RNA–Protein interactions for RNA: ENST00000372556.3

PPCS-201, Transcript of phosphopantothenoylcysteine synthetase, humanhuman

TSL 2 BASIC

Gene PPCS, Length 984 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPCS-201ENST00000372556 AEBP2Q6ZN18 517 aaPredicted RBP27.91■■■□□ 2.06
PPCS-201ENST00000372556 CHIC1Q5VXU3 224 aa26.5■■□□□ 1.83
PPCS-201ENST00000372556 SENP3Q9H4L4 574 aaPredicted RBP23.94■■□□□ 1.42
PPCS-201ENST00000372556 PHF23Q9BUL5 403 aaPredicted RBP23.53■■□□□ 1.36
PPCS-201ENST00000372556 FOXD1Q16676 465 aa22.22■■□□□ 1.15
PPCS-201ENST00000372556 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
PPCS-201ENST00000372556 MSH5O43196 834 aa20.95■□□□□ 0.94
PPCS-201ENST00000372556 PIAS4Q8N2W9 510 aaPredicted RBP20.77■□□□□ 0.92
PPCS-201ENST00000372556 PPP6R1Q9UPN7 881 aa20.67■□□□□ 0.9
PPCS-201ENST00000372556 ADRA2BP18089 450 aa20.59■□□□□ 0.89
PPCS-201ENST00000372556 POTEDQ86YR6 584 aa20.49■□□□□ 0.87
PPCS-201ENST00000372556 SCAF1Q9H7N4 1312 aaKnown RBP18.99■□□□□ 0.63
PPCS-201ENST00000372556 DMRT2Q9Y5R5 561 aa18.96■□□□□ 0.63
PPCS-201ENST00000372556 MAPK8IP2Q13387 824 aaPredicted RBP18.91■□□□□ 0.62
PPCS-201ENST00000372556 PPP4R3CPQ6ZMV5 832 aa18.48■□□□□ 0.55
PPCS-201ENST00000372556 HOXD11P31277 338 aaPredicted RBP18.24■□□□□ 0.51
PPCS-201ENST00000372556 CNKSR2Q8WXI2 1034 aa18.21■□□□□ 0.51
PPCS-201ENST00000372556 RNF216Q9NWF9 866 aaPredicted RBP18.08■□□□□ 0.48
PPCS-201ENST00000372556 DCAF8L1A6NGE4 600 aa18.06■□□□□ 0.48
PPCS-201ENST00000372556 CACNB1Q02641 598 aaPredicted RBP17.94■□□□□ 0.46
PPCS-201ENST00000372556 RNF39Q9H2S5 420 aa17.83■□□□□ 0.44
PPCS-201ENST00000372556 NCBP3Q53F19 620 aaKnown RBP17.81■□□□□ 0.44
PPCS-201ENST00000372556 DNAJC5BQ9UF47 199 aa17.75■□□□□ 0.43
PPCS-201ENST00000372556 C1QBPQ07021 282 aaKnown RBP17.6■□□□□ 0.41
PPCS-201ENST00000372556 NPM3O75607 178 aaKnown RBP17.48■□□□□ 0.39
PPCS-201ENST00000372556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.31■□□□□ 0.36
PPCS-201ENST00000372556 KCNA4P22459 653 aa17.03■□□□□ 0.32
PPCS-201ENST00000372556 U3KPZ7 1027 aaPredicted RBP16.95■□□□□ 0.3
PPCS-201ENST00000372556 SLC4A2P04920 1241 aa16.7■□□□□ 0.26
PPCS-201ENST00000372556 CAPN15O75808 1086 aa16.67■□□□□ 0.26
PPCS-201ENST00000372556 SPINK5Q9NQ38 1064 aaPredicted RBP16.67■□□□□ 0.26
PPCS-201ENST00000372556 DSG3P32926 999 aa16.64■□□□□ 0.25
PPCS-201ENST00000372556 APLP2Q06481 763 aa16.6■□□□□ 0.25
PPCS-201ENST00000372556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.55■□□□□ 0.24
PPCS-201ENST00000372556 HNRNPUL2Q1KMD3 747 aaKnown RBP16.55■□□□□ 0.24
PPCS-201ENST00000372556 ZNF219Q9P2Y4 722 aaPredicted RBP16.46■□□□□ 0.23
PPCS-201ENST00000372556 SAMD1Q6SPF0 538 aaPredicted RBP16.42■□□□□ 0.22
PPCS-201ENST00000372556 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
PPCS-201ENST00000372556 MYCNP04198 464 aaPredicted RBP16.24■□□□□ 0.19
PPCS-201ENST00000372556 ABCB7O75027 752 aa16.23■□□□□ 0.19
PPCS-201ENST00000372556 SLC4A1APQ9BWU0 796 aaKnown RBP16.1■□□□□ 0.17
PPCS-201ENST00000372556 POTEHQ6S545 545 aa16.07■□□□□ 0.16
PPCS-201ENST00000372556 FOXD4L1Q9NU39 408 aa16■□□□□ 0.15
PPCS-201ENST00000372556 RBM42Q9BTD8 480 aaKnown RBP15.97■□□□□ 0.15
PPCS-201ENST00000372556 POLA2Q14181 598 aa15.93■□□□□ 0.14
PPCS-201ENST00000372556 ZBTB12Q9Y330 459 aaPredicted RBP15.75■□□□□ 0.11
PPCS-201ENST00000372556 ATF5Q9Y2D1 282 aaPredicted RBP15.74■□□□□ 0.11
PPCS-201ENST00000372556 ZBTB22O15209 634 aa15.65■□□□□ 0.1
PPCS-201ENST00000372556 ATXN8OSP0DMR3 200 aa15.59■□□□□ 0.09
PPCS-201ENST00000372556 CHRDL2Q6WN34 429 aa15.58■□□□□ 0.08
PPCS-201ENST00000372556 AKT1S1Q96B36 256 aa15.55■□□□□ 0.08
PPCS-201ENST00000372556 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
PPCS-201ENST00000372556 REM2Q8IYK8 340 aaPredicted RBP15.34■□□□□ 0.05
PPCS-201ENST00000372556 FBLN2P98095 1184 aa15.24■□□□□ 0.03
PPCS-201ENST00000372556 SPDYE2BA6NHP3 402 aa15.2■□□□□ 0.02
PPCS-201ENST00000372556 SPDYE6P0CI01 402 aa15.2■□□□□ 0.02
PPCS-201ENST00000372556 SPDYE2Q495Y8 402 aa15.2■□□□□ 0.02
PPCS-201ENST00000372556 PITPNM1O00562 1244 aa15.18■□□□□ 0.02
PPCS-201ENST00000372556 PIP4P2Q8N4L2 257 aa15.17■□□□□ 0.02
PPCS-201ENST00000372556 FXR2P51116 673 aaKnown RBP eCLIP15.1■□□□□ 0.01
PPCS-201ENST00000372556 NISCHQ9Y2I1 1504 aa15.06■□□□□ 0
PPCS-201ENST00000372556 MKRN4PQ13434 485 aaPredicted RBP15.05■□□□□ -0
PPCS-201ENST00000372556 SP7Q8TDD2 431 aaPredicted RBP15.04■□□□□ -0
PPCS-201ENST00000372556 SSUH2Q9Y2M2 353 aa14.98□□□□□ -0.01
PPCS-201ENST00000372556 SPDYE1Q8NFV5 336 aaPredicted RBP14.94□□□□□ -0.02
PPCS-201ENST00000372556 ZNF692Q9BU19 519 aaPredicted RBP14.93□□□□□ -0.02
PPCS-201ENST00000372556 HAX1O00165 279 aa14.88□□□□□ -0.03
PPCS-201ENST00000372556 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
PPCS-201ENST00000372556 CLEC11AQ9Y240 323 aa14.81□□□□□ -0.04
PPCS-201ENST00000372556 PRKAR2AP13861 404 aaKnown RBP14.77□□□□□ -0.05
PPCS-201ENST00000372556 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
PPCS-201ENST00000372556 EVX2Q03828 476 aa14.64□□□□□ -0.07
PPCS-201ENST00000372556 C19orf67A6NJJ6 358 aa14.62□□□□□ -0.07
PPCS-201ENST00000372556 PRR29P0C7W0 189 aa14.61□□□□□ -0.07
PPCS-201ENST00000372556 EHMT2Q96KQ7 1210 aa14.56□□□□□ -0.08
PPCS-201ENST00000372556 CHADLQ6NUI6 762 aa14.52□□□□□ -0.09
PPCS-201ENST00000372556 FARP1Q9Y4F1 1045 aaPredicted RBP14.39□□□□□ -0.11
PPCS-201ENST00000372556 GABBR2O75899 941 aa14.38□□□□□ -0.11
PPCS-201ENST00000372556 STAG3Q9UJ98 1225 aa14.37□□□□□ -0.11
PPCS-201ENST00000372556 SPDYE4A6NLX3 237 aa14.33□□□□□ -0.12
PPCS-201ENST00000372556 CD44P16070 742 aaKnown RBP14.31□□□□□ -0.12
PPCS-201ENST00000372556 CLCN6P51797 869 aa14.29□□□□□ -0.12
PPCS-201ENST00000372556 CREBZFQ9NS37 354 aa14.22□□□□□ -0.13
PPCS-201ENST00000372556 ZNF579Q8NAF0 562 aaKnown RBP14.14□□□□□ -0.15
PPCS-201ENST00000372556 LHX8Q68G74 356 aa14.07□□□□□ -0.16
PPCS-201ENST00000372556 ZRANB1Q9UGI0 708 aa14.07□□□□□ -0.16
PPCS-201ENST00000372556 POTEIP0CG38 1075 aa14.04□□□□□ -0.16
PPCS-201ENST00000372556 PROM2Q8N271 834 aa14.04□□□□□ -0.16
PPCS-201ENST00000372556 NPM1P06748 294 aaKnown RBP eCLIP14.02□□□□□ -0.17
PPCS-201ENST00000372556 PAK3O75914 559 aaPredicted RBP14.01□□□□□ -0.17
PPCS-201ENST00000372556 DCBLD2Q96PD2 775 aa13.99□□□□□ -0.17
PPCS-201ENST00000372556 MNX1P50219 401 aaPredicted RBP13.98□□□□□ -0.17
PPCS-201ENST00000372556 GALR2O43603 387 aaPredicted RBP13.89□□□□□ -0.19
PPCS-201ENST00000372556 PHF12Q96QT6 1004 aa13.85□□□□□ -0.19
PPCS-201ENST00000372556 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
PPCS-201ENST00000372556 MS4A3Q96HJ5 214 aa13.68□□□□□ -0.22
PPCS-201ENST00000372556 ASTLQ6HA08 431 aaPredicted RBP13.67□□□□□ -0.22
PPCS-201ENST00000372556 CCDC61Q9Y6R9 512 aa13.67□□□□□ -0.22
PPCS-201ENST00000372556 TSPYL2Q9H2G4 693 aaPredicted RBP13.65□□□□□ -0.22
PPCS-201ENST00000372556 MIER1Q8N108 512 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms