RNA–Protein interactions for RNA: ENST00000373479.8

RNF8-202, Transcript of ring finger protein 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF8, Length 5,631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-202ENST00000373479 DCAF8L2P0C7V8 631 aa24.82■■□□□ 1.56
RNF8-202ENST00000373479 NISCHQ9Y2I1 1504 aa24.28■■□□□ 1.48
RNF8-202ENST00000373479 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
RNF8-202ENST00000373479 SHROOM4Q9ULL8 1493 aa23.19■■□□□ 1.3
RNF8-202ENST00000373479 PELP1Q8IZL8 1130 aaKnown RBP23.11■■□□□ 1.29
RNF8-202ENST00000373479 EHMT2Q96KQ7 1210 aa23.1■■□□□ 1.29
RNF8-202ENST00000373479 APLP2Q06481 763 aa22.72■■□□□ 1.23
RNF8-202ENST00000373479 PCGF6Q9BYE7 350 aa22.58■■□□□ 1.21
RNF8-202ENST00000373479 FAM9AQ8IZU1 332 aaPredicted RBP22.52■■□□□ 1.2
RNF8-202ENST00000373479 TTBK1Q5TCY1 1321 aaPredicted RBP22.38■■□□□ 1.17
RNF8-202ENST00000373479 CENPBP07199 599 aaPredicted RBP22.32■■□□□ 1.16
RNF8-202ENST00000373479 ZEB1P37275 1124 aaPredicted RBP22.23■■□□□ 1.15
RNF8-202ENST00000373479 ERICH6Q7L0X2 663 aa22.14■■□□□ 1.13
RNF8-202ENST00000373479 CCER1Q8TC90 406 aaPredicted RBP22.13■■□□□ 1.13
RNF8-202ENST00000373479 TRIM41Q8WV44 630 aa22.03■■□□□ 1.12
RNF8-202ENST00000373479 RANGAP1P46060 587 aaPredicted RBP22■■□□□ 1.11
RNF8-202ENST00000373479 NEFLP07196 543 aa21.8■■□□□ 1.08
RNF8-202ENST00000373479 UBTFP17480 764 aaKnown RBP21.8■■□□□ 1.08
RNF8-202ENST00000373479 ATP1B4Q9UN42 357 aaPredicted RBP21.8■■□□□ 1.08
RNF8-202ENST00000373479 YTHDC1Q96MU7 727 aaKnown RBP21.77■■□□□ 1.08
RNF8-202ENST00000373479 MYT1Q01538 1121 aa21.74■■□□□ 1.07
RNF8-202ENST00000373479 PPARGC1BQ86YN6 1023 aaKnown RBP21.55■■□□□ 1.04
RNF8-202ENST00000373479 TRIM26Q12899 539 aaPredicted RBP21.52■■□□□ 1.04
RNF8-202ENST00000373479 HRCP23327 699 aa21.45■■□□□ 1.02
RNF8-202ENST00000373479 LOC105371045A0A1W2PR82 267 aa21.18■□□□□ 0.98
RNF8-202ENST00000373479 ITGAEP38570 1179 aa21.18■□□□□ 0.98
RNF8-202ENST00000373479 DAXXQ9UER7 740 aaPredicted RBP21.15■□□□□ 0.98
RNF8-202ENST00000373479 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
RNF8-202ENST00000373479 MYT1LQ9UL68 1186 aa21.11■□□□□ 0.97
RNF8-202ENST00000373479 HNRNPUL2Q1KMD3 747 aaKnown RBP21.1■□□□□ 0.97
RNF8-202ENST00000373479 POLR3GLQ9BT43 218 aa21.09■□□□□ 0.97
RNF8-202ENST00000373479 ABCC9O60706 1549 aa21.04■□□□□ 0.96
RNF8-202ENST00000373479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.95■□□□□ 0.94
RNF8-202ENST00000373479 CNGB1Q14028 1251 aaPredicted RBP20.93■□□□□ 0.94
RNF8-202ENST00000373479 DIEXFQ68CQ4 756 aaKnown RBP20.9■□□□□ 0.94
RNF8-202ENST00000373479 RTL5Q5HYW3 569 aaPredicted RBP20.76■□□□□ 0.91
RNF8-202ENST00000373479 PABPN1Q86U42 306 aaKnown RBP eCLIP20.71■□□□□ 0.91
RNF8-202ENST00000373479 CLSPNQ9HAW4 1339 aa20.66■□□□□ 0.9
RNF8-202ENST00000373479 ZNF316A6NFI3 1004 aaPredicted RBP20.64■□□□□ 0.9
RNF8-202ENST00000373479 SLC4A1APQ9BWU0 796 aaKnown RBP20.59■□□□□ 0.89
RNF8-202ENST00000373479 GTF3C3Q9Y5Q9 886 aa20.58■□□□□ 0.89
RNF8-202ENST00000373479 FAM50AQ14320 339 aaKnown RBP20.56■□□□□ 0.88
RNF8-202ENST00000373479 BCANQ96GW7 911 aa20.52■□□□□ 0.88
RNF8-202ENST00000373479 NEUROD1Q13562 356 aa20.49■□□□□ 0.87
RNF8-202ENST00000373479 TRIM52Q96A61 297 aa20.47■□□□□ 0.87
RNF8-202ENST00000373479 ANP32CO43423 234 aa20.41■□□□□ 0.86
RNF8-202ENST00000373479 CDK11AQ9UQ88 783 aaPredicted RBP20.38■□□□□ 0.85
RNF8-202ENST00000373479 FBLN2P98095 1184 aa20.3■□□□□ 0.84
RNF8-202ENST00000373479 ZNF326Q5BKZ1 582 aaKnown RBP20.28■□□□□ 0.84
RNF8-202ENST00000373479 ACIN1Q9UKV3 1341 aaKnown RBP20.26■□□□□ 0.83
RNF8-202ENST00000373479 CCDC180Q9P1Z9 1646 aa20.25■□□□□ 0.83
RNF8-202ENST00000373479 ZBTB47Q9UFB7 747 aaPredicted RBP20.17■□□□□ 0.82
RNF8-202ENST00000373479 SCRIBQ14160 1630 aa20.11■□□□□ 0.81
RNF8-202ENST00000373479 CANXP27824 592 aaKnown RBP20.07■□□□□ 0.8
RNF8-202ENST00000373479 ZCCHC6Q5VYS8 1495 aaKnown RBP20.06■□□□□ 0.8
RNF8-202ENST00000373479 ANP32AP39687 249 aaKnown RBP20.06■□□□□ 0.8
RNF8-202ENST00000373479 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.79
RNF8-202ENST00000373479 CSRNP3Q8WYN3 585 aa20.01■□□□□ 0.79
RNF8-202ENST00000373479 BCL11AQ9H165 835 aa20■□□□□ 0.79
RNF8-202ENST00000373479 RB1CC1Q8TDY2 1594 aa19.98■□□□□ 0.79
RNF8-202ENST00000373479 P3H3Q8IVL6 736 aa19.94■□□□□ 0.78
RNF8-202ENST00000373479 NPM2Q86SE8 214 aaKnown RBP19.93■□□□□ 0.78
RNF8-202ENST00000373479 NEFMP07197 916 aa19.93■□□□□ 0.78
RNF8-202ENST00000373479 FKBP8Q14318 412 aa19.93■□□□□ 0.78
RNF8-202ENST00000373479 SLC24A1O60721 1099 aa19.88■□□□□ 0.77
RNF8-202ENST00000373479 ARID3CA6NKF2 412 aa19.86■□□□□ 0.77
RNF8-202ENST00000373479 HNRNPUQ00839 825 aaKnown RBP eCLIP19.83■□□□□ 0.76
RNF8-202ENST00000373479 NPM1P06748 294 aaKnown RBP eCLIP19.8■□□□□ 0.76
RNF8-202ENST00000373479 DDX10Q13206 875 aaKnown RBP19.79■□□□□ 0.76
RNF8-202ENST00000373479 EIF5BO60841 1220 aaKnown RBP19.79■□□□□ 0.76
RNF8-202ENST00000373479 ZNF777Q9ULD5 760 aaPredicted RBP19.78■□□□□ 0.76
RNF8-202ENST00000373479 TONSLQ96HA7 1378 aa19.78■□□□□ 0.76
RNF8-202ENST00000373479 NACADO15069 1562 aa19.77■□□□□ 0.76
RNF8-202ENST00000373479 ESF1Q9H501 851 aaKnown RBP19.75■□□□□ 0.75
RNF8-202ENST00000373479 FAM9BQ8IZU0 186 aa19.73■□□□□ 0.75
RNF8-202ENST00000373479 ANP32BQ92688 251 aaKnown RBP19.71■□□□□ 0.75
RNF8-202ENST00000373479 HSP90AA1P07900 732 aaKnown RBP19.7■□□□□ 0.74
RNF8-202ENST00000373479 UPF2Q9HAU5 1272 aaKnown RBP19.68■□□□□ 0.74
RNF8-202ENST00000373479 DCAF1Q9Y4B6 1507 aa19.66■□□□□ 0.74
RNF8-202ENST00000373479 CCDC136Q96JN2 1154 aa19.65■□□□□ 0.74
RNF8-202ENST00000373479 SALL2Q9Y467 1007 aaPredicted RBP19.64■□□□□ 0.73
RNF8-202ENST00000373479 TMC1Q8TDI8 760 aa19.6■□□□□ 0.73
RNF8-202ENST00000373479 NBR1Q14596 966 aa19.57■□□□□ 0.72
RNF8-202ENST00000373479 SCAF1Q9H7N4 1312 aaKnown RBP19.56■□□□□ 0.72
RNF8-202ENST00000373479 MIER1Q8N108 512 aa19.54■□□□□ 0.72
RNF8-202ENST00000373479 CHGAP10645 457 aaKnown RBP19.53■□□□□ 0.72
RNF8-202ENST00000373479 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.53■□□□□ 0.72
RNF8-202ENST00000373479 MRS2Q9HD23 443 aa19.53■□□□□ 0.72
RNF8-202ENST00000373479 CHMP7Q8WUX9 453 aaPredicted RBP19.52■□□□□ 0.72
RNF8-202ENST00000373479 CHIC2Q9UKJ5 165 aa19.49■□□□□ 0.71
RNF8-202ENST00000373479 GLIPR1L2Q4G1C9 344 aa19.47■□□□□ 0.71
RNF8-202ENST00000373479 IRX6P78412 446 aaPredicted RBP19.45■□□□□ 0.7
RNF8-202ENST00000373479 BAZ1BQ9UIG0 1483 aaKnown RBP19.43■□□□□ 0.7
RNF8-202ENST00000373479 WDR43Q15061 677 aaKnown RBP eCLIP19.43■□□□□ 0.7
RNF8-202ENST00000373479 STAG3Q9UJ98 1225 aa19.42■□□□□ 0.7
RNF8-202ENST00000373479 ARXQ96QS3 562 aa19.42■□□□□ 0.7
RNF8-202ENST00000373479 HIRIP3Q9BW71 556 aaPredicted RBP19.4■□□□□ 0.7
RNF8-202ENST00000373479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.37■□□□□ 0.695e-8■■■■□ 21.6
RNF8-202ENST00000373479 KDM2AQ9Y2K7 1162 aa19.37■□□□□ 0.69
RNF8-202ENST00000373479 EEA1Q15075 1411 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms