RNA–Protein interactions for RNA: ENST00000365212.2

RNU6-290P-201, Transcript of RNA, U6 small nuclear 290, pseudogene, humanhuman

BASIC

Gene RNU6-290P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-290P-201ENST00000365212 AEBP2Q6ZN18 517 aaPredicted RBP16.29■□□□□ 0.2
RNU6-290P-201ENST00000365212 CHIC1Q5VXU3 224 aa15.45■□□□□ 0.06
RNU6-290P-201ENST00000365212 SENP3Q9H4L4 574 aaPredicted RBP13.86□□□□□ -0.19
RNU6-290P-201ENST00000365212 PHF23Q9BUL5 403 aaPredicted RBP13.68□□□□□ -0.22
RNU6-290P-201ENST00000365212 FOXD1Q16676 465 aa12.93□□□□□ -0.34
RNU6-290P-201ENST00000365212 PLPPR3Q6T4P5 718 aa12.33□□□□□ -0.44
RNU6-290P-201ENST00000365212 PPP6R1Q9UPN7 881 aa12.1□□□□□ -0.47
RNU6-290P-201ENST00000365212 PIAS4Q8N2W9 510 aaPredicted RBP12.09□□□□□ -0.47
RNU6-290P-201ENST00000365212 MSH5O43196 834 aa12.08□□□□□ -0.48
RNU6-290P-201ENST00000365212 ADRA2BP18089 450 aa12.06□□□□□ -0.48
RNU6-290P-201ENST00000365212 POTEDQ86YR6 584 aa11.81□□□□□ -0.52
RNU6-290P-201ENST00000365212 MAPK8IP2Q13387 824 aaPredicted RBP11.07□□□□□ -0.64
RNU6-290P-201ENST00000365212 DMRT2Q9Y5R5 561 aa11□□□□□ -0.65
RNU6-290P-201ENST00000365212 SCAF1Q9H7N4 1312 aaKnown RBP10.97□□□□□ -0.65
RNU6-290P-201ENST00000365212 PPP4R3CPQ6ZMV5 832 aa10.82□□□□□ -0.68
RNU6-290P-201ENST00000365212 HOXD11P31277 338 aaPredicted RBP10.6□□□□□ -0.71
RNU6-290P-201ENST00000365212 CNKSR2Q8WXI2 1034 aa10.6□□□□□ -0.71
RNU6-290P-201ENST00000365212 DCAF8L1A6NGE4 600 aa10.54□□□□□ -0.72
RNU6-290P-201ENST00000365212 RNF216Q9NWF9 866 aaPredicted RBP10.51□□□□□ -0.73
RNU6-290P-201ENST00000365212 NCBP3Q53F19 620 aaKnown RBP10.37□□□□□ -0.75
RNU6-290P-201ENST00000365212 CACNB1Q02641 598 aaPredicted RBP10.36□□□□□ -0.75
RNU6-290P-201ENST00000365212 RNF39Q9H2S5 420 aa10.32□□□□□ -0.76
RNU6-290P-201ENST00000365212 NPM3O75607 178 aaKnown RBP10.27□□□□□ -0.77
RNU6-290P-201ENST00000365212 DNAJC5BQ9UF47 199 aa10.2□□□□□ -0.78
RNU6-290P-201ENST00000365212 C1QBPQ07021 282 aaKnown RBP10.15□□□□□ -0.78
RNU6-290P-201ENST00000365212 KCNA4P22459 653 aa10.08□□□□□ -0.8
RNU6-290P-201ENST00000365212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.08□□□□□ -0.8
RNU6-290P-201ENST00000365212 U3KPZ7 1027 aaPredicted RBP9.91□□□□□ -0.82
RNU6-290P-201ENST00000365212 SLC4A2P04920 1241 aa9.81□□□□□ -0.84
RNU6-290P-201ENST00000365212 SPINK5Q9NQ38 1064 aaPredicted RBP9.76□□□□□ -0.85
RNU6-290P-201ENST00000365212 CAPN15O75808 1086 aa9.72□□□□□ -0.85
RNU6-290P-201ENST00000365212 DSG3P32926 999 aa9.67□□□□□ -0.86
RNU6-290P-201ENST00000365212 APLP2Q06481 763 aa9.58□□□□□ -0.88
RNU6-290P-201ENST00000365212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.57□□□□□ -0.88
RNU6-290P-201ENST00000365212 TRHP20396 242 aaPredicted RBP9.57□□□□□ -0.88
RNU6-290P-201ENST00000365212 HNRNPUL2Q1KMD3 747 aaKnown RBP9.57□□□□□ -0.88
RNU6-290P-201ENST00000365212 ZNF219Q9P2Y4 722 aaPredicted RBP9.54□□□□□ -0.88
RNU6-290P-201ENST00000365212 SAMD1Q6SPF0 538 aaPredicted RBP9.53□□□□□ -0.88
RNU6-290P-201ENST00000365212 ABCB7O75027 752 aa9.52□□□□□ -0.89
RNU6-290P-201ENST00000365212 SLC4A1APQ9BWU0 796 aaKnown RBP9.5□□□□□ -0.89
RNU6-290P-201ENST00000365212 MYCNP04198 464 aaPredicted RBP9.49□□□□□ -0.89
RNU6-290P-201ENST00000365212 FOXD4L1Q9NU39 408 aa9.4□□□□□ -0.9
RNU6-290P-201ENST00000365212 POLA2Q14181 598 aa9.3□□□□□ -0.92
RNU6-290P-201ENST00000365212 ZBTB22O15209 634 aa9.29□□□□□ -0.92
RNU6-290P-201ENST00000365212 ATF5Q9Y2D1 282 aaPredicted RBP9.28□□□□□ -0.92
RNU6-290P-201ENST00000365212 POTEHQ6S545 545 aa9.25□□□□□ -0.93
RNU6-290P-201ENST00000365212 RBM42Q9BTD8 480 aaKnown RBP9.21□□□□□ -0.94
RNU6-290P-201ENST00000365212 ZBTB12Q9Y330 459 aaPredicted RBP9.1□□□□□ -0.95
RNU6-290P-201ENST00000365212 ATXN8OSP0DMR3 200 aa9.08□□□□□ -0.96
RNU6-290P-201ENST00000365212 OSCARQ8IYS5 282 aa9.05□□□□□ -0.96
RNU6-290P-201ENST00000365212 CHRDL2Q6WN34 429 aa9.02□□□□□ -0.97
RNU6-290P-201ENST00000365212 AKT1S1Q96B36 256 aa9□□□□□ -0.97
RNU6-290P-201ENST00000365212 REM2Q8IYK8 340 aaPredicted RBP8.92□□□□□ -0.98
RNU6-290P-201ENST00000365212 FBLN2P98095 1184 aa8.88□□□□□ -0.99
RNU6-290P-201ENST00000365212 MKRN4PQ13434 485 aaPredicted RBP8.86□□□□□ -0.99
RNU6-290P-201ENST00000365212 PITPNM1O00562 1244 aa8.85□□□□□ -0.99
RNU6-290P-201ENST00000365212 SPDYE2BA6NHP3 402 aa8.84□□□□□ -0.99
RNU6-290P-201ENST00000365212 SPDYE6P0CI01 402 aa8.84□□□□□ -0.99
RNU6-290P-201ENST00000365212 SPDYE2Q495Y8 402 aa8.84□□□□□ -0.99
RNU6-290P-201ENST00000365212 CSRNP3Q8WYN3 585 aa8.84□□□□□ -0.99
RNU6-290P-201ENST00000365212 PIP4P2Q8N4L2 257 aa8.82□□□□□ -1
RNU6-290P-201ENST00000365212 FXR2P51116 673 aaKnown RBP eCLIP8.75□□□□□ -1.01
RNU6-290P-201ENST00000365212 EHMT2Q96KQ7 1210 aa8.74□□□□□ -1.01
RNU6-290P-201ENST00000365212 SSUH2Q9Y2M2 353 aa8.74□□□□□ -1.01
RNU6-290P-201ENST00000365212 ZNF692Q9BU19 519 aaPredicted RBP8.72□□□□□ -1.01
RNU6-290P-201ENST00000365212 SPDYE1Q8NFV5 336 aaPredicted RBP8.67□□□□□ -1.02
RNU6-290P-201ENST00000365212 SP7Q8TDD2 431 aaPredicted RBP8.67□□□□□ -1.02
RNU6-290P-201ENST00000365212 CLEC11AQ9Y240 323 aa8.66□□□□□ -1.02
RNU6-290P-201ENST00000365212 HAX1O00165 279 aa8.62□□□□□ -1.03
RNU6-290P-201ENST00000365212 PRKAR2AP13861 404 aaKnown RBP8.61□□□□□ -1.03
RNU6-290P-201ENST00000365212 PABPN1Q86U42 306 aaKnown RBP eCLIP8.61□□□□□ -1.03
RNU6-290P-201ENST00000365212 EVX2Q03828 476 aa8.55□□□□□ -1.04
RNU6-290P-201ENST00000365212 CHADLQ6NUI6 762 aa8.53□□□□□ -1.04
RNU6-290P-201ENST00000365212 PRR29P0C7W0 189 aa8.51□□□□□ -1.05
RNU6-290P-201ENST00000365212 C19orf67A6NJJ6 358 aa8.48□□□□□ -1.05
RNU6-290P-201ENST00000365212 SPDYE4A6NLX3 237 aa8.42□□□□□ -1.06
RNU6-290P-201ENST00000365212 FARP1Q9Y4F1 1045 aaPredicted RBP8.38□□□□□ -1.07
RNU6-290P-201ENST00000365212 GABBR2O75899 941 aa8.34□□□□□ -1.07
RNU6-290P-201ENST00000365212 STAG3Q9UJ98 1225 aa8.34□□□□□ -1.07
RNU6-290P-201ENST00000365212 CD44P16070 742 aaKnown RBP8.33□□□□□ -1.08
RNU6-290P-201ENST00000365212 CREBZFQ9NS37 354 aa8.33□□□□□ -1.08
RNU6-290P-201ENST00000365212 PROM2Q8N271 834 aa8.23□□□□□ -1.09
RNU6-290P-201ENST00000365212 ZNF579Q8NAF0 562 aaKnown RBP8.21□□□□□ -1.1
RNU6-290P-201ENST00000365212 ZRANB1Q9UGI0 708 aa8.21□□□□□ -1.1
RNU6-290P-201ENST00000365212 POTEIP0CG38 1075 aa8.19□□□□□ -1.1
RNU6-290P-201ENST00000365212 MNX1P50219 401 aaPredicted RBP8.19□□□□□ -1.1
RNU6-290P-201ENST00000365212 CLCN6P51797 869 aa8.16□□□□□ -1.1
RNU6-290P-201ENST00000365212 NPM1P06748 294 aaKnown RBP eCLIP8.13□□□□□ -1.11
RNU6-290P-201ENST00000365212 PHF12Q96QT6 1004 aa8.13□□□□□ -1.11
RNU6-290P-201ENST00000365212 GALR2O43603 387 aaPredicted RBP8.12□□□□□ -1.11
RNU6-290P-201ENST00000365212 PAK3O75914 559 aaPredicted RBP8.12□□□□□ -1.11
RNU6-290P-201ENST00000365212 LHX8Q68G74 356 aa8.12□□□□□ -1.11
RNU6-290P-201ENST00000365212 DCBLD2Q96PD2 775 aa8.1□□□□□ -1.11
RNU6-290P-201ENST00000365212 FKBP8Q14318 412 aa8.02□□□□□ -1.13
RNU6-290P-201ENST00000365212 MS4A3Q96HJ5 214 aa8.02□□□□□ -1.13
RNU6-290P-201ENST00000365212 TSPYL2Q9H2G4 693 aaPredicted RBP8.02□□□□□ -1.13
RNU6-290P-201ENST00000365212 MIER1Q8N108 512 aa8□□□□□ -1.13
RNU6-290P-201ENST00000365212 CCDC61Q9Y6R9 512 aa7.99□□□□□ -1.13
RNU6-290P-201ENST00000365212 PLEKHG5O94827 1062 aa7.98□□□□□ -1.13
RNU6-290P-201ENST00000365212 RASEFQ8IZ41 740 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms