RNA–Protein interactions for RNA: ENST00000365040.1

RNU1-140P-201, Transcript of RNA, U1 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU1-140P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-140P-201ENST00000365040 AEBP2Q6ZN18 517 aaPredicted RBP12.23□□□□□ -0.45
RNU1-140P-201ENST00000365040 CHIC1Q5VXU3 224 aa12.21□□□□□ -0.45
RNU1-140P-201ENST00000365040 PHF23Q9BUL5 403 aaPredicted RBP10.64□□□□□ -0.71
RNU1-140P-201ENST00000365040 SENP3Q9H4L4 574 aaPredicted RBP10.52□□□□□ -0.73
RNU1-140P-201ENST00000365040 PLPPR3Q6T4P5 718 aa10.03□□□□□ -0.8
RNU1-140P-201ENST00000365040 FOXD1Q16676 465 aa9.62□□□□□ -0.87
RNU1-140P-201ENST00000365040 ADRA2BP18089 450 aa9.32□□□□□ -0.92
RNU1-140P-201ENST00000365040 PPP6R1Q9UPN7 881 aa9.3□□□□□ -0.92
RNU1-140P-201ENST00000365040 PIAS4Q8N2W9 510 aaPredicted RBP9.16□□□□□ -0.94
RNU1-140P-201ENST00000365040 MSH5O43196 834 aa8.96□□□□□ -0.98
RNU1-140P-201ENST00000365040 PPP4R3CPQ6ZMV5 832 aa8.78□□□□□ -1
RNU1-140P-201ENST00000365040 SCAF1Q9H7N4 1312 aaKnown RBP8.72□□□□□ -1.01
RNU1-140P-201ENST00000365040 KCNA4P22459 653 aa8.7□□□□□ -1.02
RNU1-140P-201ENST00000365040 NCBP3Q53F19 620 aaKnown RBP8.7□□□□□ -1.02
RNU1-140P-201ENST00000365040 CNKSR2Q8WXI2 1034 aa8.57□□□□□ -1.04
RNU1-140P-201ENST00000365040 NPM3O75607 178 aaKnown RBP8.47□□□□□ -1.05
RNU1-140P-201ENST00000365040 DMRT2Q9Y5R5 561 aa8.39□□□□□ -1.07
RNU1-140P-201ENST00000365040 SLC4A1APQ9BWU0 796 aaKnown RBP8.37□□□□□ -1.07
RNU1-140P-201ENST00000365040 RNF216Q9NWF9 866 aaPredicted RBP8.37□□□□□ -1.07
RNU1-140P-201ENST00000365040 MAPK8IP2Q13387 824 aaPredicted RBP8.36□□□□□ -1.07
RNU1-140P-201ENST00000365040 DNAJC5BQ9UF47 199 aa8.36□□□□□ -1.07
RNU1-140P-201ENST00000365040 HOXD11P31277 338 aaPredicted RBP8.28□□□□□ -1.08
RNU1-140P-201ENST00000365040 EHMT2Q96KQ7 1210 aa8.22□□□□□ -1.09
RNU1-140P-201ENST00000365040 CSRNP3Q8WYN3 585 aa8.08□□□□□ -1.12
RNU1-140P-201ENST00000365040 FOXD4L1Q9NU39 408 aa8.07□□□□□ -1.12
RNU1-140P-201ENST00000365040 ZBTB22O15209 634 aa7.97□□□□□ -1.13
RNU1-140P-201ENST00000365040 DCAF8L1A6NGE4 600 aa7.94□□□□□ -1.14
RNU1-140P-201ENST00000365040 SLC4A2P04920 1241 aa7.92□□□□□ -1.14
RNU1-140P-201ENST00000365040 MYCNP04198 464 aaPredicted RBP7.91□□□□□ -1.14
RNU1-140P-201ENST00000365040 NISCHQ9Y2I1 1504 aa7.87□□□□□ -1.15
RNU1-140P-201ENST00000365040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.85□□□□□ -1.15
RNU1-140P-201ENST00000365040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.84□□□□□ -1.15
RNU1-140P-201ENST00000365040 ATXN8OSP0DMR3 200 aa7.84□□□□□ -1.15
RNU1-140P-201ENST00000365040 HNRNPUL2Q1KMD3 747 aaKnown RBP7.84□□□□□ -1.15
RNU1-140P-201ENST00000365040 APLP2Q06481 763 aa7.77□□□□□ -1.17
RNU1-140P-201ENST00000365040 SAMD1Q6SPF0 538 aaPredicted RBP7.77□□□□□ -1.17
RNU1-140P-201ENST00000365040 POTEDQ86YR6 584 aa7.77□□□□□ -1.17
RNU1-140P-201ENST00000365040 U3KPZ7 1027 aaPredicted RBP7.73□□□□□ -1.17
RNU1-140P-201ENST00000365040 RNF39Q9H2S5 420 aa7.62□□□□□ -1.19
RNU1-140P-201ENST00000365040 C1QBPQ07021 282 aaKnown RBP7.6□□□□□ -1.19
RNU1-140P-201ENST00000365040 ZNF219Q9P2Y4 722 aaPredicted RBP7.55□□□□□ -1.2
RNU1-140P-201ENST00000365040 ATF5Q9Y2D1 282 aaPredicted RBP7.51□□□□□ -1.21
RNU1-140P-201ENST00000365040 CAPN15O75808 1086 aa7.43□□□□□ -1.22
RNU1-140P-201ENST00000365040 SPINK5Q9NQ38 1064 aaPredicted RBP7.41□□□□□ -1.22
RNU1-140P-201ENST00000365040 TRHP20396 242 aaPredicted RBP7.4□□□□□ -1.22
RNU1-140P-201ENST00000365040 ZBTB12Q9Y330 459 aaPredicted RBP7.4□□□□□ -1.22
RNU1-140P-201ENST00000365040 FBLN2P98095 1184 aa7.37□□□□□ -1.23
RNU1-140P-201ENST00000365040 POLA2Q14181 598 aa7.32□□□□□ -1.24
RNU1-140P-201ENST00000365040 FKBP8Q14318 412 aa7.32□□□□□ -1.24
RNU1-140P-201ENST00000365040 CACNB1Q02641 598 aaPredicted RBP7.29□□□□□ -1.24
RNU1-140P-201ENST00000365040 CCDC180Q9P1Z9 1646 aa7.28□□□□□ -1.24
RNU1-140P-201ENST00000365040 DSG3P32926 999 aa7.28□□□□□ -1.24
RNU1-140P-201ENST00000365040 ABCB7O75027 752 aa7.24□□□□□ -1.25
RNU1-140P-201ENST00000365040 MKRN4PQ13434 485 aaPredicted RBP7.23□□□□□ -1.25
RNU1-140P-201ENST00000365040 SPDYE4A6NLX3 237 aa7.21□□□□□ -1.26
RNU1-140P-201ENST00000365040 ABCC9O60706 1549 aa7.19□□□□□ -1.26
RNU1-140P-201ENST00000365040 PROM2Q8N271 834 aa7.16□□□□□ -1.26
RNU1-140P-201ENST00000365040 SPDYE2BA6NHP3 402 aa7.15□□□□□ -1.26
RNU1-140P-201ENST00000365040 SPDYE6P0CI01 402 aa7.15□□□□□ -1.26
RNU1-140P-201ENST00000365040 SPDYE2Q495Y8 402 aa7.15□□□□□ -1.26
RNU1-140P-201ENST00000365040 FBXO3Q9UK99 471 aa7.15□□□□□ -1.26
RNU1-140P-201ENST00000365040 OSCARQ8IYS5 282 aa7.09□□□□□ -1.27
RNU1-140P-201ENST00000365040 SSUH2Q9Y2M2 353 aa7.08□□□□□ -1.28
RNU1-140P-201ENST00000365040 ZNF692Q9BU19 519 aaPredicted RBP7.07□□□□□ -1.28
RNU1-140P-201ENST00000365040 RBM42Q9BTD8 480 aaKnown RBP7.06□□□□□ -1.28
RNU1-140P-201ENST00000365040 AMER1Q5JTC6 1135 aaPredicted RBP7.05□□□□□ -1.28
RNU1-140P-201ENST00000365040 STAG3Q9UJ98 1225 aa7□□□□□ -1.29
RNU1-140P-201ENST00000365040 VASPP50552 380 aaPredicted RBP6.97□□□□□ -1.29
RNU1-140P-201ENST00000365040 PABPN1Q86U42 306 aaKnown RBP eCLIP6.96□□□□□ -1.3
RNU1-140P-201ENST00000365040 AKT1S1Q96B36 256 aa6.96□□□□□ -1.3
RNU1-140P-201ENST00000365040 RB1CC1Q8TDY2 1594 aa6.94□□□□□ -1.3
RNU1-140P-201ENST00000365040 SPDYE1Q8NFV5 336 aaPredicted RBP6.9□□□□□ -1.3
RNU1-140P-201ENST00000365040 PLEKHG5O94827 1062 aa6.89□□□□□ -1.31
RNU1-140P-201ENST00000365040 RTN4Q9NQC3 1192 aaKnown RBP6.87□□□□□ -1.31
RNU1-140P-201ENST00000365040 ZBTB47Q9UFB7 747 aaPredicted RBP6.87□□□□□ -1.31
RNU1-140P-201ENST00000365040 NACADO15069 1562 aa6.85□□□□□ -1.31
RNU1-140P-201ENST00000365040 PLCD3Q8N3E9 789 aa6.83□□□□□ -1.32
RNU1-140P-201ENST00000365040 IFNLR1Q8IU57 520 aaPredicted RBP6.82□□□□□ -1.32
RNU1-140P-201ENST00000365040 REM2Q8IYK8 340 aaPredicted RBP6.81□□□□□ -1.32
RNU1-140P-201ENST00000365040 MIER1Q8N108 512 aa6.79□□□□□ -1.32
RNU1-140P-201ENST00000365040 SPOCK2Q92563 424 aa6.79□□□□□ -1.32
RNU1-140P-201ENST00000365040 KLHL34Q8N239 644 aa6.78□□□□□ -1.32
RNU1-140P-201ENST00000365040 UNC13AQ9UPW8 1703 aa6.77□□□□□ -1.33
RNU1-140P-201ENST00000365040 PRR29P0C7W0 189 aa6.76□□□□□ -1.33
RNU1-140P-201ENST00000365040 CLEC11AQ9Y240 323 aa6.75□□□□□ -1.33
RNU1-140P-201ENST00000365040 MYO15BQ96JP2 1530 aa6.75□□□□□ -1.33
RNU1-140P-201ENST00000365040 PITPNM1O00562 1244 aa6.73□□□□□ -1.33
RNU1-140P-201ENST00000365040 SHROOM4Q9ULL8 1493 aa6.73□□□□□ -1.33
RNU1-140P-201ENST00000365040 TRIM41Q8WV44 630 aa6.72□□□□□ -1.33
RNU1-140P-201ENST00000365040 NPM1P06748 294 aaKnown RBP eCLIP6.67□□□□□ -1.34
RNU1-140P-201ENST00000365040 GSE1Q14687 1217 aa6.67□□□□□ -1.34
RNU1-140P-201ENST00000365040 CREBZFQ9NS37 354 aa6.67□□□□□ -1.34
RNU1-140P-201ENST00000365040 PKD2Q13563 968 aa6.65□□□□□ -1.34
RNU1-140P-201ENST00000365040 BICRAQ9NZM4 1560 aa6.65□□□□□ -1.35
RNU1-140P-201ENST00000365040 FAM212AQ96EL1 285 aa6.64□□□□□ -1.35
RNU1-140P-201ENST00000365040 ECM2O94769 699 aaPredicted RBP6.63□□□□□ -1.35
RNU1-140P-201ENST00000365040 MNX1P50219 401 aaPredicted RBP6.63□□□□□ -1.35
RNU1-140P-201ENST00000365040 NUBP1P53384 320 aa6.61□□□□□ -1.35
RNU1-140P-201ENST00000365040 FXR2P51116 673 aaKnown RBP eCLIP6.6□□□□□ -1.35
RNU1-140P-201ENST00000365040 CHRDL2Q6WN34 429 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms