RNA–Protein interactions for RNA: ENST00000367203.8

SOX13-202, Transcript of SRY-box 13, humanhuman

TSL 1 (best)

Gene SOX13, Length 3,525 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX13-202ENST00000367203 NISCHQ9Y2I1 1504 aa32.58■■■□□ 2.81
SOX13-202ENST00000367203 DCAF8L2P0C7V8 631 aa29.66■■■□□ 2.34
SOX13-202ENST00000367203 SHROOM4Q9ULL8 1493 aa29.5■■■□□ 2.31
SOX13-202ENST00000367203 SUPT5HO00267 1087 aaKnown RBP29.11■■■□□ 2.25
SOX13-202ENST00000367203 EHMT2Q96KQ7 1210 aa27.54■■■□□ 2
SOX13-202ENST00000367203 ZCCHC6Q5VYS8 1495 aaKnown RBP27.3■■□□□ 1.96
SOX13-202ENST00000367203 CHIC1Q5VXU3 224 aa27.28■■□□□ 1.96
SOX13-202ENST00000367203 FAM9AQ8IZU1 332 aaPredicted RBP27.19■■□□□ 1.94
SOX13-202ENST00000367203 PCGF6Q9BYE7 350 aa27.1■■□□□ 1.93
SOX13-202ENST00000367203 LOC105371045A0A1W2PR82 267 aa27.05■■□□□ 1.92
SOX13-202ENST00000367203 CCDC180Q9P1Z9 1646 aa26.96■■□□□ 1.91
SOX13-202ENST00000367203 ABCC9O60706 1549 aa26.88■■□□□ 1.89
SOX13-202ENST00000367203 TRIM41Q8WV44 630 aa26.76■■□□□ 1.87
SOX13-202ENST00000367203 MYO15BQ96JP2 1530 aa26.61■■□□□ 1.85
SOX13-202ENST00000367203 TTBK1Q5TCY1 1321 aaPredicted RBP26.5■■□□□ 1.83
SOX13-202ENST00000367203 PPARGC1BQ86YN6 1023 aaKnown RBP26.49■■□□□ 1.83
SOX13-202ENST00000367203 SCRIBQ14160 1630 aa26.47■■□□□ 1.83
SOX13-202ENST00000367203 PABPN1Q86U42 306 aaKnown RBP eCLIP26.27■■□□□ 1.8
SOX13-202ENST00000367203 HRCP23327 699 aa26.25■■□□□ 1.79
SOX13-202ENST00000367203 RANGAP1P46060 587 aaPredicted RBP26.08■■□□□ 1.77
SOX13-202ENST00000367203 RSF1Q96T23 1441 aaPredicted RBP26.05■■□□□ 1.76
SOX13-202ENST00000367203 TRIM26Q12899 539 aaPredicted RBP26■■□□□ 1.75
SOX13-202ENST00000367203 DCAF1Q9Y4B6 1507 aa26■■□□□ 1.75
SOX13-202ENST00000367203 CECR2Q9BXF3 1484 aa25.89■■□□□ 1.74
SOX13-202ENST00000367203 UBTFP17480 764 aaKnown RBP25.85■■□□□ 1.73
SOX13-202ENST00000367203 RB1CC1Q8TDY2 1594 aa25.63■■□□□ 1.69
SOX13-202ENST00000367203 CCER1Q8TC90 406 aaPredicted RBP25.6■■□□□ 1.69
SOX13-202ENST00000367203 MROH2BQ7Z745 1585 aa25.55■■□□□ 1.68
SOX13-202ENST00000367203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.55■■□□□ 1.68
SOX13-202ENST00000367203 NACADO15069 1562 aa25.49■■□□□ 1.67
SOX13-202ENST00000367203 APLP2Q06481 763 aa25.38■■□□□ 1.65
SOX13-202ENST00000367203 ZEB1P37275 1124 aaPredicted RBP25.33■■□□□ 1.64
SOX13-202ENST00000367203 WIZO95785 1651 aa25.31■■□□□ 1.64
SOX13-202ENST00000367203 HNRNPUL2Q1KMD3 747 aaKnown RBP25.26■■□□□ 1.63
SOX13-202ENST00000367203 CSRNP3Q8WYN3 585 aa25.21■■□□□ 1.63
SOX13-202ENST00000367203 ATP1B4Q9UN42 357 aaPredicted RBP25.09■■□□□ 1.61
SOX13-202ENST00000367203 ABCC8Q09428 1581 aa25.09■■□□□ 1.61
SOX13-202ENST00000367203 BAZ1AQ9NRL2 1556 aaPredicted RBP25.07■■□□□ 1.6
SOX13-202ENST00000367203 SOGA1O94964 1423 aa25.01■■□□□ 1.59
SOX13-202ENST00000367203 CCDC88BA6NC98 1476 aa25.01■■□□□ 1.59
SOX13-202ENST00000367203 ITGAEP38570 1179 aa24.99■■□□□ 1.59
SOX13-202ENST00000367203 YTHDC1Q96MU7 727 aaKnown RBP24.86■■□□□ 1.57
SOX13-202ENST00000367203 CEP162Q5TB80 1403 aa24.8■■□□□ 1.56
SOX13-202ENST00000367203 RUSC2Q8N2Y8 1516 aa24.79■■□□□ 1.56
SOX13-202ENST00000367203 WRNQ14191 1432 aaPredicted RBP eCLIP24.76■■□□□ 1.55
SOX13-202ENST00000367203 SMARCA4P51532 1647 aa24.71■■□□□ 1.55
SOX13-202ENST00000367203 DIEXFQ68CQ4 756 aaKnown RBP24.68■■□□□ 1.54
SOX13-202ENST00000367203 TOP2AP11388 1531 aaKnown RBP24.68■■□□□ 1.54
SOX13-202ENST00000367203 BAZ1BQ9UIG0 1483 aaKnown RBP24.67■■□□□ 1.54
SOX13-202ENST00000367203 P3H3Q8IVL6 736 aa24.67■■□□□ 1.54
SOX13-202ENST00000367203 SMARCA2P51531 1590 aa24.55■■□□□ 1.52
SOX13-202ENST00000367203 TNIKQ9UKE5 1360 aa24.55■■□□□ 1.52
SOX13-202ENST00000367203 CLIP1P30622 1438 aa24.52■■□□□ 1.52
SOX13-202ENST00000367203 GOLGA3Q08378 1498 aa24.47■■□□□ 1.51
SOX13-202ENST00000367203 ATAD2BQ9ULI0 1458 aa24.45■■□□□ 1.5
SOX13-202ENST00000367203 CENPBP07199 599 aaPredicted RBP24.42■■□□□ 1.5
SOX13-202ENST00000367203 FAM50AQ14320 339 aaKnown RBP24.39■■□□□ 1.49
SOX13-202ENST00000367203 EEA1Q15075 1411 aa24.36■■□□□ 1.49
SOX13-202ENST00000367203 ZNF316A6NFI3 1004 aaPredicted RBP24.31■■□□□ 1.48
SOX13-202ENST00000367203 CEP164Q9UPV0 1460 aa24.3■■□□□ 1.48
SOX13-202ENST00000367203 ARID3CA6NKF2 412 aa24.29■■□□□ 1.48
SOX13-202ENST00000367203 BICRAQ9NZM4 1560 aa24.29■■□□□ 1.48
SOX13-202ENST00000367203 RAPGEF2Q9Y4G8 1499 aa24.27■■□□□ 1.48
SOX13-202ENST00000367203 UNC13AQ9UPW8 1703 aa24.25■■□□□ 1.47
SOX13-202ENST00000367203 NEUROD1Q13562 356 aa24.24■■□□□ 1.47
SOX13-202ENST00000367203 KANK4Q5T7N3 995 aaPredicted RBP24.24■■□□□ 1.47
SOX13-202ENST00000367203 SCAF1Q9H7N4 1312 aaKnown RBP24.23■■□□□ 1.47
SOX13-202ENST00000367203 GTF3C3Q9Y5Q9 886 aa24.19■■□□□ 1.46
SOX13-202ENST00000367203 SYNJ1O43426 1573 aa24.13■■□□□ 1.45
SOX13-202ENST00000367203 ACIN1Q9UKV3 1341 aaKnown RBP24.1■■□□□ 1.45
SOX13-202ENST00000367203 MIER1Q8N108 512 aa24.08■■□□□ 1.45
SOX13-202ENST00000367203 KIF27Q86VH2 1401 aa24.07■■□□□ 1.44
SOX13-202ENST00000367203 VPS8Q8N3P4 1428 aa24.05■■□□□ 1.44
SOX13-202ENST00000367203 CUX2O14529 1486 aa24.01■■□□□ 1.43
SOX13-202ENST00000367203 EIF4G1Q04637 1599 aaKnown RBP23.97■■□□□ 1.43
SOX13-202ENST00000367203 HIRIP3Q9BW71 556 aaPredicted RBP23.96■■□□□ 1.43
SOX13-202ENST00000367203 FBLN2P98095 1184 aa23.9■■□□□ 1.42
SOX13-202ENST00000367203 CNGB1Q14028 1251 aaPredicted RBP23.89■■□□□ 1.42
SOX13-202ENST00000367203 CARMIL1Q5VZK9 1371 aa23.88■■□□□ 1.41
SOX13-202ENST00000367203 DNAJC5BQ9UF47 199 aa23.81■■□□□ 1.4
SOX13-202ENST00000367203 CHIC2Q9UKJ5 165 aa23.81■■□□□ 1.4
SOX13-202ENST00000367203 CADPSQ9ULU8 1353 aa23.81■■□□□ 1.4
SOX13-202ENST00000367203 TRIM52Q96A61 297 aa23.8■■□□□ 1.4
SOX13-202ENST00000367203 SIN3AQ96ST3 1273 aa23.8■■□□□ 1.4
SOX13-202ENST00000367203 NCAPD3P42695 1498 aa23.79■■□□□ 1.4
SOX13-202ENST00000367203 TDRD9Q8NDG6 1382 aaKnown RBP23.76■■□□□ 1.39
SOX13-202ENST00000367203 KIF21BO75037 1637 aa23.75■■□□□ 1.39
SOX13-202ENST00000367203 DDX10Q13206 875 aaKnown RBP23.72■■□□□ 1.39
SOX13-202ENST00000367203 CCNB3Q8WWL7 1395 aa23.71■■□□□ 1.39
SOX13-202ENST00000367203 IGF1RP08069 1367 aa23.71■■□□□ 1.39
SOX13-202ENST00000367203 CUX1P39880 1505 aa23.7■■□□□ 1.38
SOX13-202ENST00000367203 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
SOX13-202ENST00000367203 POLR3GLQ9BT43 218 aa23.67■■□□□ 1.38
SOX13-202ENST00000367203 PEG3Q9GZU2 1588 aa23.66■■□□□ 1.38
SOX13-202ENST00000367203 RAD54L2Q9Y4B4 1467 aa23.65■■□□□ 1.38
SOX13-202ENST00000367203 RRP7BPQ9NSQ0 103 aa23.63■■□□□ 1.37
SOX13-202ENST00000367203 MTUS2Q5JR59 1369 aa23.63■■□□□ 1.37
SOX13-202ENST00000367203 CFTRP13569 1480 aa23.62■■□□□ 1.37
SOX13-202ENST00000367203 NESP48681 1621 aa23.61■■□□□ 1.37
SOX13-202ENST00000367203 TOP2BQ02880 1626 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms