RNA–Protein interactions for RNA: ENST00000372408.7

KCNMA1-205, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-205ENST00000372408 NISCHQ9Y2I1 1504 aa21.35■■□□□ 1.01
KCNMA1-205ENST00000372408 SHROOM4Q9ULL8 1493 aa18.6■□□□□ 0.57
KCNMA1-205ENST00000372408 SUPT5HO00267 1087 aaKnown RBP18.34■□□□□ 0.53
KCNMA1-205ENST00000372408 DCAF8L2P0C7V8 631 aa18.07■□□□□ 0.48
KCNMA1-205ENST00000372408 ZCCHC6Q5VYS8 1495 aaKnown RBP18.05■□□□□ 0.48
KCNMA1-205ENST00000372408 CCDC180Q9P1Z9 1646 aa17.95■□□□□ 0.46
KCNMA1-205ENST00000372408 CHIC1Q5VXU3 224 aa17.75■□□□□ 0.43
KCNMA1-205ENST00000372408 MYO15BQ96JP2 1530 aa17.65■□□□□ 0.42
KCNMA1-205ENST00000372408 PCGF6Q9BYE7 350 aa17.47■□□□□ 0.39
KCNMA1-205ENST00000372408 HRCP23327 699 aa17.45■□□□□ 0.38
KCNMA1-205ENST00000372408 DCAF1Q9Y4B6 1507 aa17.39■□□□□ 0.37
KCNMA1-205ENST00000372408 LOC105371045A0A1W2PR82 267 aa17.33■□□□□ 0.36
KCNMA1-205ENST00000372408 PPARGC1BQ86YN6 1023 aaKnown RBP17.17■□□□□ 0.34
KCNMA1-205ENST00000372408 SCRIBQ14160 1630 aa17.05■□□□□ 0.32
KCNMA1-205ENST00000372408 ABCC9O60706 1549 aa17.04■□□□□ 0.32
KCNMA1-205ENST00000372408 TRIM41Q8WV44 630 aa17.01■□□□□ 0.31
KCNMA1-205ENST00000372408 RSF1Q96T23 1441 aaPredicted RBP17■□□□□ 0.31
KCNMA1-205ENST00000372408 TRIM26Q12899 539 aaPredicted RBP17■□□□□ 0.31
KCNMA1-205ENST00000372408 FAM9AQ8IZU1 332 aaPredicted RBP16.99■□□□□ 0.31
KCNMA1-205ENST00000372408 EHMT2Q96KQ7 1210 aa16.93■□□□□ 0.3
KCNMA1-205ENST00000372408 RB1CC1Q8TDY2 1594 aa16.84■□□□□ 0.29
KCNMA1-205ENST00000372408 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
KCNMA1-205ENST00000372408 ZEB1P37275 1124 aaPredicted RBP16.68■□□□□ 0.26
KCNMA1-205ENST00000372408 NACADO15069 1562 aa16.65■□□□□ 0.26
KCNMA1-205ENST00000372408 MROH2BQ7Z745 1585 aa16.65■□□□□ 0.26
KCNMA1-205ENST00000372408 WIZO95785 1651 aa16.55■□□□□ 0.24
KCNMA1-205ENST00000372408 TTBK1Q5TCY1 1321 aaPredicted RBP16.41■□□□□ 0.22
KCNMA1-205ENST00000372408 BAZ1AQ9NRL2 1556 aaPredicted RBP16.39■□□□□ 0.21
KCNMA1-205ENST00000372408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.39■□□□□ 0.21
KCNMA1-205ENST00000372408 CCER1Q8TC90 406 aaPredicted RBP16.37■□□□□ 0.21
KCNMA1-205ENST00000372408 ABCC8Q09428 1581 aa16.3■□□□□ 0.2
KCNMA1-205ENST00000372408 CCDC88BA6NC98 1476 aa16.27■□□□□ 0.19
KCNMA1-205ENST00000372408 TOP2AP11388 1531 aaKnown RBP16.25■□□□□ 0.19
KCNMA1-205ENST00000372408 EIF4G1Q04637 1599 aaKnown RBP16.25■□□□□ 0.19
KCNMA1-205ENST00000372408 UBTFP17480 764 aaKnown RBP16.24■□□□□ 0.19
KCNMA1-205ENST00000372408 SMARCA4P51532 1647 aa16.21■□□□□ 0.19
KCNMA1-205ENST00000372408 SOGA1O94964 1423 aa16.2■□□□□ 0.18
KCNMA1-205ENST00000372408 PABPN1Q86U42 306 aaKnown RBP eCLIP16.2■□□□□ 0.18
KCNMA1-205ENST00000372408 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
KCNMA1-205ENST00000372408 CEP162Q5TB80 1403 aa16.18■□□□□ 0.18
KCNMA1-205ENST00000372408 SMARCA2P51531 1590 aa16.18■□□□□ 0.18
KCNMA1-205ENST00000372408 CSRNP3Q8WYN3 585 aa16.17■□□□□ 0.18
KCNMA1-205ENST00000372408 TNIKQ9UKE5 1360 aa16.11■□□□□ 0.17
KCNMA1-205ENST00000372408 RUSC2Q8N2Y8 1516 aa16.1■□□□□ 0.17
KCNMA1-205ENST00000372408 WRNQ14191 1432 aaPredicted RBP eCLIP16.1■□□□□ 0.17
KCNMA1-205ENST00000372408 DIEXFQ68CQ4 756 aaKnown RBP16.07■□□□□ 0.16
KCNMA1-205ENST00000372408 UNC13AQ9UPW8 1703 aa16.05■□□□□ 0.16
KCNMA1-205ENST00000372408 EEA1Q15075 1411 aa16.05■□□□□ 0.16
KCNMA1-205ENST00000372408 GOLGA3Q08378 1498 aa16■□□□□ 0.15
KCNMA1-205ENST00000372408 ACIN1Q9UKV3 1341 aaKnown RBP15.99■□□□□ 0.15
KCNMA1-205ENST00000372408 RANGAP1P46060 587 aaPredicted RBP15.99■□□□□ 0.15
KCNMA1-205ENST00000372408 NEUROD1Q13562 356 aa15.99■□□□□ 0.15
KCNMA1-205ENST00000372408 HNRNPUL2Q1KMD3 747 aaKnown RBP15.98■□□□□ 0.15
KCNMA1-205ENST00000372408 PELP1Q8IZL8 1130 aaKnown RBP15.97■□□□□ 0.15
KCNMA1-205ENST00000372408 CENPBP07199 599 aaPredicted RBP15.94■□□□□ 0.14
KCNMA1-205ENST00000372408 APLP2Q06481 763 aa15.92■□□□□ 0.14
KCNMA1-205ENST00000372408 BICRAQ9NZM4 1560 aa15.9■□□□□ 0.14
KCNMA1-205ENST00000372408 ZNF316A6NFI3 1004 aaPredicted RBP15.89■□□□□ 0.13
KCNMA1-205ENST00000372408 CEP164Q9UPV0 1460 aa15.88■□□□□ 0.13
KCNMA1-205ENST00000372408 CLIP1P30622 1438 aa15.88■□□□□ 0.13
KCNMA1-205ENST00000372408 GTF3C3Q9Y5Q9 886 aa15.87■□□□□ 0.13
KCNMA1-205ENST00000372408 SYNJ1O43426 1573 aa15.86■□□□□ 0.13
KCNMA1-205ENST00000372408 BAZ1BQ9UIG0 1483 aaKnown RBP15.82■□□□□ 0.12
KCNMA1-205ENST00000372408 YTHDC1Q96MU7 727 aaKnown RBP15.82■□□□□ 0.12
KCNMA1-205ENST00000372408 ATAD2BQ9ULI0 1458 aa15.82■□□□□ 0.12
KCNMA1-205ENST00000372408 PEG3Q9GZU2 1588 aa15.8■□□□□ 0.12
KCNMA1-205ENST00000372408 RAPGEF2Q9Y4G8 1499 aa15.78■□□□□ 0.12
KCNMA1-205ENST00000372408 VPS8Q8N3P4 1428 aa15.77■□□□□ 0.12
KCNMA1-205ENST00000372408 KIF21BO75037 1637 aa15.77■□□□□ 0.11
KCNMA1-205ENST00000372408 MIER1Q8N108 512 aa15.7■□□□□ 0.1
KCNMA1-205ENST00000372408 TOP2BQ02880 1626 aa15.6■□□□□ 0.09
KCNMA1-205ENST00000372408 KANK4Q5T7N3 995 aaPredicted RBP15.59■□□□□ 0.09
KCNMA1-205ENST00000372408 ITGAEP38570 1179 aa15.55■□□□□ 0.08
KCNMA1-205ENST00000372408 PRXQ9BXM0 1461 aa15.53■□□□□ 0.08
KCNMA1-205ENST00000372408 ARAP1Q96P48 1450 aa15.52■□□□□ 0.07
KCNMA1-205ENST00000372408 KIF27Q86VH2 1401 aa15.51■□□□□ 0.07
KCNMA1-205ENST00000372408 DHX57Q6P158 1386 aaKnown RBP15.5■□□□□ 0.07
KCNMA1-205ENST00000372408 ERICH3Q5RHP9 1530 aa15.5■□□□□ 0.07
KCNMA1-205ENST00000372408 BIVM-ERCC5R4GMW8 1640 aa15.49■□□□□ 0.07
KCNMA1-205ENST00000372408 CUX1P39880 1505 aa15.47■□□□□ 0.07
KCNMA1-205ENST00000372408 CLSPNQ9HAW4 1339 aa15.47■□□□□ 0.07
KCNMA1-205ENST00000372408 NCAPD3P42695 1498 aa15.44■□□□□ 0.06
KCNMA1-205ENST00000372408 CCNB3Q8WWL7 1395 aa15.41■□□□□ 0.06
KCNMA1-205ENST00000372408 HMGXB3Q12766 1538 aa15.4■□□□□ 0.06
KCNMA1-205ENST00000372408 ARHGAP35Q9NRY4 1499 aa15.38■□□□□ 0.05
KCNMA1-205ENST00000372408 RRBP1Q9P2E9 1410 aaKnown RBP15.38■□□□□ 0.05
KCNMA1-205ENST00000372408 CFTRP13569 1480 aa15.37■□□□□ 0.05
KCNMA1-205ENST00000372408 ATP1B4Q9UN42 357 aaPredicted RBP15.37■□□□□ 0.05
KCNMA1-205ENST00000372408 CUX2O14529 1486 aa15.36■□□□□ 0.05
KCNMA1-205ENST00000372408 P3H3Q8IVL6 736 aa15.33■□□□□ 0.05
KCNMA1-205ENST00000372408 FAM50AQ14320 339 aaKnown RBP15.32■□□□□ 0.04
KCNMA1-205ENST00000372408 IGF1RP08069 1367 aa15.32■□□□□ 0.04
KCNMA1-205ENST00000372408 CARMIL1Q5VZK9 1371 aa15.3■□□□□ 0.04
KCNMA1-205ENST00000372408 RAB3GAP2Q9H2M9 1393 aa15.29■□□□□ 0.04
KCNMA1-205ENST00000372408 MYT1Q01538 1121 aa15.28■□□□□ 0.04
KCNMA1-205ENST00000372408 CADPSQ9ULU8 1353 aa15.24■□□□□ 0.03
KCNMA1-205ENST00000372408 FGD5Q6ZNL6 1462 aa15.23■□□□□ 0.03
KCNMA1-205ENST00000372408 SIN3AQ96ST3 1273 aa15.22■□□□□ 0.03
KCNMA1-205ENST00000372408 SETD5Q9C0A6 1442 aa15.21■□□□□ 0.03
KCNMA1-205ENST00000372408 SUPT16HQ9Y5B9 1047 aaKnown RBP15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms