RNA–Protein interactions for RNA: ENST00000364721.1

RNU6-99P-201, Transcript of RNA, U6 small nuclear 99, pseudogene, humanhuman

BASIC

Gene RNU6-99P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-99P-201ENST00000364721 AEBP2Q6ZN18 517 aaPredicted RBP20.22■□□□□ 0.83
RNU6-99P-201ENST00000364721 CHIC1Q5VXU3 224 aa19.06■□□□□ 0.64
RNU6-99P-201ENST00000364721 SENP3Q9H4L4 574 aaPredicted RBP17.26■□□□□ 0.35
RNU6-99P-201ENST00000364721 PHF23Q9BUL5 403 aaPredicted RBP16.99■□□□□ 0.31
RNU6-99P-201ENST00000364721 FOXD1Q16676 465 aa16.1■□□□□ 0.17
RNU6-99P-201ENST00000364721 PLPPR3Q6T4P5 718 aa15.14■□□□□ 0.01
RNU6-99P-201ENST00000364721 MSH5O43196 834 aa15.12■□□□□ 0.01
RNU6-99P-201ENST00000364721 POTEDQ86YR6 584 aa15□□□□□ -0.01
RNU6-99P-201ENST00000364721 PIAS4Q8N2W9 510 aaPredicted RBP14.96□□□□□ -0.01
RNU6-99P-201ENST00000364721 PPP6R1Q9UPN7 881 aa14.94□□□□□ -0.02
RNU6-99P-201ENST00000364721 ADRA2BP18089 450 aa14.85□□□□□ -0.03
RNU6-99P-201ENST00000364721 DMRT2Q9Y5R5 561 aa13.69□□□□□ -0.22
RNU6-99P-201ENST00000364721 MAPK8IP2Q13387 824 aaPredicted RBP13.68□□□□□ -0.22
RNU6-99P-201ENST00000364721 SCAF1Q9H7N4 1312 aaKnown RBP13.6□□□□□ -0.23
RNU6-99P-201ENST00000364721 PPP4R3CPQ6ZMV5 832 aa13.24□□□□□ -0.29
RNU6-99P-201ENST00000364721 HOXD11P31277 338 aaPredicted RBP13.14□□□□□ -0.31
RNU6-99P-201ENST00000364721 CNKSR2Q8WXI2 1034 aa13.05□□□□□ -0.32
RNU6-99P-201ENST00000364721 CACNB1Q02641 598 aaPredicted RBP12.99□□□□□ -0.33
RNU6-99P-201ENST00000364721 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
RNU6-99P-201ENST00000364721 DCAF8L1A6NGE4 600 aa12.97□□□□□ -0.33
RNU6-99P-201ENST00000364721 RNF39Q9H2S5 420 aa12.92□□□□□ -0.34
RNU6-99P-201ENST00000364721 DNAJC5BQ9UF47 199 aa12.8□□□□□ -0.36
RNU6-99P-201ENST00000364721 C1QBPQ07021 282 aaKnown RBP12.71□□□□□ -0.37
RNU6-99P-201ENST00000364721 NCBP3Q53F19 620 aaKnown RBP12.68□□□□□ -0.38
RNU6-99P-201ENST00000364721 NPM3O75607 178 aaKnown RBP12.52□□□□□ -0.41
RNU6-99P-201ENST00000364721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.41□□□□□ -0.42
RNU6-99P-201ENST00000364721 U3KPZ7 1027 aaPredicted RBP12.21□□□□□ -0.45
RNU6-99P-201ENST00000364721 KCNA4P22459 653 aa12.13□□□□□ -0.47
RNU6-99P-201ENST00000364721 SPINK5Q9NQ38 1064 aaPredicted RBP12.04□□□□□ -0.48
RNU6-99P-201ENST00000364721 DSG3P32926 999 aa12.03□□□□□ -0.48
RNU6-99P-201ENST00000364721 SLC4A2P04920 1241 aa12.01□□□□□ -0.49
RNU6-99P-201ENST00000364721 CAPN15O75808 1086 aa11.97□□□□□ -0.49
RNU6-99P-201ENST00000364721 APLP2Q06481 763 aa11.83□□□□□ -0.52
RNU6-99P-201ENST00000364721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.8□□□□□ -0.52
RNU6-99P-201ENST00000364721 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
RNU6-99P-201ENST00000364721 ZNF219Q9P2Y4 722 aaPredicted RBP11.78□□□□□ -0.52
RNU6-99P-201ENST00000364721 TRHP20396 242 aaPredicted RBP11.74□□□□□ -0.53
RNU6-99P-201ENST00000364721 SAMD1Q6SPF0 538 aaPredicted RBP11.73□□□□□ -0.53
RNU6-99P-201ENST00000364721 POTEHQ6S545 545 aa11.71□□□□□ -0.53
RNU6-99P-201ENST00000364721 ABCB7O75027 752 aa11.67□□□□□ -0.54
RNU6-99P-201ENST00000364721 MYCNP04198 464 aaPredicted RBP11.59□□□□□ -0.55
RNU6-99P-201ENST00000364721 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
RNU6-99P-201ENST00000364721 POLA2Q14181 598 aa11.44□□□□□ -0.58
RNU6-99P-201ENST00000364721 SLC4A1APQ9BWU0 796 aaKnown RBP11.4□□□□□ -0.58
RNU6-99P-201ENST00000364721 FOXD4L1Q9NU39 408 aa11.37□□□□□ -0.59
RNU6-99P-201ENST00000364721 ATF5Q9Y2D1 282 aaPredicted RBP11.31□□□□□ -0.6
RNU6-99P-201ENST00000364721 CHRDL2Q6WN34 429 aa11.26□□□□□ -0.61
RNU6-99P-201ENST00000364721 ZBTB12Q9Y330 459 aaPredicted RBP11.23□□□□□ -0.61
RNU6-99P-201ENST00000364721 ZBTB22O15209 634 aa11.18□□□□□ -0.62
RNU6-99P-201ENST00000364721 AKT1S1Q96B36 256 aa11.18□□□□□ -0.62
RNU6-99P-201ENST00000364721 ATXN8OSP0DMR3 200 aa11.1□□□□□ -0.63
RNU6-99P-201ENST00000364721 REM2Q8IYK8 340 aaPredicted RBP11.07□□□□□ -0.64
RNU6-99P-201ENST00000364721 OSCARQ8IYS5 282 aa11.07□□□□□ -0.64
RNU6-99P-201ENST00000364721 PIP4P2Q8N4L2 257 aa10.97□□□□□ -0.65
RNU6-99P-201ENST00000364721 PITPNM1O00562 1244 aa10.94□□□□□ -0.66
RNU6-99P-201ENST00000364721 SP7Q8TDD2 431 aaPredicted RBP10.92□□□□□ -0.66
RNU6-99P-201ENST00000364721 FXR2P51116 673 aaKnown RBP eCLIP10.91□□□□□ -0.66
RNU6-99P-201ENST00000364721 SPDYE2BA6NHP3 402 aa10.88□□□□□ -0.67
RNU6-99P-201ENST00000364721 SPDYE6P0CI01 402 aa10.88□□□□□ -0.67
RNU6-99P-201ENST00000364721 SPDYE2Q495Y8 402 aa10.88□□□□□ -0.67
RNU6-99P-201ENST00000364721 FBLN2P98095 1184 aa10.85□□□□□ -0.67
RNU6-99P-201ENST00000364721 MKRN4PQ13434 485 aaPredicted RBP10.81□□□□□ -0.68
RNU6-99P-201ENST00000364721 HAX1O00165 279 aa10.75□□□□□ -0.69
RNU6-99P-201ENST00000364721 SSUH2Q9Y2M2 353 aa10.75□□□□□ -0.69
RNU6-99P-201ENST00000364721 SPDYE1Q8NFV5 336 aaPredicted RBP10.7□□□□□ -0.7
RNU6-99P-201ENST00000364721 EVX2Q03828 476 aa10.67□□□□□ -0.7
RNU6-99P-201ENST00000364721 ZNF692Q9BU19 519 aaPredicted RBP10.67□□□□□ -0.7
RNU6-99P-201ENST00000364721 PRKAR2AP13861 404 aaKnown RBP10.63□□□□□ -0.71
RNU6-99P-201ENST00000364721 CLEC11AQ9Y240 323 aa10.61□□□□□ -0.71
RNU6-99P-201ENST00000364721 C19orf67A6NJJ6 358 aa10.57□□□□□ -0.72
RNU6-99P-201ENST00000364721 PABPN1Q86U42 306 aaKnown RBP eCLIP10.52□□□□□ -0.73
RNU6-99P-201ENST00000364721 CSRNP3Q8WYN3 585 aa10.52□□□□□ -0.73
RNU6-99P-201ENST00000364721 PRR29P0C7W0 189 aa10.46□□□□□ -0.73
RNU6-99P-201ENST00000364721 CHADLQ6NUI6 762 aa10.45□□□□□ -0.74
RNU6-99P-201ENST00000364721 GABBR2O75899 941 aa10.41□□□□□ -0.74
RNU6-99P-201ENST00000364721 FARP1Q9Y4F1 1045 aaPredicted RBP10.33□□□□□ -0.76
RNU6-99P-201ENST00000364721 CD44P16070 742 aaKnown RBP10.28□□□□□ -0.76
RNU6-99P-201ENST00000364721 CLCN6P51797 869 aa10.27□□□□□ -0.77
RNU6-99P-201ENST00000364721 POTEIP0CG38 1075 aa10.22□□□□□ -0.77
RNU6-99P-201ENST00000364721 LHX8Q68G74 356 aa10.22□□□□□ -0.77
RNU6-99P-201ENST00000364721 CREBZFQ9NS37 354 aa10.22□□□□□ -0.77
RNU6-99P-201ENST00000364721 STAG3Q9UJ98 1225 aa10.22□□□□□ -0.77
RNU6-99P-201ENST00000364721 EHMT2Q96KQ7 1210 aa10.19□□□□□ -0.78
RNU6-99P-201ENST00000364721 SPDYE4A6NLX3 237 aa10.18□□□□□ -0.78
RNU6-99P-201ENST00000364721 ZNF579Q8NAF0 562 aaKnown RBP10.18□□□□□ -0.78
RNU6-99P-201ENST00000364721 ZRANB1Q9UGI0 708 aa10.1□□□□□ -0.79
RNU6-99P-201ENST00000364721 MNX1P50219 401 aaPredicted RBP10.07□□□□□ -0.8
RNU6-99P-201ENST00000364721 DCBLD2Q96PD2 775 aa10.05□□□□□ -0.8
RNU6-99P-201ENST00000364721 PROM2Q8N271 834 aa10.03□□□□□ -0.8
RNU6-99P-201ENST00000364721 GALR2O43603 387 aaPredicted RBP10.02□□□□□ -0.81
RNU6-99P-201ENST00000364721 NPM1P06748 294 aaKnown RBP eCLIP9.99□□□□□ -0.81
RNU6-99P-201ENST00000364721 PAK3O75914 559 aaPredicted RBP9.97□□□□□ -0.81
RNU6-99P-201ENST00000364721 PHF12Q96QT6 1004 aa9.96□□□□□ -0.82
RNU6-99P-201ENST00000364721 POTEB2H3BUK9 544 aa9.86□□□□□ -0.83
RNU6-99P-201ENST00000364721 OTUD5Q96G74 571 aa9.86□□□□□ -0.83
RNU6-99P-201ENST00000364721 ASTLQ6HA08 431 aaPredicted RBP9.85□□□□□ -0.83
RNU6-99P-201ENST00000364721 PELP1Q8IZL8 1130 aaKnown RBP9.85□□□□□ -0.83
RNU6-99P-201ENST00000364721 MS4A3Q96HJ5 214 aa9.83□□□□□ -0.84
RNU6-99P-201ENST00000364721 CCDC61Q9Y6R9 512 aa9.82□□□□□ -0.84
RNU6-99P-201ENST00000364721 ATMINO43313 823 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms