RNA–Protein interactions for RNA: ENST00000367526.8

UTRN-203, Transcript of utrophin, humanhuman

TSL 5 BASIC

Gene UTRN, Length 3,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTRN-203ENST00000367526 NISCHQ9Y2I1 1504 aa19.72■□□□□ 0.75
UTRN-203ENST00000367526 CCDC180Q9P1Z9 1646 aa16.96■□□□□ 0.31
UTRN-203ENST00000367526 ZCCHC6Q5VYS8 1495 aaKnown RBP16.64■□□□□ 0.25
UTRN-203ENST00000367526 SHROOM4Q9ULL8 1493 aa16.45■□□□□ 0.22
UTRN-203ENST00000367526 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
UTRN-203ENST00000367526 DCAF1Q9Y4B6 1507 aa16.31■□□□□ 0.2
UTRN-203ENST00000367526 SUPT5HO00267 1087 aaKnown RBP16.09■□□□□ 0.17
UTRN-203ENST00000367526 MYO15BQ96JP2 1530 aa15.97■□□□□ 0.15
UTRN-203ENST00000367526 ABCC9O60706 1549 aa15.79■□□□□ 0.12
UTRN-203ENST00000367526 NACADO15069 1562 aa15.78■□□□□ 0.12
UTRN-203ENST00000367526 SCRIBQ14160 1630 aa15.7■□□□□ 0.1
UTRN-203ENST00000367526 RB1CC1Q8TDY2 1594 aa15.56■□□□□ 0.08
UTRN-203ENST00000367526 CHIC1Q5VXU3 224 aa15.54■□□□□ 0.08
UTRN-203ENST00000367526 RSF1Q96T23 1441 aaPredicted RBP15.47■□□□□ 0.07
UTRN-203ENST00000367526 CECR2Q9BXF3 1484 aa15.27■□□□□ 0.04
UTRN-203ENST00000367526 BAZ1AQ9NRL2 1556 aaPredicted RBP15.24■□□□□ 0.03
UTRN-203ENST00000367526 MROH2BQ7Z745 1585 aa15.23■□□□□ 0.03
UTRN-203ENST00000367526 TRIM41Q8WV44 630 aa15.12■□□□□ 0.01
UTRN-203ENST00000367526 WIZO95785 1651 aa15.09■□□□□ 0.01
UTRN-203ENST00000367526 SMARCA4P51532 1647 aa15.05■□□□□ -0
UTRN-203ENST00000367526 UNC13AQ9UPW8 1703 aa15.04■□□□□ -0
UTRN-203ENST00000367526 TOP2AP11388 1531 aaKnown RBP15.01□□□□□ -0.01
UTRN-203ENST00000367526 PABPN1Q86U42 306 aaKnown RBP eCLIP15□□□□□ -0.01
UTRN-203ENST00000367526 BICRAQ9NZM4 1560 aa14.96□□□□□ -0.01
UTRN-203ENST00000367526 LOC105371045A0A1W2PR82 267 aa14.94□□□□□ -0.02
UTRN-203ENST00000367526 CCDC88BA6NC98 1476 aa14.86□□□□□ -0.03
UTRN-203ENST00000367526 SMARCA2P51531 1590 aa14.84□□□□□ -0.03
UTRN-203ENST00000367526 FAM9AQ8IZU1 332 aaPredicted RBP14.84□□□□□ -0.03
UTRN-203ENST00000367526 PEG3Q9GZU2 1588 aa14.83□□□□□ -0.03
UTRN-203ENST00000367526 EIF4G1Q04637 1599 aaKnown RBP14.8□□□□□ -0.04
UTRN-203ENST00000367526 PCGF6Q9BYE7 350 aa14.76□□□□□ -0.05
UTRN-203ENST00000367526 ATAD2BQ9ULI0 1458 aa14.76□□□□□ -0.05
UTRN-203ENST00000367526 BAZ1BQ9UIG0 1483 aaKnown RBP14.74□□□□□ -0.05
UTRN-203ENST00000367526 TRIM26Q12899 539 aaPredicted RBP14.68□□□□□ -0.06
UTRN-203ENST00000367526 EEA1Q15075 1411 aa14.66□□□□□ -0.06
UTRN-203ENST00000367526 ABCC8Q09428 1581 aa14.65□□□□□ -0.06
UTRN-203ENST00000367526 HRCP23327 699 aa14.64□□□□□ -0.07
UTRN-203ENST00000367526 WRNQ14191 1432 aaPredicted RBP eCLIP14.61□□□□□ -0.07
UTRN-203ENST00000367526 EHMT2Q96KQ7 1210 aa14.61□□□□□ -0.07
UTRN-203ENST00000367526 NCAPD3P42695 1498 aa14.57□□□□□ -0.08
UTRN-203ENST00000367526 HMGXB3Q12766 1538 aa14.56□□□□□ -0.08
UTRN-203ENST00000367526 CSRNP3Q8WYN3 585 aa14.53□□□□□ -0.08
UTRN-203ENST00000367526 SOGA1O94964 1423 aa14.5□□□□□ -0.09
UTRN-203ENST00000367526 TNIKQ9UKE5 1360 aa14.47□□□□□ -0.09
UTRN-203ENST00000367526 UBTFP17480 764 aaKnown RBP14.45□□□□□ -0.1
UTRN-203ENST00000367526 GOLGA3Q08378 1498 aa14.45□□□□□ -0.1
UTRN-203ENST00000367526 SYNJ1O43426 1573 aa14.42□□□□□ -0.1
UTRN-203ENST00000367526 CEP164Q9UPV0 1460 aa14.41□□□□□ -0.1
UTRN-203ENST00000367526 CEP162Q5TB80 1403 aa14.41□□□□□ -0.1
UTRN-203ENST00000367526 ZEB1P37275 1124 aaPredicted RBP14.39□□□□□ -0.11
UTRN-203ENST00000367526 RUSC2Q8N2Y8 1516 aa14.37□□□□□ -0.11
UTRN-203ENST00000367526 TOP2BQ02880 1626 aa14.35□□□□□ -0.11
UTRN-203ENST00000367526 CFTRP13569 1480 aa14.35□□□□□ -0.11
UTRN-203ENST00000367526 KIF21BO75037 1637 aa14.32□□□□□ -0.12
UTRN-203ENST00000367526 BIVM-ERCC5R4GMW8 1640 aa14.29□□□□□ -0.12
UTRN-203ENST00000367526 DNAJC5BQ9UF47 199 aa14.28□□□□□ -0.12
UTRN-203ENST00000367526 CADPSQ9ULU8 1353 aa14.26□□□□□ -0.13
UTRN-203ENST00000367526 KIF27Q86VH2 1401 aa14.24□□□□□ -0.13
UTRN-203ENST00000367526 CLIP1P30622 1438 aa14.24□□□□□ -0.13
UTRN-203ENST00000367526 PPARGC1BQ86YN6 1023 aaKnown RBP14.24□□□□□ -0.13
UTRN-203ENST00000367526 CC2D2AQ9P2K1 1620 aa14.23□□□□□ -0.13
UTRN-203ENST00000367526 CUX1P39880 1505 aa14.22□□□□□ -0.13
UTRN-203ENST00000367526 APLP2Q06481 763 aa14.21□□□□□ -0.13
UTRN-203ENST00000367526 RAPGEF2Q9Y4G8 1499 aa14.19□□□□□ -0.14
UTRN-203ENST00000367526 ERICH3Q5RHP9 1530 aa14.19□□□□□ -0.14
UTRN-203ENST00000367526 PRXQ9BXM0 1461 aa14.16□□□□□ -0.14
UTRN-203ENST00000367526 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
UTRN-203ENST00000367526 VPS8Q8N3P4 1428 aa14.15□□□□□ -0.14
UTRN-203ENST00000367526 TTBK1Q5TCY1 1321 aaPredicted RBP14.11□□□□□ -0.15
UTRN-203ENST00000367526 FANCD2Q9BXW9 1451 aa14.09□□□□□ -0.15
UTRN-203ENST00000367526 CCER1Q8TC90 406 aaPredicted RBP14.09□□□□□ -0.15
UTRN-203ENST00000367526 CUX2O14529 1486 aa14.08□□□□□ -0.15
UTRN-203ENST00000367526 RANGAP1P46060 587 aaPredicted RBP14.07□□□□□ -0.16
UTRN-203ENST00000367526 FGD5Q6ZNL6 1462 aa14.05□□□□□ -0.16
UTRN-203ENST00000367526 IGF1RP08069 1367 aa14□□□□□ -0.17
UTRN-203ENST00000367526 DNMBPQ6XZF7 1577 aa14□□□□□ -0.17
UTRN-203ENST00000367526 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14□□□□□ -0.17
UTRN-203ENST00000367526 CARMIL1Q5VZK9 1371 aa14□□□□□ -0.17
UTRN-203ENST00000367526 LAMC3Q9Y6N6 1575 aa14□□□□□ -0.17
UTRN-203ENST00000367526 PDS5BQ9NTI5 1447 aa13.97□□□□□ -0.17
UTRN-203ENST00000367526 TOPBP1Q92547 1522 aa13.95□□□□□ -0.18
UTRN-203ENST00000367526 ARAP1Q96P48 1450 aa13.95□□□□□ -0.18
UTRN-203ENST00000367526 ABCA10Q8WWZ4 1543 aa13.93□□□□□ -0.18
UTRN-203ENST00000367526 NESP48681 1621 aa13.92□□□□□ -0.18
UTRN-203ENST00000367526 POLA1P09884 1462 aaPredicted RBP13.92□□□□□ -0.18
UTRN-203ENST00000367526 ARHGAP35Q9NRY4 1499 aa13.89□□□□□ -0.19
UTRN-203ENST00000367526 HNRNPUL2Q1KMD3 747 aaKnown RBP13.88□□□□□ -0.19
UTRN-203ENST00000367526 RAD54L2Q9Y4B4 1467 aa13.87□□□□□ -0.19
UTRN-203ENST00000367526 FHAD1B1AJZ9 1412 aa13.86□□□□□ -0.19
UTRN-203ENST00000367526 CUL7Q14999 1698 aa13.83□□□□□ -0.19
UTRN-203ENST00000367526 URB2Q14146 1524 aaKnown RBP13.83□□□□□ -0.2
UTRN-203ENST00000367526 MAP3K1Q13233 1512 aa13.8□□□□□ -0.2
UTRN-203ENST00000367526 EFCAB5A4FU69 1503 aa13.78□□□□□ -0.2
UTRN-203ENST00000367526 KANK4Q5T7N3 995 aaPredicted RBP13.78□□□□□ -0.2
UTRN-203ENST00000367526 GAPVD1Q14C86 1478 aa13.77□□□□□ -0.2
UTRN-203ENST00000367526 RRBP1Q9P2E9 1410 aaKnown RBP13.76□□□□□ -0.21
UTRN-203ENST00000367526 TDRD9Q8NDG6 1382 aaKnown RBP13.75□□□□□ -0.21
UTRN-203ENST00000367526 CCNB3Q8WWL7 1395 aa13.75□□□□□ -0.21
UTRN-203ENST00000367526 CLSPNQ9HAW4 1339 aa13.74□□□□□ -0.21
UTRN-203ENST00000367526 TIAM1Q13009 1591 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms