RNA–Protein interactions for RNA: ENST00000366576.3

MTR-201, Transcript of 5-methyltetrahydrofolate-homocysteine methyltransferase, humanhuman

TSL 1 (best)

Gene MTR, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTR-201ENST00000366576 DCAF8L2P0C7V8 631 aa18.48■□□□□ 0.55
MTR-201ENST00000366576 SUPT5HO00267 1087 aaKnown RBP17.59■□□□□ 0.41
MTR-201ENST00000366576 NISCHQ9Y2I1 1504 aa17.2■□□□□ 0.34
MTR-201ENST00000366576 PELP1Q8IZL8 1130 aaKnown RBP17.13■□□□□ 0.33
MTR-201ENST00000366576 SHROOM4Q9ULL8 1493 aa17.08■□□□□ 0.33
MTR-201ENST00000366576 EHMT2Q96KQ7 1210 aa16.98■□□□□ 0.31
MTR-201ENST00000366576 APLP2Q06481 763 aa16.93■□□□□ 0.3
MTR-201ENST00000366576 FAM9AQ8IZU1 332 aaPredicted RBP16.66■□□□□ 0.26
MTR-201ENST00000366576 PCGF6Q9BYE7 350 aa16.52■□□□□ 0.24
MTR-201ENST00000366576 CENPBP07199 599 aaPredicted RBP16.44■□□□□ 0.22
MTR-201ENST00000366576 TTBK1Q5TCY1 1321 aaPredicted RBP16.44■□□□□ 0.22
MTR-201ENST00000366576 ZEB1P37275 1124 aaPredicted RBP16.42■□□□□ 0.22
MTR-201ENST00000366576 CCER1Q8TC90 406 aaPredicted RBP16.36■□□□□ 0.21
MTR-201ENST00000366576 ERICH6Q7L0X2 663 aa16.32■□□□□ 0.2
MTR-201ENST00000366576 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
MTR-201ENST00000366576 RANGAP1P46060 587 aaPredicted RBP16.26■□□□□ 0.19
MTR-201ENST00000366576 ATP1B4Q9UN42 357 aaPredicted RBP16.2■□□□□ 0.18
MTR-201ENST00000366576 UBTFP17480 764 aaKnown RBP16.17■□□□□ 0.18
MTR-201ENST00000366576 NEFLP07196 543 aa16.12■□□□□ 0.17
MTR-201ENST00000366576 MYT1Q01538 1121 aa15.93■□□□□ 0.14
MTR-201ENST00000366576 YTHDC1Q96MU7 727 aaKnown RBP15.91■□□□□ 0.14
MTR-201ENST00000366576 TRIM26Q12899 539 aaPredicted RBP15.83■□□□□ 0.12
MTR-201ENST00000366576 PPARGC1BQ86YN6 1023 aaKnown RBP15.78■□□□□ 0.12
MTR-201ENST00000366576 DAXXQ9UER7 740 aaPredicted RBP15.67■□□□□ 0.1
MTR-201ENST00000366576 HRCP23327 699 aa15.66■□□□□ 0.1
MTR-201ENST00000366576 ITGAEP38570 1179 aa15.64■□□□□ 0.09
MTR-201ENST00000366576 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.63■□□□□ 0.09
MTR-201ENST00000366576 HNRNPUL2Q1KMD3 747 aaKnown RBP15.63■□□□□ 0.09
MTR-201ENST00000366576 MYT1LQ9UL68 1186 aa15.61■□□□□ 0.09
MTR-201ENST00000366576 POLR3GLQ9BT43 218 aa15.6■□□□□ 0.09
MTR-201ENST00000366576 CHIC1Q5VXU3 224 aa15.51■□□□□ 0.07
MTR-201ENST00000366576 LOC105371045A0A1W2PR82 267 aa15.51■□□□□ 0.07
MTR-201ENST00000366576 CNGB1Q14028 1251 aaPredicted RBP15.4■□□□□ 0.06
MTR-201ENST00000366576 DIEXFQ68CQ4 756 aaKnown RBP15.32■□□□□ 0.04
MTR-201ENST00000366576 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
MTR-201ENST00000366576 CLSPNQ9HAW4 1339 aa15.31■□□□□ 0.04
MTR-201ENST00000366576 RTL5Q5HYW3 569 aaPredicted RBP15.3■□□□□ 0.04
MTR-201ENST00000366576 ZNF316A6NFI3 1004 aaPredicted RBP15.26■□□□□ 0.03
MTR-201ENST00000366576 FAM50AQ14320 339 aaKnown RBP15.23■□□□□ 0.03
MTR-201ENST00000366576 TRIM52Q96A61 297 aa15.19■□□□□ 0.02
MTR-201ENST00000366576 NEUROD1Q13562 356 aa15.11■□□□□ 0.01
MTR-201ENST00000366576 ANP32CO43423 234 aa15.09■□□□□ 0.01
MTR-201ENST00000366576 ZBTB47Q9UFB7 747 aaPredicted RBP15.04■□□□□ -0
MTR-201ENST00000366576 CDK11AQ9UQ88 783 aaPredicted RBP15.01□□□□□ -0.01
MTR-201ENST00000366576 ZNF326Q5BKZ1 582 aaKnown RBP15.01□□□□□ -0.01
MTR-201ENST00000366576 GTF3C3Q9Y5Q9 886 aa14.99□□□□□ -0.01
MTR-201ENST00000366576 BCANQ96GW7 911 aa14.99□□□□□ -0.01
MTR-201ENST00000366576 PABPN1Q86U42 306 aaKnown RBP eCLIP14.97□□□□□ -0.01
MTR-201ENST00000366576 NEFMP07197 916 aa14.9□□□□□ -0.02
MTR-201ENST00000366576 CANXP27824 592 aaKnown RBP14.89□□□□□ -0.03
MTR-201ENST00000366576 FBLN2P98095 1184 aa14.88□□□□□ -0.03
MTR-201ENST00000366576 ABCC9O60706 1549 aa14.86□□□□□ -0.03
MTR-201ENST00000366576 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
MTR-201ENST00000366576 SLC24A1O60721 1099 aa14.79□□□□□ -0.04
MTR-201ENST00000366576 ANP32AP39687 249 aaKnown RBP14.79□□□□□ -0.04
MTR-201ENST00000366576 ACIN1Q9UKV3 1341 aaKnown RBP14.77□□□□□ -0.04
MTR-201ENST00000366576 P3H3Q8IVL6 736 aa14.76□□□□□ -0.05
MTR-201ENST00000366576 BCL11AQ9H165 835 aa14.75□□□□□ -0.05
MTR-201ENST00000366576 ZNF777Q9ULD5 760 aaPredicted RBP14.71□□□□□ -0.06
MTR-201ENST00000366576 ARID3CA6NKF2 412 aa14.69□□□□□ -0.06
MTR-201ENST00000366576 TONSLQ96HA7 1378 aa14.66□□□□□ -0.06
MTR-201ENST00000366576 NPM2Q86SE8 214 aaKnown RBP14.62□□□□□ -0.07
MTR-201ENST00000366576 ESF1Q9H501 851 aaKnown RBP14.62□□□□□ -0.07
MTR-201ENST00000366576 ANP32BQ92688 251 aaKnown RBP14.61□□□□□ -0.07
MTR-201ENST00000366576 UPF2Q9HAU5 1272 aaKnown RBP14.6□□□□□ -0.07
MTR-201ENST00000366576 HNRNPUQ00839 825 aaKnown RBP eCLIP14.59□□□□□ -0.07
MTR-201ENST00000366576 FKBP8Q14318 412 aa14.59□□□□□ -0.07
MTR-201ENST00000366576 HSP90AA1P07900 732 aaKnown RBP14.59□□□□□ -0.07
MTR-201ENST00000366576 CHGAP10645 457 aaKnown RBP14.55□□□□□ -0.08
MTR-201ENST00000366576 DDX10Q13206 875 aaKnown RBP14.55□□□□□ -0.08
MTR-201ENST00000366576 STAG3Q9UJ98 1225 aa14.54□□□□□ -0.08
MTR-201ENST00000366576 FAM9BQ8IZU0 186 aa14.53□□□□□ -0.08
MTR-201ENST00000366576 TMC1Q8TDI8 760 aa14.51□□□□□ -0.09
MTR-201ENST00000366576 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.5□□□□□ -0.09
MTR-201ENST00000366576 NPM1P06748 294 aaKnown RBP eCLIP14.5□□□□□ -0.09
MTR-201ENST00000366576 CCDC136Q96JN2 1154 aa14.48□□□□□ -0.09
MTR-201ENST00000366576 EIF5BO60841 1220 aaKnown RBP14.45□□□□□ -0.1
MTR-201ENST00000366576 TSPY4P0CV99 314 aa14.45□□□□□ -0.1
MTR-201ENST00000366576 TSPY10P0CW01 314 aa14.45□□□□□ -0.1
MTR-201ENST00000366576 SALL2Q9Y467 1007 aaPredicted RBP14.45□□□□□ -0.1
MTR-201ENST00000366576 DCAF1Q9Y4B6 1507 aa14.42□□□□□ -0.1
MTR-201ENST00000366576 WDR43Q15061 677 aaKnown RBP eCLIP14.42□□□□□ -0.1
MTR-201ENST00000366576 CHIC2Q9UKJ5 165 aa14.42□□□□□ -0.1
MTR-201ENST00000366576 MRS2Q9HD23 443 aa14.41□□□□□ -0.1
MTR-201ENST00000366576 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.39□□□□□ -0.113e-6■■□□□ 11.7
MTR-201ENST00000366576 MTUS2Q5JR59 1369 aa14.36□□□□□ -0.11
MTR-201ENST00000366576 SCRIBQ14160 1630 aa14.34□□□□□ -0.11
MTR-201ENST00000366576 KDM2AQ9Y2K7 1162 aa14.34□□□□□ -0.11
MTR-201ENST00000366576 GLIPR1L2Q4G1C9 344 aa14.33□□□□□ -0.12
MTR-201ENST00000366576 EIF4G2P78344 907 aaKnown RBP eCLIP14.32□□□□□ -0.122e-6■□□□□ 9
MTR-201ENST00000366576 MYH16Q9H6N6 1097 aa14.3□□□□□ -0.12
MTR-201ENST00000366576 PLPPR3Q6T4P5 718 aa14.29□□□□□ -0.12
MTR-201ENST00000366576 NBR1Q14596 966 aa14.28□□□□□ -0.12
MTR-201ENST00000366576 MIER1Q8N108 512 aa14.26□□□□□ -0.13
MTR-201ENST00000366576 CLIP1P30622 1438 aa14.24□□□□□ -0.13
MTR-201ENST00000366576 CHMP7Q8WUX9 453 aaPredicted RBP14.24□□□□□ -0.13
MTR-201ENST00000366576 ANP32EQ9BTT0 268 aa14.21□□□□□ -0.13
MTR-201ENST00000366576 BECN1Q14457 450 aa14.21□□□□□ -0.13
MTR-201ENST00000366576 HIRIP3Q9BW71 556 aaPredicted RBP14.21□□□□□ -0.13
MTR-201ENST00000366576 ARXQ96QS3 562 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms