RNA–Protein interactions for RNA: ENST00000367589.3

XPR1-201, Transcript of xenotropic and polytropic retrovirus receptor 1, humanhuman

TSL 1 (best) BASIC

Gene XPR1, Length 4,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPR1-201ENST00000367589 NISCHQ9Y2I1 1504 aa25.56■■□□□ 1.68
XPR1-201ENST00000367589 DCAF8L2P0C7V8 631 aa24.4■■□□□ 1.5
XPR1-201ENST00000367589 SUPT5HO00267 1087 aaKnown RBP24.35■■□□□ 1.49
XPR1-201ENST00000367589 SHROOM4Q9ULL8 1493 aa24.25■■□□□ 1.47
XPR1-201ENST00000367589 PCGF6Q9BYE7 350 aa23.35■■□□□ 1.33
XPR1-201ENST00000367589 EHMT2Q96KQ7 1210 aa23.27■■□□□ 1.32
XPR1-201ENST00000367589 FAM9AQ8IZU1 332 aaPredicted RBP22.83■■□□□ 1.25
XPR1-201ENST00000367589 HRCP23327 699 aa22.73■■□□□ 1.23
XPR1-201ENST00000367589 PPARGC1BQ86YN6 1023 aaKnown RBP22.72■■□□□ 1.23
XPR1-201ENST00000367589 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
XPR1-201ENST00000367589 LOC105371045A0A1W2PR82 267 aa22.6■■□□□ 1.21
XPR1-201ENST00000367589 TTBK1Q5TCY1 1321 aaPredicted RBP22.51■■□□□ 1.19
XPR1-201ENST00000367589 TRIM41Q8WV44 630 aa22.3■■□□□ 1.16
XPR1-201ENST00000367589 TRIM26Q12899 539 aaPredicted RBP22.18■■□□□ 1.14
XPR1-201ENST00000367589 CCER1Q8TC90 406 aaPredicted RBP22.07■■□□□ 1.12
XPR1-201ENST00000367589 ZEB1P37275 1124 aaPredicted RBP22.05■■□□□ 1.12
XPR1-201ENST00000367589 RANGAP1P46060 587 aaPredicted RBP21.86■■□□□ 1.09
XPR1-201ENST00000367589 YTHDC1Q96MU7 727 aaKnown RBP21.82■■□□□ 1.08
XPR1-201ENST00000367589 MYO15BQ96JP2 1530 aa21.8■■□□□ 1.08
XPR1-201ENST00000367589 CENPBP07199 599 aaPredicted RBP21.74■■□□□ 1.07
XPR1-201ENST00000367589 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.74■■□□□ 1.07
XPR1-201ENST00000367589 PELP1Q8IZL8 1130 aaKnown RBP21.71■■□□□ 1.07
XPR1-201ENST00000367589 UBTFP17480 764 aaKnown RBP21.65■■□□□ 1.06
XPR1-201ENST00000367589 APLP2Q06481 763 aa21.63■■□□□ 1.05
XPR1-201ENST00000367589 ZCCHC6Q5VYS8 1495 aaKnown RBP21.39■■□□□ 1.02
XPR1-201ENST00000367589 DIEXFQ68CQ4 756 aaKnown RBP21.39■■□□□ 1.02
XPR1-201ENST00000367589 HNRNPUL2Q1KMD3 747 aaKnown RBP21.38■■□□□ 1.01
XPR1-201ENST00000367589 GTF3C3Q9Y5Q9 886 aa21.31■■□□□ 1
XPR1-201ENST00000367589 DCAF1Q9Y4B6 1507 aa21.27■■□□□ 1
XPR1-201ENST00000367589 SCAF1Q9H7N4 1312 aaKnown RBP21.23■□□□□ 0.99
XPR1-201ENST00000367589 ACIN1Q9UKV3 1341 aaKnown RBP21.12■□□□□ 0.97
XPR1-201ENST00000367589 ITGAEP38570 1179 aa21.1■□□□□ 0.97
XPR1-201ENST00000367589 NEUROD1Q13562 356 aa21.08■□□□□ 0.96
XPR1-201ENST00000367589 ATP1B4Q9UN42 357 aaPredicted RBP21.07■□□□□ 0.96
XPR1-201ENST00000367589 ABCC9O60706 1549 aa20.92■□□□□ 0.94
XPR1-201ENST00000367589 ZNF316A6NFI3 1004 aaPredicted RBP20.88■□□□□ 0.93
XPR1-201ENST00000367589 MYT1Q01538 1121 aa20.83■□□□□ 0.93
XPR1-201ENST00000367589 SCRIBQ14160 1630 aa20.81■□□□□ 0.92
XPR1-201ENST00000367589 PABPN1Q86U42 306 aaKnown RBP eCLIP20.78■□□□□ 0.92
XPR1-201ENST00000367589 BCANQ96GW7 911 aa20.72■□□□□ 0.91
XPR1-201ENST00000367589 RSF1Q96T23 1441 aaPredicted RBP20.72■□□□□ 0.91
XPR1-201ENST00000367589 NEFLP07196 543 aa20.71■□□□□ 0.91
XPR1-201ENST00000367589 CSRNP3Q8WYN3 585 aa20.7■□□□□ 0.9
XPR1-201ENST00000367589 CCDC180Q9P1Z9 1646 aa20.66■□□□□ 0.9
XPR1-201ENST00000367589 ERICH6Q7L0X2 663 aa20.63■□□□□ 0.89
XPR1-201ENST00000367589 MIER1Q8N108 512 aa20.63■□□□□ 0.89
XPR1-201ENST00000367589 CNGB1Q14028 1251 aaPredicted RBP20.55■□□□□ 0.88
XPR1-201ENST00000367589 FAM50AQ14320 339 aaKnown RBP20.44■□□□□ 0.86
XPR1-201ENST00000367589 CECR2Q9BXF3 1484 aa20.36■□□□□ 0.85
XPR1-201ENST00000367589 RB1CC1Q8TDY2 1594 aa20.34■□□□□ 0.85
XPR1-201ENST00000367589 CEP162Q5TB80 1403 aa20.33■□□□□ 0.85
XPR1-201ENST00000367589 POLR3GLQ9BT43 218 aa20.33■□□□□ 0.84
XPR1-201ENST00000367589 P3H3Q8IVL6 736 aa20.28■□□□□ 0.84
XPR1-201ENST00000367589 HIRIP3Q9BW71 556 aaPredicted RBP20.23■□□□□ 0.83
XPR1-201ENST00000367589 DDX10Q13206 875 aaKnown RBP20.22■□□□□ 0.83
XPR1-201ENST00000367589 FKBP8Q14318 412 aa20.22■□□□□ 0.83
XPR1-201ENST00000367589 SOGA1O94964 1423 aa20.17■□□□□ 0.82
XPR1-201ENST00000367589 TRIM52Q96A61 297 aa20.15■□□□□ 0.82
XPR1-201ENST00000367589 ANP32CO43423 234 aa20.13■□□□□ 0.81
XPR1-201ENST00000367589 CLIP1P30622 1438 aa20.12■□□□□ 0.81
XPR1-201ENST00000367589 MROH2BQ7Z745 1585 aa20.08■□□□□ 0.8
XPR1-201ENST00000367589 TNIKQ9UKE5 1360 aa20.06■□□□□ 0.8
XPR1-201ENST00000367589 ABCC8Q09428 1581 aa20.03■□□□□ 0.8
XPR1-201ENST00000367589 CCDC88BA6NC98 1476 aa20.03■□□□□ 0.8
XPR1-201ENST00000367589 ARID3CA6NKF2 412 aa19.98■□□□□ 0.79
XPR1-201ENST00000367589 IRX6P78412 446 aaPredicted RBP19.98■□□□□ 0.79
XPR1-201ENST00000367589 SUPT16HQ9Y5B9 1047 aaKnown RBP19.96■□□□□ 0.79
XPR1-201ENST00000367589 GOLGA3Q08378 1498 aa19.96■□□□□ 0.79
XPR1-201ENST00000367589 WRNQ14191 1432 aaPredicted RBP eCLIP19.91■□□□□ 0.78
XPR1-201ENST00000367589 CDK11AQ9UQ88 783 aaPredicted RBP19.91■□□□□ 0.78
XPR1-201ENST00000367589 HNRNPUQ00839 825 aaKnown RBP eCLIP19.91■□□□□ 0.78
XPR1-201ENST00000367589 ZNF326Q5BKZ1 582 aaKnown RBP19.9■□□□□ 0.78
XPR1-201ENST00000367589 SIN3AQ96ST3 1273 aa19.87■□□□□ 0.77
XPR1-201ENST00000367589 WIZO95785 1651 aa19.86■□□□□ 0.77
XPR1-201ENST00000367589 RUSC2Q8N2Y8 1516 aa19.84■□□□□ 0.77
XPR1-201ENST00000367589 EEA1Q15075 1411 aa19.82■□□□□ 0.76
XPR1-201ENST00000367589 KANK4Q5T7N3 995 aaPredicted RBP19.82■□□□□ 0.76
XPR1-201ENST00000367589 CLSPNQ9HAW4 1339 aa19.81■□□□□ 0.76
XPR1-201ENST00000367589 SENP3-EIF4A1A0A087X0R7 540 aa19.79■□□□□ 0.76
XPR1-201ENST00000367589 KCNH8Q96L42 1107 aa19.79■□□□□ 0.76
XPR1-201ENST00000367589 FAM9BQ8IZU0 186 aa19.79■□□□□ 0.76
XPR1-201ENST00000367589 TONSLQ96HA7 1378 aa19.77■□□□□ 0.76
XPR1-201ENST00000367589 CHIC2Q9UKJ5 165 aa19.76■□□□□ 0.75
XPR1-201ENST00000367589 CEP164Q9UPV0 1460 aa19.74■□□□□ 0.75
XPR1-201ENST00000367589 ANP32EQ9BTT0 268 aa19.73■□□□□ 0.75
XPR1-201ENST00000367589 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
XPR1-201ENST00000367589 NACADO15069 1562 aa19.69■□□□□ 0.74
XPR1-201ENST00000367589 RTL5Q5HYW3 569 aaPredicted RBP19.68■□□□□ 0.74
XPR1-201ENST00000367589 TSHZ2Q9NRE2 1034 aa19.66■□□□□ 0.74
XPR1-201ENST00000367589 VPS8Q8N3P4 1428 aa19.65■□□□□ 0.74
XPR1-201ENST00000367589 SALL2Q9Y467 1007 aaPredicted RBP19.61■□□□□ 0.73
XPR1-201ENST00000367589 NBR1Q14596 966 aa19.61■□□□□ 0.73
XPR1-201ENST00000367589 NPM2Q86SE8 214 aaKnown RBP19.6■□□□□ 0.73
XPR1-201ENST00000367589 DAXXQ9UER7 740 aaPredicted RBP19.59■□□□□ 0.73
XPR1-201ENST00000367589 RRP7BPQ9NSQ0 103 aa19.58■□□□□ 0.73
XPR1-201ENST00000367589 CCNB3Q8WWL7 1395 aa19.56■□□□□ 0.72
XPR1-201ENST00000367589 MRS2Q9HD23 443 aa19.56■□□□□ 0.72
XPR1-201ENST00000367589 ZNF777Q9ULD5 760 aaPredicted RBP19.52■□□□□ 0.72
XPR1-201ENST00000367589 RBM19Q9Y4C8 960 aaKnown RBP19.52■□□□□ 0.71
XPR1-201ENST00000367589 RAPGEF2Q9Y4G8 1499 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms