RNA–Protein interactions for RNA: ENST00000364709.1

RNU6-343P-201, Transcript of RNA, U6 small nuclear 343, pseudogene, humanhuman

BASIC

Gene RNU6-343P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-343P-201ENST00000364709 AEBP2Q6ZN18 517 aaPredicted RBP17.35■□□□□ 0.37
RNU6-343P-201ENST00000364709 CHIC1Q5VXU3 224 aa16.8■□□□□ 0.28
RNU6-343P-201ENST00000364709 PHF23Q9BUL5 403 aaPredicted RBP14.86□□□□□ -0.03
RNU6-343P-201ENST00000364709 SENP3Q9H4L4 574 aaPredicted RBP14.57□□□□□ -0.08
RNU6-343P-201ENST00000364709 FOXD1Q16676 465 aa13.63□□□□□ -0.23
RNU6-343P-201ENST00000364709 PLPPR3Q6T4P5 718 aa13.54□□□□□ -0.24
RNU6-343P-201ENST00000364709 PPP6R1Q9UPN7 881 aa13.14□□□□□ -0.31
RNU6-343P-201ENST00000364709 ADRA2BP18089 450 aa13.09□□□□□ -0.31
RNU6-343P-201ENST00000364709 PIAS4Q8N2W9 510 aaPredicted RBP12.77□□□□□ -0.37
RNU6-343P-201ENST00000364709 MSH5O43196 834 aa12.46□□□□□ -0.41
RNU6-343P-201ENST00000364709 PPP4R3CPQ6ZMV5 832 aa11.98□□□□□ -0.49
RNU6-343P-201ENST00000364709 KCNA4P22459 653 aa11.93□□□□□ -0.5
RNU6-343P-201ENST00000364709 MAPK8IP2Q13387 824 aaPredicted RBP11.92□□□□□ -0.5
RNU6-343P-201ENST00000364709 NCBP3Q53F19 620 aaKnown RBP11.81□□□□□ -0.52
RNU6-343P-201ENST00000364709 SCAF1Q9H7N4 1312 aaKnown RBP11.79□□□□□ -0.52
RNU6-343P-201ENST00000364709 DMRT2Q9Y5R5 561 aa11.67□□□□□ -0.54
RNU6-343P-201ENST00000364709 CNKSR2Q8WXI2 1034 aa11.61□□□□□ -0.55
RNU6-343P-201ENST00000364709 EHMT2Q96KQ7 1210 aa11.55□□□□□ -0.56
RNU6-343P-201ENST00000364709 POTEDQ86YR6 584 aa11.54□□□□□ -0.56
RNU6-343P-201ENST00000364709 NPM3O75607 178 aaKnown RBP11.51□□□□□ -0.57
RNU6-343P-201ENST00000364709 SLC4A1APQ9BWU0 796 aaKnown RBP11.51□□□□□ -0.57
RNU6-343P-201ENST00000364709 HOXD11P31277 338 aaPredicted RBP11.42□□□□□ -0.58
RNU6-343P-201ENST00000364709 RNF216Q9NWF9 866 aaPredicted RBP11.42□□□□□ -0.58
RNU6-343P-201ENST00000364709 DNAJC5BQ9UF47 199 aa11.16□□□□□ -0.62
RNU6-343P-201ENST00000364709 DCAF8L1A6NGE4 600 aa11.11□□□□□ -0.63
RNU6-343P-201ENST00000364709 CSRNP3Q8WYN3 585 aa11.11□□□□□ -0.63
RNU6-343P-201ENST00000364709 FOXD4L1Q9NU39 408 aa10.97□□□□□ -0.65
RNU6-343P-201ENST00000364709 SLC4A2P04920 1241 aa10.93□□□□□ -0.66
RNU6-343P-201ENST00000364709 ZBTB22O15209 634 aa10.89□□□□□ -0.67
RNU6-343P-201ENST00000364709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.81□□□□□ -0.68
RNU6-343P-201ENST00000364709 RNF39Q9H2S5 420 aa10.76□□□□□ -0.69
RNU6-343P-201ENST00000364709 U3KPZ7 1027 aaPredicted RBP10.73□□□□□ -0.69
RNU6-343P-201ENST00000364709 MYCNP04198 464 aaPredicted RBP10.69□□□□□ -0.7
RNU6-343P-201ENST00000364709 C1QBPQ07021 282 aaKnown RBP10.56□□□□□ -0.72
RNU6-343P-201ENST00000364709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.54□□□□□ -0.72
RNU6-343P-201ENST00000364709 HNRNPUL2Q1KMD3 747 aaKnown RBP10.54□□□□□ -0.72
RNU6-343P-201ENST00000364709 ATXN8OSP0DMR3 200 aa10.53□□□□□ -0.72
RNU6-343P-201ENST00000364709 SAMD1Q6SPF0 538 aaPredicted RBP10.48□□□□□ -0.73
RNU6-343P-201ENST00000364709 SPINK5Q9NQ38 1064 aaPredicted RBP10.46□□□□□ -0.73
RNU6-343P-201ENST00000364709 CACNB1Q02641 598 aaPredicted RBP10.45□□□□□ -0.74
RNU6-343P-201ENST00000364709 APLP2Q06481 763 aa10.43□□□□□ -0.74
RNU6-343P-201ENST00000364709 ATF5Q9Y2D1 282 aaPredicted RBP10.43□□□□□ -0.74
RNU6-343P-201ENST00000364709 CAPN15O75808 1086 aa10.32□□□□□ -0.76
RNU6-343P-201ENST00000364709 TRHP20396 242 aaPredicted RBP10.28□□□□□ -0.76
RNU6-343P-201ENST00000364709 DSG3P32926 999 aa10.23□□□□□ -0.77
RNU6-343P-201ENST00000364709 ZNF219Q9P2Y4 722 aaPredicted RBP10.22□□□□□ -0.77
RNU6-343P-201ENST00000364709 ABCB7O75027 752 aa10.18□□□□□ -0.78
RNU6-343P-201ENST00000364709 FKBP8Q14318 412 aa10.17□□□□□ -0.78
RNU6-343P-201ENST00000364709 POLA2Q14181 598 aa10.12□□□□□ -0.79
RNU6-343P-201ENST00000364709 FBLN2P98095 1184 aa10.03□□□□□ -0.8
RNU6-343P-201ENST00000364709 MKRN4PQ13434 485 aaPredicted RBP9.96□□□□□ -0.82
RNU6-343P-201ENST00000364709 ZBTB12Q9Y330 459 aaPredicted RBP9.92□□□□□ -0.82
RNU6-343P-201ENST00000364709 SPDYE4A6NLX3 237 aa9.87□□□□□ -0.83
RNU6-343P-201ENST00000364709 AMER1Q5JTC6 1135 aaPredicted RBP9.8□□□□□ -0.84
RNU6-343P-201ENST00000364709 OSCARQ8IYS5 282 aa9.79□□□□□ -0.84
RNU6-343P-201ENST00000364709 FBXO3Q9UK99 471 aa9.79□□□□□ -0.84
RNU6-343P-201ENST00000364709 RTN4Q9NQC3 1192 aaKnown RBP9.68□□□□□ -0.86
RNU6-343P-201ENST00000364709 ZNF692Q9BU19 519 aaPredicted RBP9.65□□□□□ -0.86
RNU6-343P-201ENST00000364709 SPDYE2BA6NHP3 402 aa9.62□□□□□ -0.87
RNU6-343P-201ENST00000364709 SPDYE6P0CI01 402 aa9.62□□□□□ -0.87
RNU6-343P-201ENST00000364709 SPDYE2Q495Y8 402 aa9.62□□□□□ -0.87
RNU6-343P-201ENST00000364709 RBM42Q9BTD8 480 aaKnown RBP9.61□□□□□ -0.87
RNU6-343P-201ENST00000364709 SSUH2Q9Y2M2 353 aa9.61□□□□□ -0.87
RNU6-343P-201ENST00000364709 PROM2Q8N271 834 aa9.57□□□□□ -0.88
RNU6-343P-201ENST00000364709 VASPP50552 380 aaPredicted RBP9.56□□□□□ -0.88
RNU6-343P-201ENST00000364709 AKT1S1Q96B36 256 aa9.54□□□□□ -0.88
RNU6-343P-201ENST00000364709 REM2Q8IYK8 340 aaPredicted RBP9.51□□□□□ -0.89
RNU6-343P-201ENST00000364709 PABPN1Q86U42 306 aaKnown RBP eCLIP9.5□□□□□ -0.89
RNU6-343P-201ENST00000364709 STAG3Q9UJ98 1225 aa9.48□□□□□ -0.89
RNU6-343P-201ENST00000364709 KLHL34Q8N239 644 aa9.47□□□□□ -0.89
RNU6-343P-201ENST00000364709 PLCD3Q8N3E9 789 aa9.46□□□□□ -0.9
RNU6-343P-201ENST00000364709 PLEKHG5O94827 1062 aa9.45□□□□□ -0.9
RNU6-343P-201ENST00000364709 PITPNM1O00562 1244 aa9.41□□□□□ -0.9
RNU6-343P-201ENST00000364709 MIER1Q8N108 512 aa9.39□□□□□ -0.91
RNU6-343P-201ENST00000364709 DCAF8L2P0C7V8 631 aa9.38□□□□□ -0.91
RNU6-343P-201ENST00000364709 IFNLR1Q8IU57 520 aaPredicted RBP9.37□□□□□ -0.91
RNU6-343P-201ENST00000364709 SPDYE1Q8NFV5 336 aaPredicted RBP9.34□□□□□ -0.91
RNU6-343P-201ENST00000364709 SPOCK2Q92563 424 aa9.34□□□□□ -0.91
RNU6-343P-201ENST00000364709 ZBTB47Q9UFB7 747 aaPredicted RBP9.33□□□□□ -0.92
RNU6-343P-201ENST00000364709 CHRDL2Q6WN34 429 aa9.32□□□□□ -0.92
RNU6-343P-201ENST00000364709 CLEC11AQ9Y240 323 aa9.32□□□□□ -0.92
RNU6-343P-201ENST00000364709 SLC24A1O60721 1099 aa9.31□□□□□ -0.92
RNU6-343P-201ENST00000364709 FXR2P51116 673 aaKnown RBP eCLIP9.24□□□□□ -0.93
RNU6-343P-201ENST00000364709 PIP4P2Q8N4L2 257 aa9.22□□□□□ -0.93
RNU6-343P-201ENST00000364709 PRR29P0C7W0 189 aa9.21□□□□□ -0.94
RNU6-343P-201ENST00000364709 CIZ1Q9ULV3 898 aaPredicted RBP9.21□□□□□ -0.94
RNU6-343P-201ENST00000364709 ECM2O94769 699 aaPredicted RBP9.2□□□□□ -0.94
RNU6-343P-201ENST00000364709 CREBZFQ9NS37 354 aa9.19□□□□□ -0.94
RNU6-343P-201ENST00000364709 CHADLQ6NUI6 762 aa9.18□□□□□ -0.94
RNU6-343P-201ENST00000364709 PKD2Q13563 968 aa9.15□□□□□ -0.94
RNU6-343P-201ENST00000364709 PRKAR2AP13861 404 aaKnown RBP9.14□□□□□ -0.95
RNU6-343P-201ENST00000364709 MNX1P50219 401 aaPredicted RBP9.12□□□□□ -0.95
RNU6-343P-201ENST00000364709 GSE1Q14687 1217 aa9.09□□□□□ -0.95
RNU6-343P-201ENST00000364709 POTEHQ6S545 545 aa9.09□□□□□ -0.95
RNU6-343P-201ENST00000364709 TRIM41Q8WV44 630 aa9.09□□□□□ -0.95
RNU6-343P-201ENST00000364709 DCAF8Q5TAQ9 597 aa9.07□□□□□ -0.96
RNU6-343P-201ENST00000364709 FAM212AQ96EL1 285 aa9.06□□□□□ -0.96
RNU6-343P-201ENST00000364709 NPM1P06748 294 aaKnown RBP eCLIP9.05□□□□□ -0.96
RNU6-343P-201ENST00000364709 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.05□□□□□ -0.96
RNU6-343P-201ENST00000364709 FARP1Q9Y4F1 1045 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms