RNA–Protein interactions for RNA: ENST00000365367.1

RNU6-53P-201, Transcript of RNA, U6 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU6-53P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-53P-201ENST00000365367 AEBP2Q6ZN18 517 aaPredicted RBP7.63□□□□□ -1.19
RNU6-53P-201ENST00000365367 CHIC1Q5VXU3 224 aa7.17□□□□□ -1.26
RNU6-53P-201ENST00000365367 SENP3Q9H4L4 574 aaPredicted RBP6.41□□□□□ -1.38
RNU6-53P-201ENST00000365367 PHF23Q9BUL5 403 aaPredicted RBP6.31□□□□□ -1.4
RNU6-53P-201ENST00000365367 FOXD1Q16676 465 aa6.02□□□□□ -1.45
RNU6-53P-201ENST00000365367 PLPPR3Q6T4P5 718 aa5.65□□□□□ -1.5
RNU6-53P-201ENST00000365367 PPP6R1Q9UPN7 881 aa5.62□□□□□ -1.51
RNU6-53P-201ENST00000365367 MSH5O43196 834 aa5.59□□□□□ -1.51
RNU6-53P-201ENST00000365367 ADRA2BP18089 450 aa5.55□□□□□ -1.52
RNU6-53P-201ENST00000365367 PIAS4Q8N2W9 510 aaPredicted RBP5.55□□□□□ -1.52
RNU6-53P-201ENST00000365367 POTEDQ86YR6 584 aa5.54□□□□□ -1.52
RNU6-53P-201ENST00000365367 DMRT2Q9Y5R5 561 aa5.12□□□□□ -1.59
RNU6-53P-201ENST00000365367 MAPK8IP2Q13387 824 aaPredicted RBP5.11□□□□□ -1.59
RNU6-53P-201ENST00000365367 SCAF1Q9H7N4 1312 aaKnown RBP4.97□□□□□ -1.61
RNU6-53P-201ENST00000365367 PPP4R3CPQ6ZMV5 832 aa4.96□□□□□ -1.62
RNU6-53P-201ENST00000365367 HOXD11P31277 338 aaPredicted RBP4.95□□□□□ -1.62
RNU6-53P-201ENST00000365367 CNKSR2Q8WXI2 1034 aa4.87□□□□□ -1.63
RNU6-53P-201ENST00000365367 RNF216Q9NWF9 866 aaPredicted RBP4.86□□□□□ -1.63
RNU6-53P-201ENST00000365367 RNF39Q9H2S5 420 aa4.83□□□□□ -1.64
RNU6-53P-201ENST00000365367 DNAJC5BQ9UF47 199 aa4.8□□□□□ -1.64
RNU6-53P-201ENST00000365367 CACNB1Q02641 598 aaPredicted RBP4.74□□□□□ -1.65
RNU6-53P-201ENST00000365367 NPM3O75607 178 aaKnown RBP4.73□□□□□ -1.65
RNU6-53P-201ENST00000365367 DCAF8L1A6NGE4 600 aa4.72□□□□□ -1.65
RNU6-53P-201ENST00000365367 C1QBPQ07021 282 aaKnown RBP4.69□□□□□ -1.66
RNU6-53P-201ENST00000365367 NCBP3Q53F19 620 aaKnown RBP4.69□□□□□ -1.66
RNU6-53P-201ENST00000365367 KCNA4P22459 653 aa4.61□□□□□ -1.67
RNU6-53P-201ENST00000365367 U3KPZ7 1027 aaPredicted RBP4.6□□□□□ -1.67
RNU6-53P-201ENST00000365367 SLC4A2P04920 1241 aa4.57□□□□□ -1.68
RNU6-53P-201ENST00000365367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.55□□□□□ -1.68
RNU6-53P-201ENST00000365367 SPINK5Q9NQ38 1064 aaPredicted RBP4.51□□□□□ -1.69
RNU6-53P-201ENST00000365367 DSG3P32926 999 aa4.49□□□□□ -1.69
RNU6-53P-201ENST00000365367 CAPN15O75808 1086 aa4.39□□□□□ -1.71
RNU6-53P-201ENST00000365367 ZNF219Q9P2Y4 722 aaPredicted RBP4.37□□□□□ -1.71
RNU6-53P-201ENST00000365367 MYCNP04198 464 aaPredicted RBP4.35□□□□□ -1.71
RNU6-53P-201ENST00000365367 ABCB7O75027 752 aa4.34□□□□□ -1.71
RNU6-53P-201ENST00000365367 SAMD1Q6SPF0 538 aaPredicted RBP4.34□□□□□ -1.71
RNU6-53P-201ENST00000365367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.33□□□□□ -1.72
RNU6-53P-201ENST00000365367 HNRNPUL2Q1KMD3 747 aaKnown RBP4.33□□□□□ -1.72
RNU6-53P-201ENST00000365367 ZBTB22O15209 634 aa4.32□□□□□ -1.72
RNU6-53P-201ENST00000365367 TRHP20396 242 aaPredicted RBP4.32□□□□□ -1.72
RNU6-53P-201ENST00000365367 APLP2Q06481 763 aa4.32□□□□□ -1.72
RNU6-53P-201ENST00000365367 POTEHQ6S545 545 aa4.3□□□□□ -1.72
RNU6-53P-201ENST00000365367 ATF5Q9Y2D1 282 aaPredicted RBP4.3□□□□□ -1.72
RNU6-53P-201ENST00000365367 SLC4A1APQ9BWU0 796 aaKnown RBP4.29□□□□□ -1.72
RNU6-53P-201ENST00000365367 FOXD4L1Q9NU39 408 aa4.29□□□□□ -1.72
RNU6-53P-201ENST00000365367 POLA2Q14181 598 aa4.22□□□□□ -1.73
RNU6-53P-201ENST00000365367 RBM42Q9BTD8 480 aaKnown RBP4.22□□□□□ -1.73
RNU6-53P-201ENST00000365367 ATXN8OSP0DMR3 200 aa4.17□□□□□ -1.74
RNU6-53P-201ENST00000365367 CHRDL2Q6WN34 429 aa4.16□□□□□ -1.74
RNU6-53P-201ENST00000365367 OSCARQ8IYS5 282 aa4.15□□□□□ -1.75
RNU6-53P-201ENST00000365367 ZBTB12Q9Y330 459 aaPredicted RBP4.15□□□□□ -1.75
RNU6-53P-201ENST00000365367 AKT1S1Q96B36 256 aa4.14□□□□□ -1.75
RNU6-53P-201ENST00000365367 MKRN4PQ13434 485 aaPredicted RBP4.12□□□□□ -1.75
RNU6-53P-201ENST00000365367 REM2Q8IYK8 340 aaPredicted RBP4.1□□□□□ -1.75
RNU6-53P-201ENST00000365367 PITPNM1O00562 1244 aa4.09□□□□□ -1.75
RNU6-53P-201ENST00000365367 PIP4P2Q8N4L2 257 aa4.09□□□□□ -1.75
RNU6-53P-201ENST00000365367 FXR2P51116 673 aaKnown RBP eCLIP4.08□□□□□ -1.76
RNU6-53P-201ENST00000365367 SSUH2Q9Y2M2 353 aa4.08□□□□□ -1.76
RNU6-53P-201ENST00000365367 SPDYE2BA6NHP3 402 aa4.05□□□□□ -1.76
RNU6-53P-201ENST00000365367 SPDYE6P0CI01 402 aa4.05□□□□□ -1.76
RNU6-53P-201ENST00000365367 SPDYE2Q495Y8 402 aa4.05□□□□□ -1.76
RNU6-53P-201ENST00000365367 CSRNP3Q8WYN3 585 aa4.03□□□□□ -1.76
RNU6-53P-201ENST00000365367 SP7Q8TDD2 431 aaPredicted RBP4.02□□□□□ -1.77
RNU6-53P-201ENST00000365367 FBLN2P98095 1184 aa3.99□□□□□ -1.77
RNU6-53P-201ENST00000365367 EVX2Q03828 476 aa3.99□□□□□ -1.77
RNU6-53P-201ENST00000365367 C19orf67A6NJJ6 358 aa3.95□□□□□ -1.78
RNU6-53P-201ENST00000365367 SPDYE1Q8NFV5 336 aaPredicted RBP3.95□□□□□ -1.78
RNU6-53P-201ENST00000365367 PRKAR2AP13861 404 aaKnown RBP3.92□□□□□ -1.78
RNU6-53P-201ENST00000365367 ZNF692Q9BU19 519 aaPredicted RBP3.92□□□□□ -1.78
RNU6-53P-201ENST00000365367 PABPN1Q86U42 306 aaKnown RBP eCLIP3.9□□□□□ -1.79
RNU6-53P-201ENST00000365367 HAX1O00165 279 aa3.89□□□□□ -1.79
RNU6-53P-201ENST00000365367 CHADLQ6NUI6 762 aa3.89□□□□□ -1.79
RNU6-53P-201ENST00000365367 PROM2Q8N271 834 aa3.88□□□□□ -1.79
RNU6-53P-201ENST00000365367 CLEC11AQ9Y240 323 aa3.87□□□□□ -1.79
RNU6-53P-201ENST00000365367 EHMT2Q96KQ7 1210 aa3.86□□□□□ -1.79
RNU6-53P-201ENST00000365367 GABBR2O75899 941 aa3.85□□□□□ -1.79
RNU6-53P-201ENST00000365367 POTEIP0CG38 1075 aa3.85□□□□□ -1.79
RNU6-53P-201ENST00000365367 CREBZFQ9NS37 354 aa3.85□□□□□ -1.79
RNU6-53P-201ENST00000365367 MNX1P50219 401 aaPredicted RBP3.84□□□□□ -1.79
RNU6-53P-201ENST00000365367 FARP1Q9Y4F1 1045 aaPredicted RBP3.83□□□□□ -1.8
RNU6-53P-201ENST00000365367 PRR29P0C7W0 189 aa3.82□□□□□ -1.8
RNU6-53P-201ENST00000365367 ZNF579Q8NAF0 562 aaKnown RBP3.82□□□□□ -1.8
RNU6-53P-201ENST00000365367 SPDYE4A6NLX3 237 aa3.8□□□□□ -1.8
RNU6-53P-201ENST00000365367 CD44P16070 742 aaKnown RBP3.8□□□□□ -1.8
RNU6-53P-201ENST00000365367 STAG3Q9UJ98 1225 aa3.76□□□□□ -1.81
RNU6-53P-201ENST00000365367 CLCN6P51797 869 aa3.75□□□□□ -1.81
RNU6-53P-201ENST00000365367 GALR2O43603 387 aaPredicted RBP3.74□□□□□ -1.81
RNU6-53P-201ENST00000365367 LHX8Q68G74 356 aa3.73□□□□□ -1.81
RNU6-53P-201ENST00000365367 PHF12Q96QT6 1004 aa3.72□□□□□ -1.81
RNU6-53P-201ENST00000365367 NISCHQ9Y2I1 1504 aa3.71□□□□□ -1.82
RNU6-53P-201ENST00000365367 ZRANB1Q9UGI0 708 aa3.71□□□□□ -1.82
RNU6-53P-201ENST00000365367 POTEB2H3BUK9 544 aa3.7□□□□□ -1.82
RNU6-53P-201ENST00000365367 PELP1Q8IZL8 1130 aaKnown RBP3.7□□□□□ -1.82
RNU6-53P-201ENST00000365367 CCDC61Q9Y6R9 512 aa3.7□□□□□ -1.82
RNU6-53P-201ENST00000365367 ASTLQ6HA08 431 aaPredicted RBP3.69□□□□□ -1.82
RNU6-53P-201ENST00000365367 MS4A3Q96HJ5 214 aa3.69□□□□□ -1.82
RNU6-53P-201ENST00000365367 POTEJP0CG39 1038 aa3.68□□□□□ -1.82
RNU6-53P-201ENST00000365367 OTUD5Q96G74 571 aa3.67□□□□□ -1.82
RNU6-53P-201ENST00000365367 POTEFA5A3E0 1075 aa3.66□□□□□ -1.82
RNU6-53P-201ENST00000365367 RASEFQ8IZ41 740 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms