RNA–Protein interactions for RNA: ENST00000369239.9

PNISR-201, Transcript of PNN interacting serine and arginine rich protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNISR, Length 5,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNISR-201ENST00000369239 CHIC1Q5VXU3 224 aa9.21□□□□□ -0.94
PNISR-201ENST00000369239 AEBP2Q6ZN18 517 aaPredicted RBP8.75□□□□□ -1.01
PNISR-201ENST00000369239 EHMT2Q96KQ7 1210 aa8.73□□□□□ -1.01
PNISR-201ENST00000369239 SLC24A1O60721 1099 aa8.33□□□□□ -1.08
PNISR-201ENST00000369239 PHF23Q9BUL5 403 aaPredicted RBP8.16□□□□□ -1.1
PNISR-201ENST00000369239 PLPPR3Q6T4P5 718 aa7.95□□□□□ -1.14
PNISR-201ENST00000369239 KCNA4P22459 653 aa7.88□□□□□ -1.15
PNISR-201ENST00000369239 RTN4Q9NQC3 1192 aaKnown RBP7.81□□□□□ -1.16
PNISR-201ENST00000369239 SLC4A1APQ9BWU0 796 aaKnown RBP7.73□□□□□ -1.17
PNISR-201ENST00000369239 CSRNP3Q8WYN3 585 aa7.69□□□□□ -1.18
PNISR-201ENST00000369239 AMER1Q5JTC6 1135 aaPredicted RBP7.66□□□□□ -1.18
PNISR-201ENST00000369239 DCAF8L2P0C7V8 631 aa7.58□□□□□ -1.2
PNISR-201ENST00000369239 ADRA2BP18089 450 aa7.55□□□□□ -1.2
PNISR-201ENST00000369239 PRKCSHP14314 528 aaPredicted RBP7.46□□□□□ -1.22
PNISR-201ENST00000369239 SENP3Q9H4L4 574 aaPredicted RBP7.41□□□□□ -1.22
PNISR-201ENST00000369239 HAP1P54257 671 aaPredicted RBP7.39□□□□□ -1.23
PNISR-201ENST00000369239 NCBP3Q53F19 620 aaKnown RBP7.31□□□□□ -1.24
PNISR-201ENST00000369239 FKBP8Q14318 412 aa7.28□□□□□ -1.24
PNISR-201ENST00000369239 TPRNQ4KMQ1 711 aa7.25□□□□□ -1.25
PNISR-201ENST00000369239 RANGAP1P46060 587 aaPredicted RBP7.24□□□□□ -1.25
PNISR-201ENST00000369239 BCANQ96GW7 911 aa7.21□□□□□ -1.26
PNISR-201ENST00000369239 TULP1O00294 542 aaPredicted RBP7.19□□□□□ -1.26
PNISR-201ENST00000369239 DAXXQ9UER7 740 aaPredicted RBP7.18□□□□□ -1.26
PNISR-201ENST00000369239 PPP4R3CPQ6ZMV5 832 aa7.16□□□□□ -1.26
PNISR-201ENST00000369239 TAOK2Q9UL54 1235 aa7.13□□□□□ -1.27
PNISR-201ENST00000369239 PPP6R1Q9UPN7 881 aa7.13□□□□□ -1.27
PNISR-201ENST00000369239 ZBTB22O15209 634 aa7.07□□□□□ -1.28
PNISR-201ENST00000369239 NPM3O75607 178 aaKnown RBP7.04□□□□□ -1.28
PNISR-201ENST00000369239 PLCB2Q00722 1185 aa7.04□□□□□ -1.28
PNISR-201ENST00000369239 TIMELESSQ9UNS1 1208 aa7.03□□□□□ -1.28
PNISR-201ENST00000369239 CFAP44Q96MT7 982 aa6.98□□□□□ -1.29
PNISR-201ENST00000369239 C14orf37Q86TY3 774 aa6.97□□□□□ -1.29
PNISR-201ENST00000369239 HOMEZQ8IX15 550 aa6.97□□□□□ -1.29
PNISR-201ENST00000369239 FOXD4L1Q9NU39 408 aa6.96□□□□□ -1.3
PNISR-201ENST00000369239 PODXL2Q9NZ53 605 aa6.94□□□□□ -1.3
PNISR-201ENST00000369239 ARXQ96QS3 562 aa6.92□□□□□ -1.3
PNISR-201ENST00000369239 NBR1Q14596 966 aa6.91□□□□□ -1.3
PNISR-201ENST00000369239 GTF3C3Q9Y5Q9 886 aa6.9□□□□□ -1.3
PNISR-201ENST00000369239 PIAS4Q8N2W9 510 aaPredicted RBP6.88□□□□□ -1.31
PNISR-201ENST00000369239 SUPT5HO00267 1087 aaKnown RBP6.88□□□□□ -1.31
PNISR-201ENST00000369239 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.87□□□□□ -1.31
PNISR-201ENST00000369239 PAXIP1Q6ZW49 1069 aaPredicted RBP6.86□□□□□ -1.31
PNISR-201ENST00000369239 FOXD1Q16676 465 aa6.79□□□□□ -1.32
PNISR-201ENST00000369239 VSIG10Q8N0Z9 540 aa6.77□□□□□ -1.33
PNISR-201ENST00000369239 FBLN2P98095 1184 aa6.76□□□□□ -1.33
PNISR-201ENST00000369239 ARID3AQ99856 593 aa6.76□□□□□ -1.33
PNISR-201ENST00000369239 ERICH6Q7L0X2 663 aa6.71□□□□□ -1.33
PNISR-201ENST00000369239 NPM2Q86SE8 214 aaKnown RBP6.71□□□□□ -1.34
PNISR-201ENST00000369239 KLHL34Q8N239 644 aa6.71□□□□□ -1.34
PNISR-201ENST00000369239 CNKSR2Q8WXI2 1034 aa6.68□□□□□ -1.34
PNISR-201ENST00000369239 SCAF1Q9H7N4 1312 aaKnown RBP6.68□□□□□ -1.34
PNISR-201ENST00000369239 PELP1Q8IZL8 1130 aaKnown RBP6.67□□□□□ -1.34
PNISR-201ENST00000369239 KDM2AQ9Y2K7 1162 aa6.65□□□□□ -1.35
PNISR-201ENST00000369239 TMEM132AQ24JP5 1023 aa6.62□□□□□ -1.35
PNISR-201ENST00000369239 FBXO3Q9UK99 471 aa6.61□□□□□ -1.35
PNISR-201ENST00000369239 TSHZ2Q9NRE2 1034 aa6.6□□□□□ -1.35
PNISR-201ENST00000369239 SPRYD3Q8NCJ5 442 aa6.58□□□□□ -1.36
PNISR-201ENST00000369239 ECM2O94769 699 aaPredicted RBP6.58□□□□□ -1.36
PNISR-201ENST00000369239 MYT1LQ9UL68 1186 aa6.57□□□□□ -1.36
PNISR-201ENST00000369239 MYT1Q01538 1121 aa6.55□□□□□ -1.36
PNISR-201ENST00000369239 DCAF8L1A6NGE4 600 aa6.54□□□□□ -1.36
PNISR-201ENST00000369239 CHGAP10645 457 aaKnown RBP6.54□□□□□ -1.36
PNISR-201ENST00000369239 VASPP50552 380 aaPredicted RBP6.49□□□□□ -1.37
PNISR-201ENST00000369239 UBTFP17480 764 aaKnown RBP6.49□□□□□ -1.37
PNISR-201ENST00000369239 TRIM41Q8WV44 630 aa6.48□□□□□ -1.37
PNISR-201ENST00000369239 CIZ1Q9ULV3 898 aaPredicted RBP6.48□□□□□ -1.37
PNISR-201ENST00000369239 TRIM26Q12899 539 aaPredicted RBP6.48□□□□□ -1.37
PNISR-201ENST00000369239 BBXQ8WY36 941 aaPredicted RBP6.47□□□□□ -1.37
PNISR-201ENST00000369239 MYCNP04198 464 aaPredicted RBP6.47□□□□□ -1.37
PNISR-201ENST00000369239 MAPK8IP2Q13387 824 aaPredicted RBP6.47□□□□□ -1.37
PNISR-201ENST00000369239 NEUROD2Q15784 382 aa6.46□□□□□ -1.38
PNISR-201ENST00000369239 ATP1B4Q9UN42 357 aaPredicted RBP6.43□□□□□ -1.38
PNISR-201ENST00000369239 TTBK1Q5TCY1 1321 aaPredicted RBP6.42□□□□□ -1.38
PNISR-201ENST00000369239 SPDYE4A6NLX3 237 aa6.42□□□□□ -1.38
PNISR-201ENST00000369239 EIF5BO60841 1220 aaKnown RBP6.42□□□□□ -1.38
PNISR-201ENST00000369239 ZBTB7CA1YPR0 619 aa6.42□□□□□ -1.38
PNISR-201ENST00000369239 PLCD3Q8N3E9 789 aa6.41□□□□□ -1.38
PNISR-201ENST00000369239 POLR3GLQ9BT43 218 aa6.4□□□□□ -1.39
PNISR-201ENST00000369239 IFNLR1Q8IU57 520 aaPredicted RBP6.38□□□□□ -1.39
PNISR-201ENST00000369239 NPM1P06748 294 aaKnown RBP eCLIP6.37□□□□□ -1.39
PNISR-201ENST00000369239 PKD2Q13563 968 aa6.36□□□□□ -1.39
PNISR-201ENST00000369239 CCDC9Q9Y3X0 531 aaKnown RBP6.36□□□□□ -1.39
PNISR-201ENST00000369239 ATXN8OSP0DMR3 200 aa6.35□□□□□ -1.39
PNISR-201ENST00000369239 SLC4A2P04920 1241 aa6.32□□□□□ -1.4
PNISR-201ENST00000369239 PDIA4P13667 645 aaKnown RBP6.32□□□□□ -1.4
PNISR-201ENST00000369239 CDK11BP21127 795 aaKnown RBP6.32□□□□□ -1.4
PNISR-201ENST00000369239 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.32□□□□□ -1.42e-8■■■□□ 15.1
PNISR-201ENST00000369239 CDK11AQ9UQ88 783 aaPredicted RBP6.32□□□□□ -1.4
PNISR-201ENST00000369239 RGL2O15211 777 aa6.31□□□□□ -1.4
PNISR-201ENST00000369239 AEBP1Q8IUX7 1158 aa6.3□□□□□ -1.4
PNISR-201ENST00000369239 ARID3CA6NKF2 412 aa6.3□□□□□ -1.4
PNISR-201ENST00000369239 WDR70Q9NW82 654 aa6.29□□□□□ -1.4
PNISR-201ENST00000369239 SPOCK2Q92563 424 aa6.29□□□□□ -1.4
PNISR-201ENST00000369239 MIER1Q8N108 512 aa6.27□□□□□ -1.41
PNISR-201ENST00000369239 RNF216Q9NWF9 866 aaPredicted RBP6.26□□□□□ -1.41
PNISR-201ENST00000369239 ATF5Q9Y2D1 282 aaPredicted RBP6.26□□□□□ -1.41
PNISR-201ENST00000369239 APBB1O00213 710 aa6.24□□□□□ -1.41
PNISR-201ENST00000369239 LMOD2Q6P5Q4 547 aa6.23□□□□□ -1.41
PNISR-201ENST00000369239 USP35Q9P2H5 1018 aa6.23□□□□□ -1.41
PNISR-201ENST00000369239 RBM25P49756 843 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms