RNA–Protein interactions for RNA: ENST00000373201.5

PTPRT-207, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-207ENST00000373201 DCAF8L2P0C7V8 631 aa15.75■□□□□ 0.11
PTPRT-207ENST00000373201 EHMT2Q96KQ7 1210 aa14.69□□□□□ -0.06
PTPRT-207ENST00000373201 PELP1Q8IZL8 1130 aaKnown RBP14.65□□□□□ -0.07
PTPRT-207ENST00000373201 SUPT5HO00267 1087 aaKnown RBP14.47□□□□□ -0.09
PTPRT-207ENST00000373201 FAM9AQ8IZU1 332 aaPredicted RBP14.37□□□□□ -0.11
PTPRT-207ENST00000373201 APLP2Q06481 763 aa14.33□□□□□ -0.12
PTPRT-207ENST00000373201 ERICH6Q7L0X2 663 aa14.22□□□□□ -0.13
PTPRT-207ENST00000373201 TTBK1Q5TCY1 1321 aaPredicted RBP14.18□□□□□ -0.14
PTPRT-207ENST00000373201 SHROOM4Q9ULL8 1493 aa14.13□□□□□ -0.15
PTPRT-207ENST00000373201 RANGAP1P46060 587 aaPredicted RBP14.04□□□□□ -0.16
PTPRT-207ENST00000373201 ATP1B4Q9UN42 357 aaPredicted RBP14.03□□□□□ -0.16
PTPRT-207ENST00000373201 CCER1Q8TC90 406 aaPredicted RBP13.99□□□□□ -0.17
PTPRT-207ENST00000373201 MYT1Q01538 1121 aa13.79□□□□□ -0.2
PTPRT-207ENST00000373201 PCGF6Q9BYE7 350 aa13.78□□□□□ -0.2
PTPRT-207ENST00000373201 MYT1LQ9UL68 1186 aa13.78□□□□□ -0.2
PTPRT-207ENST00000373201 CHIC1Q5VXU3 224 aa13.71□□□□□ -0.22
PTPRT-207ENST00000373201 NEFLP07196 543 aa13.69□□□□□ -0.22
PTPRT-207ENST00000373201 DAXXQ9UER7 740 aaPredicted RBP13.64□□□□□ -0.23
PTPRT-207ENST00000373201 CENPBP07199 599 aaPredicted RBP13.62□□□□□ -0.23
PTPRT-207ENST00000373201 POLR3GLQ9BT43 218 aa13.58□□□□□ -0.24
PTPRT-207ENST00000373201 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
PTPRT-207ENST00000373201 YTHDC1Q96MU7 727 aaKnown RBP13.55□□□□□ -0.24
PTPRT-207ENST00000373201 UBTFP17480 764 aaKnown RBP13.49□□□□□ -0.25
PTPRT-207ENST00000373201 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.46□□□□□ -0.26
PTPRT-207ENST00000373201 HNRNPUL2Q1KMD3 747 aaKnown RBP13.46□□□□□ -0.26
PTPRT-207ENST00000373201 CNGB1Q14028 1251 aaPredicted RBP13.46□□□□□ -0.26
PTPRT-207ENST00000373201 TRIM41Q8WV44 630 aa13.29□□□□□ -0.28
PTPRT-207ENST00000373201 ITGAEP38570 1179 aa13.28□□□□□ -0.28
PTPRT-207ENST00000373201 ZNF316A6NFI3 1004 aaPredicted RBP13.27□□□□□ -0.29
PTPRT-207ENST00000373201 CLSPNQ9HAW4 1339 aa13.27□□□□□ -0.29
PTPRT-207ENST00000373201 ZEB1P37275 1124 aaPredicted RBP13.24□□□□□ -0.29
PTPRT-207ENST00000373201 SLC24A1O60721 1099 aa13.23□□□□□ -0.29
PTPRT-207ENST00000373201 PPARGC1BQ86YN6 1023 aaKnown RBP13.23□□□□□ -0.29
PTPRT-207ENST00000373201 NISCHQ9Y2I1 1504 aa13.22□□□□□ -0.29
PTPRT-207ENST00000373201 BCL11AQ9H165 835 aa13.16□□□□□ -0.3
PTPRT-207ENST00000373201 RTL5Q5HYW3 569 aaPredicted RBP13.06□□□□□ -0.32
PTPRT-207ENST00000373201 ZBTB47Q9UFB7 747 aaPredicted RBP13.06□□□□□ -0.32
PTPRT-207ENST00000373201 BCANQ96GW7 911 aa13.05□□□□□ -0.32
PTPRT-207ENST00000373201 PLPPR3Q6T4P5 718 aa12.9□□□□□ -0.34
PTPRT-207ENST00000373201 CANXP27824 592 aaKnown RBP12.86□□□□□ -0.35
PTPRT-207ENST00000373201 ZNF326Q5BKZ1 582 aaKnown RBP12.82□□□□□ -0.36
PTPRT-207ENST00000373201 TRIM52Q96A61 297 aa12.81□□□□□ -0.36
PTPRT-207ENST00000373201 NEFMP07197 916 aa12.8□□□□□ -0.36
PTPRT-207ENST00000373201 FAM50AQ14320 339 aaKnown RBP12.79□□□□□ -0.36
PTPRT-207ENST00000373201 A0A0G2JS52 829 aa12.74□□□□□ -0.37
PTPRT-207ENST00000373201 FBLN2P98095 1184 aa12.73□□□□□ -0.37
PTPRT-207ENST00000373201 NEUROD1Q13562 356 aa12.7□□□□□ -0.38
PTPRT-207ENST00000373201 ESF1Q9H501 851 aaKnown RBP12.7□□□□□ -0.38
PTPRT-207ENST00000373201 SCAF1Q9H7N4 1312 aaKnown RBP12.67□□□□□ -0.38
PTPRT-207ENST00000373201 TRIM26Q12899 539 aaPredicted RBP12.62□□□□□ -0.39
PTPRT-207ENST00000373201 HSP90AA1P07900 732 aaKnown RBP12.61□□□□□ -0.39
PTPRT-207ENST00000373201 STAG3Q9UJ98 1225 aa12.61□□□□□ -0.39
PTPRT-207ENST00000373201 CDK11BP21127 795 aaKnown RBP12.6□□□□□ -0.39
PTPRT-207ENST00000373201 CDK11AQ9UQ88 783 aaPredicted RBP12.6□□□□□ -0.39
PTPRT-207ENST00000373201 ANP32BQ92688 251 aaKnown RBP12.57□□□□□ -0.4
PTPRT-207ENST00000373201 HRCP23327 699 aa12.56□□□□□ -0.4
PTPRT-207ENST00000373201 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
PTPRT-207ENST00000373201 ARID3CA6NKF2 412 aa12.54□□□□□ -0.4
PTPRT-207ENST00000373201 TULP1O00294 542 aaPredicted RBP12.54□□□□□ -0.4
PTPRT-207ENST00000373201 ANP32CO43423 234 aa12.52□□□□□ -0.4
PTPRT-207ENST00000373201 NPM2Q86SE8 214 aaKnown RBP12.52□□□□□ -0.41
PTPRT-207ENST00000373201 CHGAP10645 457 aaKnown RBP12.5□□□□□ -0.41
PTPRT-207ENST00000373201 DIEXFQ68CQ4 756 aaKnown RBP12.45□□□□□ -0.42
PTPRT-207ENST00000373201 ZBTB7CA1YPR0 619 aa12.43□□□□□ -0.42
PTPRT-207ENST00000373201 ZNF777Q9ULD5 760 aaPredicted RBP12.43□□□□□ -0.42
PTPRT-207ENST00000373201 EIF5BO60841 1220 aaKnown RBP12.43□□□□□ -0.42
PTPRT-207ENST00000373201 NCBP3Q53F19 620 aaKnown RBP12.43□□□□□ -0.42
PTPRT-207ENST00000373201 LOC105371045A0A1W2PR82 267 aa12.43□□□□□ -0.42
PTPRT-207ENST00000373201 ANP32AP39687 249 aaKnown RBP12.42□□□□□ -0.42
PTPRT-207ENST00000373201 ARXQ96QS3 562 aa12.39□□□□□ -0.43
PTPRT-207ENST00000373201 C14orf37Q86TY3 774 aa12.37□□□□□ -0.43
PTPRT-207ENST00000373201 SENP3Q9H4L4 574 aaPredicted RBP12.37□□□□□ -0.43
PTPRT-207ENST00000373201 UPF2Q9HAU5 1272 aaKnown RBP12.35□□□□□ -0.43
PTPRT-207ENST00000373201 PABPN1Q86U42 306 aaKnown RBP eCLIP12.33□□□□□ -0.44
PTPRT-207ENST00000373201 HAP1P54257 671 aaPredicted RBP12.32□□□□□ -0.44
PTPRT-207ENST00000373201 P3H3Q8IVL6 736 aa12.31□□□□□ -0.44
PTPRT-207ENST00000373201 NPHP1O15259 732 aa12.3□□□□□ -0.44
PTPRT-207ENST00000373201 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.44
PTPRT-207ENST00000373201 SALL2Q9Y467 1007 aaPredicted RBP12.27□□□□□ -0.45
PTPRT-207ENST00000373201 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.23□□□□□ -0.45
PTPRT-207ENST00000373201 MYH16Q9H6N6 1097 aa12.22□□□□□ -0.45
PTPRT-207ENST00000373201 TAOK2Q9UL54 1235 aa12.22□□□□□ -0.45
PTPRT-207ENST00000373201 TPRNQ4KMQ1 711 aa12.2□□□□□ -0.46
PTPRT-207ENST00000373201 CLSTN1O94985 981 aa12.19□□□□□ -0.46
PTPRT-207ENST00000373201 GTF3C3Q9Y5Q9 886 aa12.17□□□□□ -0.46
PTPRT-207ENST00000373201 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.17□□□□□ -0.46
PTPRT-207ENST00000373201 GLIPR1L2Q4G1C9 344 aa12.16□□□□□ -0.46
PTPRT-207ENST00000373201 NBR1Q14596 966 aa12.14□□□□□ -0.47
PTPRT-207ENST00000373201 ARID4BQ4LE39 1312 aaPredicted RBP12.13□□□□□ -0.47
PTPRT-207ENST00000373201 PPP1R15AO75807 674 aaPredicted RBP12.13□□□□□ -0.47
PTPRT-207ENST00000373201 ZRSR1Q15695 479 aaKnown RBP12.13□□□□□ -0.47
PTPRT-207ENST00000373201 WDR43Q15061 677 aaKnown RBP eCLIP12.11□□□□□ -0.47
PTPRT-207ENST00000373201 FAM9BQ8IZU0 186 aa12.11□□□□□ -0.47
PTPRT-207ENST00000373201 PRM3Q9NNZ6 103 aa12.1□□□□□ -0.47
PTPRT-207ENST00000373201 NCLP19338 710 aaKnown RBP12.09□□□□□ -0.47
PTPRT-207ENST00000373201 LMOD2Q6P5Q4 547 aa12.08□□□□□ -0.48
PTPRT-207ENST00000373201 ABCC9O60706 1549 aa12.08□□□□□ -0.48
PTPRT-207ENST00000373201 KDM2AQ9Y2K7 1162 aa12.06□□□□□ -0.48
PTPRT-207ENST00000373201 ISY1Q9ULR0 285 aaKnown RBP12.05□□□□□ -0.48
PTPRT-207ENST00000373201 GOLGA2Q08379 1002 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 244 ms