RNA–Protein interactions for RNA: ENST00000368935.1

PRUNE1-203, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 1 (best) BASIC

Gene PRUNE1, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-203ENST00000368935 NISCHQ9Y2I1 1504 aa20.63■□□□□ 0.89
PRUNE1-203ENST00000368935 CCDC180Q9P1Z9 1646 aa17.61■□□□□ 0.41
PRUNE1-203ENST00000368935 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
PRUNE1-203ENST00000368935 ZCCHC6Q5VYS8 1495 aaKnown RBP17.49■□□□□ 0.39
PRUNE1-203ENST00000368935 SUPT5HO00267 1087 aaKnown RBP17.19■□□□□ 0.34
PRUNE1-203ENST00000368935 DCAF1Q9Y4B6 1507 aa16.96■□□□□ 0.31
PRUNE1-203ENST00000368935 DCAF8L2P0C7V8 631 aa16.92■□□□□ 0.3
PRUNE1-203ENST00000368935 MYO15BQ96JP2 1530 aa16.78■□□□□ 0.28
PRUNE1-203ENST00000368935 CHIC1Q5VXU3 224 aa16.77■□□□□ 0.27
PRUNE1-203ENST00000368935 ABCC9O60706 1549 aa16.55■□□□□ 0.24
PRUNE1-203ENST00000368935 SCRIBQ14160 1630 aa16.44■□□□□ 0.22
PRUNE1-203ENST00000368935 HRCP23327 699 aa16.35■□□□□ 0.21
PRUNE1-203ENST00000368935 RSF1Q96T23 1441 aaPredicted RBP16.31■□□□□ 0.2
PRUNE1-203ENST00000368935 PCGF6Q9BYE7 350 aa16.27■□□□□ 0.2
PRUNE1-203ENST00000368935 LOC105371045A0A1W2PR82 267 aa16.22■□□□□ 0.19
PRUNE1-203ENST00000368935 RB1CC1Q8TDY2 1594 aa16.22■□□□□ 0.19
PRUNE1-203ENST00000368935 NACADO15069 1562 aa16.21■□□□□ 0.19
PRUNE1-203ENST00000368935 CECR2Q9BXF3 1484 aa16.04■□□□□ 0.16
PRUNE1-203ENST00000368935 AEBP2Q6ZN18 517 aaPredicted RBP16.04■□□□□ 0.16
PRUNE1-203ENST00000368935 TRIM41Q8WV44 630 aa16.03■□□□□ 0.16
PRUNE1-203ENST00000368935 MROH2BQ7Z745 1585 aa16.02■□□□□ 0.16
PRUNE1-203ENST00000368935 TRIM26Q12899 539 aaPredicted RBP15.99■□□□□ 0.15
PRUNE1-203ENST00000368935 WIZO95785 1651 aa15.97■□□□□ 0.15
PRUNE1-203ENST00000368935 PPARGC1BQ86YN6 1023 aaKnown RBP15.96■□□□□ 0.15
PRUNE1-203ENST00000368935 BAZ1AQ9NRL2 1556 aaPredicted RBP15.92■□□□□ 0.14
PRUNE1-203ENST00000368935 FAM9AQ8IZU1 332 aaPredicted RBP15.86■□□□□ 0.13
PRUNE1-203ENST00000368935 EIF4G1Q04637 1599 aaKnown RBP15.84■□□□□ 0.13
PRUNE1-203ENST00000368935 UNC13AQ9UPW8 1703 aa15.76■□□□□ 0.11
PRUNE1-203ENST00000368935 TOP2AP11388 1531 aaKnown RBP15.74■□□□□ 0.11
PRUNE1-203ENST00000368935 SMARCA4P51532 1647 aa15.74■□□□□ 0.11
PRUNE1-203ENST00000368935 EHMT2Q96KQ7 1210 aa15.7■□□□□ 0.1
PRUNE1-203ENST00000368935 ZEB1P37275 1124 aaPredicted RBP15.68■□□□□ 0.1
PRUNE1-203ENST00000368935 SMARCA2P51531 1590 aa15.65■□□□□ 0.1
PRUNE1-203ENST00000368935 ABCC8Q09428 1581 aa15.61■□□□□ 0.09
PRUNE1-203ENST00000368935 CCDC88BA6NC98 1476 aa15.61■□□□□ 0.09
PRUNE1-203ENST00000368935 BICRAQ9NZM4 1560 aa15.49■□□□□ 0.07
PRUNE1-203ENST00000368935 PEG3Q9GZU2 1588 aa15.44■□□□□ 0.06
PRUNE1-203ENST00000368935 WRNQ14191 1432 aaPredicted RBP eCLIP15.44■□□□□ 0.06
PRUNE1-203ENST00000368935 SOGA1O94964 1423 aa15.43■□□□□ 0.06
PRUNE1-203ENST00000368935 EEA1Q15075 1411 aa15.42■□□□□ 0.06
PRUNE1-203ENST00000368935 CEP162Q5TB80 1403 aa15.42■□□□□ 0.06
PRUNE1-203ENST00000368935 TNIKQ9UKE5 1360 aa15.38■□□□□ 0.05
PRUNE1-203ENST00000368935 PABPN1Q86U42 306 aaKnown RBP eCLIP15.37■□□□□ 0.05
PRUNE1-203ENST00000368935 RUSC2Q8N2Y8 1516 aa15.35■□□□□ 0.05
PRUNE1-203ENST00000368935 GOLGA3Q08378 1498 aa15.32■□□□□ 0.04
PRUNE1-203ENST00000368935 CSRNP3Q8WYN3 585 aa15.32■□□□□ 0.04
PRUNE1-203ENST00000368935 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.31■□□□□ 0.04
PRUNE1-203ENST00000368935 SYNJ1O43426 1573 aa15.3■□□□□ 0.04
PRUNE1-203ENST00000368935 CCER1Q8TC90 406 aaPredicted RBP15.29■□□□□ 0.04
PRUNE1-203ENST00000368935 ATAD2BQ9ULI0 1458 aa15.27■□□□□ 0.03
PRUNE1-203ENST00000368935 KIF21BO75037 1637 aa15.26■□□□□ 0.03
PRUNE1-203ENST00000368935 UBTFP17480 764 aaKnown RBP15.25■□□□□ 0.03
PRUNE1-203ENST00000368935 BAZ1BQ9UIG0 1483 aaKnown RBP15.25■□□□□ 0.03
PRUNE1-203ENST00000368935 TTBK1Q5TCY1 1321 aaPredicted RBP15.24■□□□□ 0.03
PRUNE1-203ENST00000368935 CEP164Q9UPV0 1460 aa15.23■□□□□ 0.03
PRUNE1-203ENST00000368935 CLIP1P30622 1438 aa15.12■□□□□ 0.01
PRUNE1-203ENST00000368935 TOP2BQ02880 1626 aa15.12■□□□□ 0.01
PRUNE1-203ENST00000368935 BIVM-ERCC5R4GMW8 1640 aa15.09■□□□□ 0.01
PRUNE1-203ENST00000368935 SCAF1Q9H7N4 1312 aaKnown RBP15.09■□□□□ 0.01
PRUNE1-203ENST00000368935 RAPGEF2Q9Y4G8 1499 aa15.08■□□□□ 0.01
PRUNE1-203ENST00000368935 VPS8Q8N3P4 1428 aa15.08■□□□□ 0
PRUNE1-203ENST00000368935 HMGXB3Q12766 1538 aa15.02■□□□□ -0
PRUNE1-203ENST00000368935 DIEXFQ68CQ4 756 aaKnown RBP15.02□□□□□ -0.01
PRUNE1-203ENST00000368935 ERICH3Q5RHP9 1530 aa14.99□□□□□ -0.01
PRUNE1-203ENST00000368935 NCAPD3P42695 1498 aa14.95□□□□□ -0.02
PRUNE1-203ENST00000368935 PRXQ9BXM0 1461 aa14.94□□□□□ -0.02
PRUNE1-203ENST00000368935 APLP2Q06481 763 aa14.94□□□□□ -0.02
PRUNE1-203ENST00000368935 ACIN1Q9UKV3 1341 aaKnown RBP14.94□□□□□ -0.02
PRUNE1-203ENST00000368935 HNRNPUL2Q1KMD3 747 aaKnown RBP14.93□□□□□ -0.02
PRUNE1-203ENST00000368935 CUX1P39880 1505 aa14.93□□□□□ -0.02
PRUNE1-203ENST00000368935 ZNF316A6NFI3 1004 aaPredicted RBP14.9□□□□□ -0.02
PRUNE1-203ENST00000368935 NEUROD1Q13562 356 aa14.9□□□□□ -0.02
PRUNE1-203ENST00000368935 RANGAP1P46060 587 aaPredicted RBP14.89□□□□□ -0.03
PRUNE1-203ENST00000368935 ARAP1Q96P48 1450 aa14.89□□□□□ -0.03
PRUNE1-203ENST00000368935 PRDM2Q13029 1718 aa14.88□□□□□ -0.03
PRUNE1-203ENST00000368935 CENPBP07199 599 aaPredicted RBP14.86□□□□□ -0.03
PRUNE1-203ENST00000368935 CFTRP13569 1480 aa14.86□□□□□ -0.03
PRUNE1-203ENST00000368935 PELP1Q8IZL8 1130 aaKnown RBP14.86□□□□□ -0.03
PRUNE1-203ENST00000368935 KIF27Q86VH2 1401 aa14.85□□□□□ -0.03
PRUNE1-203ENST00000368935 GTF3C3Q9Y5Q9 886 aa14.75□□□□□ -0.05
PRUNE1-203ENST00000368935 ARHGAP35Q9NRY4 1499 aa14.75□□□□□ -0.05
PRUNE1-203ENST00000368935 RRBP1Q9P2E9 1410 aaKnown RBP14.74□□□□□ -0.05
PRUNE1-203ENST00000368935 KANK4Q5T7N3 995 aaPredicted RBP14.73□□□□□ -0.05
PRUNE1-203ENST00000368935 CLSPNQ9HAW4 1339 aa14.72□□□□□ -0.05
PRUNE1-203ENST00000368935 DHX57Q6P158 1386 aaKnown RBP14.72□□□□□ -0.05
PRUNE1-203ENST00000368935 CUX2O14529 1486 aa14.7□□□□□ -0.06
PRUNE1-203ENST00000368935 MIER1Q8N108 512 aa14.68□□□□□ -0.06
PRUNE1-203ENST00000368935 YTHDC1Q96MU7 727 aaKnown RBP14.65□□□□□ -0.06
PRUNE1-203ENST00000368935 FGD5Q6ZNL6 1462 aa14.65□□□□□ -0.06
PRUNE1-203ENST00000368935 CADPSQ9ULU8 1353 aa14.65□□□□□ -0.06
PRUNE1-203ENST00000368935 IGF1RP08069 1367 aa14.64□□□□□ -0.07
PRUNE1-203ENST00000368935 CCNB3Q8WWL7 1395 aa14.64□□□□□ -0.07
PRUNE1-203ENST00000368935 TIAM1Q13009 1591 aa14.64□□□□□ -0.07
PRUNE1-203ENST00000368935 MAP3K1Q13233 1512 aa14.61□□□□□ -0.07
PRUNE1-203ENST00000368935 CARMIL1Q5VZK9 1371 aa14.59□□□□□ -0.07
PRUNE1-203ENST00000368935 CFAP43Q8NDM7 1665 aa14.58□□□□□ -0.08
PRUNE1-203ENST00000368935 CC2D2AQ9P2K1 1620 aa14.58□□□□□ -0.08
PRUNE1-203ENST00000368935 FANCD2Q9BXW9 1451 aa14.54□□□□□ -0.08
PRUNE1-203ENST00000368935 PCF11O94913 1555 aaKnown RBP14.54□□□□□ -0.08
PRUNE1-203ENST00000368935 LRRC9Q6ZRR7 1453 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms