RNA–Protein interactions for RNA: ENST00000370792.7

USP33-202, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 1 (best) BASIC

Gene USP33, Length 2,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-202ENST00000370792 NISCHQ9Y2I1 1504 aa29.23■■■□□ 2.27
USP33-202ENST00000370792 SHROOM4Q9ULL8 1493 aa25.35■■□□□ 1.65
USP33-202ENST00000370792 SUPT5HO00267 1087 aaKnown RBP24.89■■□□□ 1.58
USP33-202ENST00000370792 ZCCHC6Q5VYS8 1495 aaKnown RBP24.73■■□□□ 1.55
USP33-202ENST00000370792 CCDC180Q9P1Z9 1646 aa24.64■■□□□ 1.53
USP33-202ENST00000370792 DCAF8L2P0C7V8 631 aa24.54■■□□□ 1.52
USP33-202ENST00000370792 CHIC1Q5VXU3 224 aa24.13■■□□□ 1.45
USP33-202ENST00000370792 MYO15BQ96JP2 1530 aa24.13■■□□□ 1.45
USP33-202ENST00000370792 DCAF1Q9Y4B6 1507 aa23.82■■□□□ 1.4
USP33-202ENST00000370792 PCGF6Q9BYE7 350 aa23.63■■□□□ 1.37
USP33-202ENST00000370792 HRCP23327 699 aa23.6■■□□□ 1.37
USP33-202ENST00000370792 LOC105371045A0A1W2PR82 267 aa23.55■■□□□ 1.36
USP33-202ENST00000370792 SCRIBQ14160 1630 aa23.38■■□□□ 1.33
USP33-202ENST00000370792 ABCC9O60706 1549 aa23.36■■□□□ 1.33
USP33-202ENST00000370792 PPARGC1BQ86YN6 1023 aaKnown RBP23.29■■□□□ 1.32
USP33-202ENST00000370792 RSF1Q96T23 1441 aaPredicted RBP23.24■■□□□ 1.31
USP33-202ENST00000370792 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
USP33-202ENST00000370792 TRIM41Q8WV44 630 aa23.06■■□□□ 1.28
USP33-202ENST00000370792 FAM9AQ8IZU1 332 aaPredicted RBP23.05■■□□□ 1.28
USP33-202ENST00000370792 TRIM26Q12899 539 aaPredicted RBP23■■□□□ 1.27
USP33-202ENST00000370792 EHMT2Q96KQ7 1210 aa22.99■■□□□ 1.27
USP33-202ENST00000370792 CECR2Q9BXF3 1484 aa22.92■■□□□ 1.26
USP33-202ENST00000370792 MROH2BQ7Z745 1585 aa22.81■■□□□ 1.24
USP33-202ENST00000370792 NACADO15069 1562 aa22.8■■□□□ 1.24
USP33-202ENST00000370792 WIZO95785 1651 aa22.71■■□□□ 1.23
USP33-202ENST00000370792 PELP1Q8IZL8 1130 aaKnown RBP22.48■■□□□ 1.19
USP33-202ENST00000370792 BAZ1AQ9NRL2 1556 aaPredicted RBP22.46■■□□□ 1.19
USP33-202ENST00000370792 ZEB1P37275 1124 aaPredicted RBP22.46■■□□□ 1.19
USP33-202ENST00000370792 EIF4G1Q04637 1599 aaKnown RBP22.35■■□□□ 1.17
USP33-202ENST00000370792 ABCC8Q09428 1581 aa22.31■■□□□ 1.16
USP33-202ENST00000370792 TTBK1Q5TCY1 1321 aaPredicted RBP22.26■■□□□ 1.15
USP33-202ENST00000370792 TOP2AP11388 1531 aaKnown RBP22.25■■□□□ 1.15
USP33-202ENST00000370792 CCDC88BA6NC98 1476 aa22.25■■□□□ 1.15
USP33-202ENST00000370792 SMARCA4P51532 1647 aa22.23■■□□□ 1.15
USP33-202ENST00000370792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.22■■□□□ 1.15
USP33-202ENST00000370792 SMARCA2P51531 1590 aa22.17■■□□□ 1.14
USP33-202ENST00000370792 PABPN1Q86U42 306 aaKnown RBP eCLIP22.15■■□□□ 1.14
USP33-202ENST00000370792 UNC13AQ9UPW8 1703 aa22.14■■□□□ 1.14
USP33-202ENST00000370792 SOGA1O94964 1423 aa22.13■■□□□ 1.13
USP33-202ENST00000370792 CCER1Q8TC90 406 aaPredicted RBP22.1■■□□□ 1.13
USP33-202ENST00000370792 CEP162Q5TB80 1403 aa22.04■■□□□ 1.12
USP33-202ENST00000370792 RUSC2Q8N2Y8 1516 aa22.04■■□□□ 1.12
USP33-202ENST00000370792 UBTFP17480 764 aaKnown RBP22■■□□□ 1.11
USP33-202ENST00000370792 CSRNP3Q8WYN3 585 aa21.96■■□□□ 1.11
USP33-202ENST00000370792 WRNQ14191 1432 aaPredicted RBP eCLIP21.93■■□□□ 1.1
USP33-202ENST00000370792 TNIKQ9UKE5 1360 aa21.92■■□□□ 1.1
USP33-202ENST00000370792 MYT1Q01538 1121 aa21.9■■□□□ 1.1
USP33-202ENST00000370792 SCAF1Q9H7N4 1312 aaKnown RBP21.9■■□□□ 1.1
USP33-202ENST00000370792 BICRAQ9NZM4 1560 aa21.89■■□□□ 1.09
USP33-202ENST00000370792 EEA1Q15075 1411 aa21.83■■□□□ 1.08
USP33-202ENST00000370792 GOLGA3Q08378 1498 aa21.79■■□□□ 1.08
USP33-202ENST00000370792 SYNJ1O43426 1573 aa21.73■■□□□ 1.07
USP33-202ENST00000370792 RANGAP1P46060 587 aaPredicted RBP21.71■■□□□ 1.07
USP33-202ENST00000370792 DIEXFQ68CQ4 756 aaKnown RBP21.71■■□□□ 1.07
USP33-202ENST00000370792 PEG3Q9GZU2 1588 aa21.68■■□□□ 1.06
USP33-202ENST00000370792 ATAD2BQ9ULI0 1458 aa21.66■■□□□ 1.06
USP33-202ENST00000370792 HNRNPUL2Q1KMD3 747 aaKnown RBP21.65■■□□□ 1.06
USP33-202ENST00000370792 BAZ1BQ9UIG0 1483 aaKnown RBP21.63■■□□□ 1.05
USP33-202ENST00000370792 CEP164Q9UPV0 1460 aa21.63■■□□□ 1.05
USP33-202ENST00000370792 NEUROD1Q13562 356 aa21.63■■□□□ 1.05
USP33-202ENST00000370792 CLIP1P30622 1438 aa21.6■■□□□ 1.05
USP33-202ENST00000370792 ACIN1Q9UKV3 1341 aaKnown RBP21.59■■□□□ 1.05
USP33-202ENST00000370792 RAPGEF2Q9Y4G8 1499 aa21.55■■□□□ 1.04
USP33-202ENST00000370792 KIF21BO75037 1637 aa21.55■■□□□ 1.04
USP33-202ENST00000370792 VPS8Q8N3P4 1428 aa21.48■■□□□ 1.03
USP33-202ENST00000370792 ZNF316A6NFI3 1004 aaPredicted RBP21.47■■□□□ 1.03
USP33-202ENST00000370792 APLP2Q06481 763 aa21.47■■□□□ 1.03
USP33-202ENST00000370792 GTF3C3Q9Y5Q9 886 aa21.42■■□□□ 1.02
USP33-202ENST00000370792 CENPBP07199 599 aaPredicted RBP21.41■■□□□ 1.02
USP33-202ENST00000370792 YTHDC1Q96MU7 727 aaKnown RBP21.37■■□□□ 1.01
USP33-202ENST00000370792 TOP2BQ02880 1626 aa21.37■■□□□ 1.01
USP33-202ENST00000370792 MIER1Q8N108 512 aa21.27■■□□□ 1
USP33-202ENST00000370792 BIVM-ERCC5R4GMW8 1640 aa21.25■□□□□ 0.99
USP33-202ENST00000370792 KANK4Q5T7N3 995 aaPredicted RBP21.24■□□□□ 0.99
USP33-202ENST00000370792 ARAP1Q96P48 1450 aa21.22■□□□□ 0.99
USP33-202ENST00000370792 PRXQ9BXM0 1461 aa21.22■□□□□ 0.99
USP33-202ENST00000370792 CUX1P39880 1505 aa21.21■□□□□ 0.99
USP33-202ENST00000370792 ERICH3Q5RHP9 1530 aa21.17■□□□□ 0.98
USP33-202ENST00000370792 NCAPD3P42695 1498 aa21.15■□□□□ 0.98
USP33-202ENST00000370792 KIF27Q86VH2 1401 aa21.12■□□□□ 0.97
USP33-202ENST00000370792 HMGXB3Q12766 1538 aa21.12■□□□□ 0.97
USP33-202ENST00000370792 DHX57Q6P158 1386 aaKnown RBP21.1■□□□□ 0.97
USP33-202ENST00000370792 ITGAEP38570 1179 aa21.08■□□□□ 0.96
USP33-202ENST00000370792 CFTRP13569 1480 aa21.05■□□□□ 0.96
USP33-202ENST00000370792 ARHGAP35Q9NRY4 1499 aa21.01■□□□□ 0.95
USP33-202ENST00000370792 CUX2O14529 1486 aa20.96■□□□□ 0.95
USP33-202ENST00000370792 RRBP1Q9P2E9 1410 aaKnown RBP20.96■□□□□ 0.95
USP33-202ENST00000370792 CCNB3Q8WWL7 1395 aa20.94■□□□□ 0.94
USP33-202ENST00000370792 CLSPNQ9HAW4 1339 aa20.93■□□□□ 0.94
USP33-202ENST00000370792 IGF1RP08069 1367 aa20.91■□□□□ 0.94
USP33-202ENST00000370792 P3H3Q8IVL6 736 aa20.86■□□□□ 0.93
USP33-202ENST00000370792 CARMIL1Q5VZK9 1371 aa20.84■□□□□ 0.93
USP33-202ENST00000370792 FGD5Q6ZNL6 1462 aa20.83■□□□□ 0.92
USP33-202ENST00000370792 ATP1B4Q9UN42 357 aaPredicted RBP20.83■□□□□ 0.92
USP33-202ENST00000370792 CADPSQ9ULU8 1353 aa20.82■□□□□ 0.92
USP33-202ENST00000370792 RAB3GAP2Q9H2M9 1393 aa20.8■□□□□ 0.92
USP33-202ENST00000370792 FAM50AQ14320 339 aaKnown RBP20.77■□□□□ 0.91
USP33-202ENST00000370792 TIAM1Q13009 1591 aa20.76■□□□□ 0.91
USP33-202ENST00000370792 PRDM2Q13029 1718 aa20.76■□□□□ 0.91
USP33-202ENST00000370792 PHLDB1Q86UU1 1377 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms