2Q1KMD3 747 aaKnown RBP23.95■■□□□ 1.42
LCK-206ENST00000373564 CUX2O14529 1486 aa23.9■■□□□ 1.42
LCK-206ENST00000373564 DNAJC5BQ9UF47 199 aa23.9■■□□□ 1.42
LCK-206ENST00000373564 FGD5Q6ZNL6 1462 aa23.86■■□□□ 1.41
LCK-206ENST00000373564 IGF1RP08069 1367 aa23.86■■□□□ 1.41
LCK-206ENST00000373564 FANCD2Q9BXW9 1451 aa23.81■■□□□ 1.4
LCK-206ENST00000373564 ARHGAP35Q9NRY4 1499 aa23.79■■□□□ 1.4
LCK-206ENST00000373564 KANK4Q5T7N3 995 aaPredicted RBP23.78■■□□□ 1.4
LCK-206ENST00000373564 CARMIL1Q5VZK9 1371 aa23.75■■□□□ 1.39
LCK-206ENST00000373564 NESP48681 1621 aa23.69■■□□□ 1.38
LCK-206ENST00000373564 DIEXFQ68CQ4 756 aaKnown RBP23.68■■□□□ 1.38
LCK-206ENST00000373564 DNMBPQ6XZF7 1577 aa23.67■■□□□ 1.38
LCK-206ENST00000373564 RAD54L2Q9Y4B4 1467 aa23.64■■□□□ 1.37
LCK-206ENST00000373564 TOPBP1Q92547 1522 aa23.63■■□□□ 1.37
LCK-206ENST00000373564 ZNF316A6NFI3 1004 aaPredicted RBP23.6■■□□□ 1.37
LCK-206ENST00000373564 POLA1P09884 1462 aaPredicted RBP23.6■■□□□ 1.37
LCK-206ENST00000373564 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
LCK-206ENST00000373564 RRBP1Q9P2E9 1410 aaKnown RBP23.58■■□□□ 1.37
LCK-206ENST00000373564 LAMC3Q9Y6N6 1575 aa23.53■■□□□ 1.36
LCK-206ENST00000373564 CCNB3Q8WWL7 1395 aa23.5■■□□□ 1.35
LCK-206ENST00000373564 TIAM1Q13009 1591 aa23.49■■□□□ 1.35
LCK-206ENST00000373564 MAP3K1Q13233 1512 aa23.48■■□□□ 1.35
LCK-206ENST00000373564 URB2Q14146 1524 aaKnown RBP23.48■■□□□ 1.35
LCK-206ENST00000373564 DHX57Q6P158 1386 aaKnown RBP23.47■■□□□ 1.35
LCK-206ENST00000373564 P3H3Q8IVL6 736 aa23.47■■□□□ 1.35
LCK-206ENST00000373564 CUL7Q14999 1698 aa23.44■■□□□ 1.34
LCK-206ENST00000373564 FHAD1B1AJZ9 1412 aa23.43■■□□□ 1.34
LCK-206ENST00000373564 CLSPNQ9HAW4 1339 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms